Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 SNORD58C-201ENST00000365223 64 ntBASIC2.03□□□□□ -2.08
HLA-DOAP06340 RNU6-163P-201ENST00000384396 106 ntBASIC2.03□□□□□ -2.08
HLA-DOAP06340 RNU6-296P-201ENST00000384608 107 ntBASIC2.03□□□□□ -2.08
HLA-DOAP06340 SNORA17.3-201ENST00000391159 129 ntBASIC2.03□□□□□ -2.08
HLA-DOAP06340 AC093850.1-201ENST00000454121 251 ntBASIC2.03□□□□□ -2.08
HLA-DOAP06340 AC055731.1-201ENST00000474387 401 ntBASIC2.03□□□□□ -2.08
HLA-DOAP06340 RNA5SP168-201ENST00000516642 112 ntBASIC2.03□□□□□ -2.08
HLA-DOAP06340 RNU2-19P-201ENST00000517288 84 ntBASIC2.03□□□□□ -2.08
HLA-DOAP06340 MIR3618-201ENST00000580330 88 ntBASIC2.03□□□□□ -2.08
HLA-DOAP06340 AP000553.5-201ENST00000641933 54 ntBASIC2.03□□□□□ -2.08
HLA-DOAP06340 Y_RNA.37-201ENST00000362606 108 ntBASIC2.02□□□□□ -2.09
HLA-DOAP06340 RNU6-457P-201ENST00000363999 107 ntBASIC2.02□□□□□ -2.09
HLA-DOAP06340 Y_RNA.494-201ENST00000384432 111 ntBASIC2.02□□□□□ -2.09
HLA-DOAP06340 MIR520A-201ENST00000384862 85 ntBASIC2.02□□□□□ -2.09
HLA-DOAP06340 RNU6-1064P-201ENST00000410626 104 ntBASIC2.02□□□□□ -2.09
HLA-DOAP06340 RNA5SP100-201ENST00000410903 110 ntBASIC2.02□□□□□ -2.09
HLA-DOAP06340 RNA5SP59-201ENST00000410922 110 ntBASIC2.02□□□□□ -2.09
HLA-DOAP06340 RN7SKP179-201ENST00000516126 217 ntBASIC2.02□□□□□ -2.09
HLA-DOAP06340 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.02□□□□□ -2.09
HLA-DOAP06340 AC121758.2-201ENST00000553271 193 ntBASIC2.02□□□□□ -2.09
HLA-DOAP06340 MIR3935-201ENST00000583472 104 ntBASIC2.02□□□□□ -2.09
HLA-DOAP06340 MIR5197-201ENST00000583721 112 ntBASIC2.02□□□□□ -2.09
HLA-DOAP06340 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.02□□□□□ -2.09
HLA-DOAP06340 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.02□□□□□ -2.09
HLA-DOAP06340 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.02□□□□□ -2.09
HLA-DOAP06340 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.02□□□□□ -2.09
HLA-DOAP06340 SNORD115-28-201ENST00000363931 81 ntBASIC2.01□□□□□ -2.09
HLA-DOAP06340 SNORA67.1-201ENST00000364749 141 ntBASIC2.01□□□□□ -2.09
HLA-DOAP06340 Y_RNA.366-201ENST00000365540 102 ntBASIC2.01□□□□□ -2.09
HLA-DOAP06340 RNU6-1056P-201ENST00000383996 107 ntBASIC2.01□□□□□ -2.09
HLA-DOAP06340 RNU6-476P-201ENST00000384726 107 ntBASIC2.01□□□□□ -2.09
HLA-DOAP06340 SNORA67.5-201ENST00000391036 107 ntBASIC2.01□□□□□ -2.09
HLA-DOAP06340 RN7SKP19-201ENST00000516016 252 ntBASIC2.01□□□□□ -2.09
HLA-DOAP06340 RNU6-919P-201ENST00000516731 104 ntBASIC2.01□□□□□ -2.09
HLA-DOAP06340 HSPE1P19-201ENST00000603327 295 ntBASIC2.01□□□□□ -2.09
HLA-DOAP06340 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
HLA-DOAP06340 SNORA2.2-201ENST00000365473 135 ntBASIC2□□□□□ -2.09
HLA-DOAP06340 RNU6-1144P-201ENST00000384247 104 ntBASIC2□□□□□ -2.09
HLA-DOAP06340 RNU6-1031P-201ENST00000384773 107 ntBASIC2□□□□□ -2.09
HLA-DOAP06340 MIR1263-201ENST00000408324 86 ntBASIC2□□□□□ -2.09
HLA-DOAP06340 RNA5SP57-201ENST00000459463 123 ntBASIC2□□□□□ -2.09
HLA-DOAP06340 RNU7-28P-201ENST00000516759 62 ntBASIC2□□□□□ -2.09
HLA-DOAP06340 MIR6895-201ENST00000613497 78 ntBASIC2□□□□□ -2.09
HLA-DOAP06340 AC134878.1-201ENST00000619901 243 ntBASIC2□□□□□ -2.09
HLA-DOAP06340 RNU6-647P-201ENST00000364243 107 ntBASIC1.99□□□□□ -2.09
HLA-DOAP06340 Y_RNA.338-201ENST00000365320 114 ntBASIC1.99□□□□□ -2.09
HLA-DOAP06340 RNU6-424P-201ENST00000384367 105 ntBASIC1.99□□□□□ -2.09
HLA-DOAP06340 MIR516B2-201ENST00000385190 85 ntBASIC1.99□□□□□ -2.09
HLA-DOAP06340 RNY4P18-201ENST00000391107 89 ntBASIC1.99□□□□□ -2.09
HLA-DOAP06340 SUMO2P12-201ENST00000405924 140 ntBASIC1.99□□□□□ -2.09
HLA-DOAP06340 RNA5SP489-201ENST00000410986 109 ntBASIC1.99□□□□□ -2.09
HLA-DOAP06340 AC069257.2-201ENST00000441819 155 ntBASIC1.99□□□□□ -2.09
HLA-DOAP06340 AC099513.1-201ENST00000490423 301 ntBASIC1.99□□□□□ -2.09
HLA-DOAP06340 SNORA31.17-201ENST00000516953 127 ntBASIC1.99□□□□□ -2.09
HLA-DOAP06340 AC021506.2-201ENST00000612354 169 ntBASIC1.99□□□□□ -2.09
HLA-DOAP06340 U1.36-201ENST00000620684 176 ntBASIC1.99□□□□□ -2.09
HLA-DOAP06340 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.99□□□□□ -2.09
HLA-DOAP06340 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
HLA-DOAP06340 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
HLA-DOAP06340 MIR342-201ENST00000362212 99 ntBASIC1.98□□□□□ -2.09
HLA-DOAP06340 Y_RNA.336-201ENST00000365307 109 ntBASIC1.98□□□□□ -2.09
HLA-DOAP06340 RNU6-1189P-201ENST00000383958 107 ntBASIC1.98□□□□□ -2.09
HLA-DOAP06340 Y_RNA.440-201ENST00000384120 114 ntBASIC1.98□□□□□ -2.09
HLA-DOAP06340 MIR524-201ENST00000385242 87 ntBASIC1.98□□□□□ -2.09
HLA-DOAP06340 MIRLET7F2-201ENST00000385277 83 ntBASIC1.98□□□□□ -2.09
HLA-DOAP06340 RN7SKP200-201ENST00000410564 320 ntBASIC1.98□□□□□ -2.09
HLA-DOAP06340 RNU7-34P-201ENST00000459394 64 ntBASIC1.98□□□□□ -2.09
HLA-DOAP06340 CYCTP-201ENST00000504253 315 ntBASIC1.98□□□□□ -2.09
HLA-DOAP06340 RNU7-12P-201ENST00000516030 62 ntBASIC1.98□□□□□ -2.09
HLA-DOAP06340 RNU6-240P-201ENST00000516098 97 ntBASIC1.98□□□□□ -2.09
HLA-DOAP06340 RNU7-181P-201ENST00000517234 74 ntBASIC1.98□□□□□ -2.09
HLA-DOAP06340 AP003484.1-201ENST00000530974 250 ntBASIC1.98□□□□□ -2.09
HLA-DOAP06340 MIR4778-201ENST00000577635 80 ntBASIC1.98□□□□□ -2.09
HLA-DOAP06340 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
HLA-DOAP06340 MIR548A1-201ENST00000385041 97 ntBASIC1.97□□□□□ -2.09
HLA-DOAP06340 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
HLA-DOAP06340 AL034345.1-201ENST00000407768 123 ntBASIC1.97□□□□□ -2.09
HLA-DOAP06340 AC015922.2-201ENST00000435593 184 ntBASIC1.97□□□□□ -2.09
HLA-DOAP06340 MTATP6P21-201ENST00000440681 189 ntBASIC1.97□□□□□ -2.09
HLA-DOAP06340 SNORA31.4-201ENST00000516049 129 ntBASIC1.97□□□□□ -2.09
HLA-DOAP06340 RNA5SP364-201ENST00000516938 78 ntBASIC1.97□□□□□ -2.09
HLA-DOAP06340 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.97□□□□□ -2.09
HLA-DOAP06340 SNORA28-201ENST00000606769 126 ntBASIC1.97□□□□□ -2.09
HLA-DOAP06340 AC025166.1-201ENST00000612411 163 ntBASIC1.97□□□□□ -2.09
HLA-DOAP06340 MTND5P18-201ENST00000445624 1801 ntBASIC1.96□□□□□ -2.1
HLA-DOAP06340 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HLA-DOAP06340 MIR378A-201ENST00000362177 66 ntBASIC1.96□□□□□ -2.1
HLA-DOAP06340 RNU6-661P-201ENST00000362409 107 ntBASIC1.96□□□□□ -2.1
HLA-DOAP06340 Y_RNA.35-201ENST00000362601 101 ntBASIC1.96□□□□□ -2.1
HLA-DOAP06340 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.96□□□□□ -2.1
HLA-DOAP06340 SNX2P2-201ENST00000424553 323 ntBASIC1.96□□□□□ -2.1
HLA-DOAP06340 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.96□□□□□ -2.1
HLA-DOAP06340 AC108729.3-201ENST00000513484 108 ntBASIC1.96□□□□□ -2.1
HLA-DOAP06340 AL442644.1-201ENST00000454390 3105 ntBASIC1.95□□□□□ -2.1
HLA-DOAP06340 RNU6-834P-201ENST00000362367 110 ntBASIC1.95□□□□□ -2.1
HLA-DOAP06340 Y_RNA.410-201ENST00000383992 113 ntBASIC1.95□□□□□ -2.1
HLA-DOAP06340 HMGN2P32-201ENST00000444648 269 ntBASIC1.95□□□□□ -2.1
HLA-DOAP06340 snoU13.27-201ENST00000459278 104 ntBASIC1.95□□□□□ -2.1
HLA-DOAP06340 SNORA18.7-201ENST00000516910 131 ntBASIC1.95□□□□□ -2.1
HLA-DOAP06340 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 173.6 ms