Protein–RNA interactions for Protein: P04049

RAF1, RAF proto-oncogene serine/threonine-protein kinase, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1P04049 RNU6-275P-201ENST00000364910 107 ntBASIC1.25□□□□□ -2.21
RAF1P04049 RNU6-728P-201ENST00000365375 104 ntBASIC1.25□□□□□ -2.21
RAF1P04049 SNORA2.2-201ENST00000365473 135 ntBASIC1.25□□□□□ -2.21
RAF1P04049 MIR7-2-201ENST00000384970 110 ntBASIC1.25□□□□□ -2.21
RAF1P04049 RNU4-43P-201ENST00000410628 137 ntBASIC1.25□□□□□ -2.21
RAF1P04049 AL121914.1-201ENST00000450188 156 ntBASIC1.25□□□□□ -2.21
RAF1P04049 RNU7-120P-201ENST00000459334 63 ntBASIC1.25□□□□□ -2.21
RAF1P04049 AC090049.2-201ENST00000550377 109 ntBASIC1.25□□□□□ -2.21
RAF1P04049 AC072026.1-201ENST00000605023 201 ntBASIC1.25□□□□□ -2.21
RAF1P04049 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
RAF1P04049 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.24□□□□□ -2.21
RAF1P04049 Y_RNA.66-201ENST00000362862 102 ntBASIC1.24□□□□□ -2.21
RAF1P04049 RNU6-682P-201ENST00000363843 106 ntBASIC1.24□□□□□ -2.21
RAF1P04049 SNORD38C-201ENST00000384381 69 ntBASIC1.24□□□□□ -2.21
RAF1P04049 MIR15B-201ENST00000385045 98 ntBASIC1.24□□□□□ -2.21
RAF1P04049 MIR136-201ENST00000385207 82 ntBASIC1.24□□□□□ -2.21
RAF1P04049 MIR613-201ENST00000385248 95 ntBASIC1.24□□□□□ -2.21
RAF1P04049 MIR758-201ENST00000390227 88 ntBASIC1.24□□□□□ -2.21
RAF1P04049 RNU6-907P-201ENST00000390924 102 ntBASIC1.24□□□□□ -2.21
RAF1P04049 RNU2-70P-201ENST00000410718 179 ntBASIC1.24□□□□□ -2.21
RAF1P04049 RNA5SP153-201ENST00000516498 76 ntBASIC1.24□□□□□ -2.21
RAF1P04049 RNU6-861P-201ENST00000516745 106 ntBASIC1.24□□□□□ -2.21
RAF1P04049 RNU6-922P-201ENST00000516753 99 ntBASIC1.24□□□□□ -2.21
RAF1P04049 RN7SKP88-201ENST00000516847 250 ntBASIC1.24□□□□□ -2.21
RAF1P04049 RNU6-365P-201ENST00000517113 106 ntBASIC1.24□□□□□ -2.21
RAF1P04049 MRPS18CP4-201ENST00000535821 231 ntBASIC1.24□□□□□ -2.21
RAF1P04049 AC097639.2-201ENST00000603159 172 ntBASIC1.24□□□□□ -2.21
RAF1P04049 7SK.8-201ENST00000612110 250 ntBASIC1.24□□□□□ -2.21
RAF1P04049 7SK.11-201ENST00000615477 250 ntBASIC1.24□□□□□ -2.21
RAF1P04049 RMST_2.1-201ENST00000617263 136 ntBASIC1.24□□□□□ -2.21
RAF1P04049 7SK.13-201ENST00000622040 250 ntBASIC1.24□□□□□ -2.21
RAF1P04049 SNORD61-201ENST00000384252 73 ntBASIC1.23□□□□□ -2.21
RAF1P04049 SNORD41-201ENST00000386967 70 ntBASIC1.23□□□□□ -2.21
RAF1P04049 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
RAF1P04049 MIR548O-201ENST00000408583 114 ntBASIC1.23□□□□□ -2.21
RAF1P04049 RNU2-64P-201ENST00000411315 191 ntBASIC1.23□□□□□ -2.21
RAF1P04049 SNRPGP13-201ENST00000442212 177 ntBASIC1.23□□□□□ -2.21
RAF1P04049 RPL30P7-201ENST00000479312 323 ntBASIC1.23□□□□□ -2.21
RAF1P04049 RNU6-830P-201ENST00000516353 107 ntBASIC1.23□□□□□ -2.21
RAF1P04049 RNU7-25P-201ENST00000516544 62 ntBASIC1.23□□□□□ -2.21
RAF1P04049 RNU6-197P-201ENST00000516680 100 ntBASIC1.23□□□□□ -2.21
RAF1P04049 RNU6-126P-201ENST00000516685 103 ntBASIC1.23□□□□□ -2.21
RAF1P04049 AC007751.1-201ENST00000529260 376 ntBASIC1.23□□□□□ -2.21
RAF1P04049 MIR3664-201ENST00000579074 99 ntBASIC1.23□□□□□ -2.21
RAF1P04049 AL513534.2-201ENST00000603836 250 ntBASIC1.23□□□□□ -2.21
RAF1P04049 SNORD114-22-201ENST00000365423 72 ntBASIC1.22□□□□□ -2.21
RAF1P04049 Y_RNA.547-201ENST00000384654 119 ntBASIC1.22□□□□□ -2.21
RAF1P04049 MIR548A2-201ENST00000384956 97 ntBASIC1.22□□□□□ -2.21
RAF1P04049 SNORA26-201ENST00000391286 122 ntBASIC1.22□□□□□ -2.21
RAF1P04049 RNU6-693P-201ENST00000516134 107 ntBASIC1.22□□□□□ -2.21
RAF1P04049 RNU6-182P-201ENST00000516970 105 ntBASIC1.22□□□□□ -2.21
RAF1P04049 AC015726.2-201ENST00000620112 122 ntBASIC1.22□□□□□ -2.21
RAF1P04049 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.21□□□□□ -2.22
RAF1P04049 MIR26B-201ENST00000362251 77 ntBASIC1.21□□□□□ -2.22
RAF1P04049 Y_RNA.23-201ENST00000362496 106 ntBASIC1.21□□□□□ -2.22
RAF1P04049 RNU6-888P-201ENST00000363010 101 ntBASIC1.21□□□□□ -2.22
RAF1P04049 Y_RNA.240-201ENST00000364469 95 ntBASIC1.21□□□□□ -2.22
RAF1P04049 RNU6-312P-201ENST00000364629 107 ntBASIC1.21□□□□□ -2.22
RAF1P04049 RNU6-53P-201ENST00000365367 106 ntBASIC1.21□□□□□ -2.22
RAF1P04049 SNORD24-201ENST00000383884 75 ntBASIC1.21□□□□□ -2.22
RAF1P04049 RNU6-643P-201ENST00000384018 107 ntBASIC1.21□□□□□ -2.22
RAF1P04049 SNORD26-201ENST00000384147 75 ntBASIC1.21□□□□□ -2.22
RAF1P04049 MIR518F-201ENST00000384973 87 ntBASIC1.21□□□□□ -2.22
RAF1P04049 AL451046.2-201ENST00000403074 277 ntBASIC1.21□□□□□ -2.22
RAF1P04049 RNU4-57P-201ENST00000515980 135 ntBASIC1.21□□□□□ -2.22
RAF1P04049 RNU6-504P-201ENST00000516568 104 ntBASIC1.21□□□□□ -2.22
RAF1P04049 RNU6-1270P-201ENST00000517128 108 ntBASIC1.21□□□□□ -2.22
RAF1P04049 MIR3668-201ENST00000582138 75 ntBASIC1.21□□□□□ -2.22
RAF1P04049 MIR8065-201ENST00000620577 100 ntBASIC1.21□□□□□ -2.22
RAF1P04049 SNORA79-201ENST00000408376 140 ntBASIC1.2□□□□□ -2.22
RAF1P04049 SEPT7P4-201ENST00000437076 306 ntBASIC1.2□□□□□ -2.22
RAF1P04049 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.2□□□□□ -2.22
RAF1P04049 AC074198.2-201ENST00000508153 258 ntBASIC1.2□□□□□ -2.22
RAF1P04049 RNU6-322P-201ENST00000516010 103 ntBASIC1.2□□□□□ -2.22
RAF1P04049 SNORA18.7-201ENST00000516910 131 ntBASIC1.2□□□□□ -2.22
RAF1P04049 SNORA74.3-201ENST00000517108 154 ntBASIC1.2□□□□□ -2.22
RAF1P04049 MIR4431-201ENST00000579990 94 ntBASIC1.2□□□□□ -2.22
RAF1P04049 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.2□□□□□ -2.22
RAF1P04049 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
RAF1P04049 SNORA1-201ENST00000384107 130 ntBASIC1.19□□□□□ -2.22
RAF1P04049 U8.17-201ENST00000391292 132 ntBASIC1.19□□□□□ -2.22
RAF1P04049 RNU5E-9P-201ENST00000411164 104 ntBASIC1.19□□□□□ -2.22
RAF1P04049 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.19□□□□□ -2.22
RAF1P04049 SNORD123-201ENST00000459473 70 ntBASIC1.19□□□□□ -2.22
RAF1P04049 Y_RNA.662-201ENST00000516028 97 ntBASIC1.19□□□□□ -2.22
RAF1P04049 RNA5SP480-201ENST00000516840 109 ntBASIC1.19□□□□□ -2.22
RAF1P04049 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.19□□□□□ -2.22
RAF1P04049 AC019288.1-201ENST00000557918 224 ntBASIC1.19□□□□□ -2.22
RAF1P04049 MIR378D2-201ENST00000580636 98 ntBASIC1.19□□□□□ -2.22
RAF1P04049 GHRLOS.1-201ENST00000610995 70 ntBASIC1.19□□□□□ -2.22
RAF1P04049 FTX_2.1-201ENST00000618816 94 ntBASIC1.19□□□□□ -2.22
RAF1P04049 SNORD115-28-201ENST00000363931 81 ntBASIC1.18□□□□□ -2.22
RAF1P04049 RNU6-978P-201ENST00000364371 103 ntBASIC1.18□□□□□ -2.22
RAF1P04049 Y_RNA.540-201ENST00000384638 111 ntBASIC1.18□□□□□ -2.22
RAF1P04049 SNORD28B-201ENST00000390993 75 ntBASIC1.18□□□□□ -2.22
RAF1P04049 RNU6-938P-201ENST00000411285 103 ntBASIC1.18□□□□□ -2.22
RAF1P04049 AC006461.1-201ENST00000412637 326 ntBASIC1.18□□□□□ -2.22
RAF1P04049 RNU7-181P-201ENST00000517234 74 ntBASIC1.18□□□□□ -2.22
RAF1P04049 AC068338.1-201ENST00000565567 176 ntBASIC1.18□□□□□ -2.22
RAF1P04049 MIR548AR-201ENST00000582191 57 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms