Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 RNU6-365P-201ENST00000517113 106 ntBASIC1.11□□□□□ -2.23
VTNP04004 RNU6-1270P-201ENST00000517128 108 ntBASIC1.11□□□□□ -2.23
VTNP04004 MIR4764-201ENST00000580680 88 ntBASIC1.11□□□□□ -2.23
VTNP04004 MIR548AR-201ENST00000582191 57 ntBASIC1.11□□□□□ -2.23
VTNP04004 AL096861.1-201ENST00000610899 123 ntBASIC1.11□□□□□ -2.23
VTNP04004 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
VTNP04004 Y_RNA.432-201ENST00000384087 111 ntBASIC1.1□□□□□ -2.23
VTNP04004 Y_RNA.547-201ENST00000384654 119 ntBASIC1.1□□□□□ -2.23
VTNP04004 SNORD28B-201ENST00000390993 75 ntBASIC1.1□□□□□ -2.23
VTNP04004 RNU6-1228P-201ENST00000391014 107 ntBASIC1.1□□□□□ -2.23
VTNP04004 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.1□□□□□ -2.23
VTNP04004 AL121914.1-201ENST00000450188 156 ntBASIC1.1□□□□□ -2.23
VTNP04004 Y_RNA.797-201ENST00000515977 94 ntBASIC1.1□□□□□ -2.23
VTNP04004 RNU6-388P-201ENST00000517012 105 ntBASIC1.1□□□□□ -2.23
VTNP04004 RNU6-389P-201ENST00000517048 105 ntBASIC1.1□□□□□ -2.23
VTNP04004 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.09□□□□□ -2.23
VTNP04004 Y_RNA.91-201ENST00000363042 107 ntBASIC1.09□□□□□ -2.23
VTNP04004 RNU6-728P-201ENST00000365375 104 ntBASIC1.09□□□□□ -2.23
VTNP04004 Y_RNA.476-201ENST00000384347 108 ntBASIC1.09□□□□□ -2.23
VTNP04004 MIR618-201ENST00000385287 98 ntBASIC1.09□□□□□ -2.23
VTNP04004 RNU7-41P-201ENST00000515917 61 ntBASIC1.09□□□□□ -2.23
VTNP04004 SNORA31.2-201ENST00000516019 134 ntBASIC1.09□□□□□ -2.23
VTNP04004 MIR4744-201ENST00000581563 82 ntBASIC1.09□□□□□ -2.23
VTNP04004 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.09□□□□□ -2.23
VTNP04004 MIR3192-201ENST00000584920 77 ntBASIC1.09□□□□□ -2.23
VTNP04004 AL391903.3-201ENST00000612158 163 ntBASIC1.09□□□□□ -2.23
VTNP04004 RMST_2.1-201ENST00000617263 136 ntBASIC1.09□□□□□ -2.23
VTNP04004 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.09□□□□□ -2.23
VTNP04004 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.09□□□□□ -2.24
VTNP04004 MIR373-201ENST00000362273 69 ntBASIC1.08□□□□□ -2.24
VTNP04004 Y_RNA.7-201ENST00000362352 102 ntBASIC1.08□□□□□ -2.24
VTNP04004 Y_RNA.83-201ENST00000363005 113 ntBASIC1.08□□□□□ -2.24
VTNP04004 SNORA25.3-201ENST00000363205 127 ntBASIC1.08□□□□□ -2.24
VTNP04004 RNU6-379P-201ENST00000363813 104 ntBASIC1.08□□□□□ -2.24
VTNP04004 SNORD45.3-201ENST00000363836 72 ntBASIC1.08□□□□□ -2.24
VTNP04004 Y_RNA.200-201ENST00000364018 102 ntBASIC1.08□□□□□ -2.24
VTNP04004 Y_RNA.634-201ENST00000364811 113 ntBASIC1.08□□□□□ -2.24
VTNP04004 Y_RNA.370-201ENST00000365589 108 ntBASIC1.08□□□□□ -2.24
VTNP04004 RNY3P5-201ENST00000384127 102 ntBASIC1.08□□□□□ -2.24
VTNP04004 SNORD61-201ENST00000384252 73 ntBASIC1.08□□□□□ -2.24
VTNP04004 RNU4-70P-201ENST00000384579 139 ntBASIC1.08□□□□□ -2.24
VTNP04004 SNORD58.1-201ENST00000391313 66 ntBASIC1.08□□□□□ -2.24
VTNP04004 SNORA79-201ENST00000408376 140 ntBASIC1.08□□□□□ -2.24
VTNP04004 RNU6-830P-201ENST00000516353 107 ntBASIC1.08□□□□□ -2.24
VTNP04004 RNU6-504P-201ENST00000516568 104 ntBASIC1.08□□□□□ -2.24
VTNP04004 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
VTNP04004 AC078938.1-201ENST00000620993 318 ntBASIC1.08□□□□□ -2.24
VTNP04004 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
VTNP04004 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.08□□□□□ -2.24
VTNP04004 RNU6-103P-201ENST00000363686 107 ntBASIC1.07□□□□□ -2.24
VTNP04004 Y_RNA.182-201ENST00000363880 111 ntBASIC1.07□□□□□ -2.24
VTNP04004 Y_RNA.241-201ENST00000364470 117 ntBASIC1.07□□□□□ -2.24
VTNP04004 Y_RNA.515-201ENST00000384535 112 ntBASIC1.07□□□□□ -2.24
VTNP04004 RNU6-939P-201ENST00000384634 107 ntBASIC1.07□□□□□ -2.24
VTNP04004 RNU6-1067P-201ENST00000384752 107 ntBASIC1.07□□□□□ -2.24
VTNP04004 MIR489-201ENST00000384923 84 ntBASIC1.07□□□□□ -2.24
VTNP04004 SNORA26-201ENST00000391286 122 ntBASIC1.07□□□□□ -2.24
VTNP04004 RNU2-55P-201ENST00000411146 174 ntBASIC1.07□□□□□ -2.24
VTNP04004 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.07□□□□□ -2.24
VTNP04004 RNU7-43P-201ENST00000516554 64 ntBASIC1.07□□□□□ -2.24
VTNP04004 RNU6-126P-201ENST00000516685 103 ntBASIC1.07□□□□□ -2.24
VTNP04004 MIR3973-201ENST00000579824 107 ntBASIC1.07□□□□□ -2.24
VTNP04004 MIR4308-201ENST00000580634 81 ntBASIC1.07□□□□□ -2.24
VTNP04004 AL022345.2-201ENST00000606307 135 ntBASIC1.07□□□□□ -2.24
VTNP04004 MIR6734-201ENST00000621166 68 ntBASIC1.07□□□□□ -2.24
VTNP04004 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
VTNP04004 SNORD115-28-201ENST00000363931 81 ntBASIC1.06□□□□□ -2.24
VTNP04004 SNORA1.2-201ENST00000365189 134 ntBASIC1.06□□□□□ -2.24
VTNP04004 RNU6-910P-201ENST00000390844 107 ntBASIC1.06□□□□□ -2.24
VTNP04004 snoU13.18-201ENST00000459483 104 ntBASIC1.06□□□□□ -2.24
VTNP04004 AC107297.1-201ENST00000459991 176 ntBASIC1.06□□□□□ -2.24
VTNP04004 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.06□□□□□ -2.24
VTNP04004 RNU4-57P-201ENST00000515980 135 ntBASIC1.06□□□□□ -2.24
VTNP04004 RNA5SP220-201ENST00000516298 104 ntBASIC1.06□□□□□ -2.24
VTNP04004 RNU7-40P-201ENST00000516397 64 ntBASIC1.06□□□□□ -2.24
VTNP04004 SNORA70.22-201ENST00000517160 124 ntBASIC1.06□□□□□ -2.24
VTNP04004 AC130289.1-201ENST00000577321 73 ntBASIC1.06□□□□□ -2.24
VTNP04004 AP000942.4-201ENST00000604811 241 ntBASIC1.06□□□□□ -2.24
VTNP04004 AC027335.2-201ENST00000624030 375 ntBASIC1.06□□□□□ -2.24
VTNP04004 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.06□□□□□ -2.24
VTNP04004 RNU6-484P-201ENST00000384016 107 ntBASIC1.05□□□□□ -2.24
VTNP04004 SNORA25-201ENST00000384384 134 ntBASIC1.05□□□□□ -2.24
VTNP04004 Y_RNA.552-201ENST00000384665 112 ntBASIC1.05□□□□□ -2.24
VTNP04004 Y_RNA.571-201ENST00000384753 98 ntBASIC1.05□□□□□ -2.24
VTNP04004 RNU6-578P-201ENST00000390980 103 ntBASIC1.05□□□□□ -2.24
VTNP04004 MIR548J-201ENST00000408833 112 ntBASIC1.05□□□□□ -2.24
VTNP04004 AC245047.7-201ENST00000440265 293 ntBASIC1.05□□□□□ -2.24
VTNP04004 SNORA31.4-201ENST00000516049 129 ntBASIC1.05□□□□□ -2.24
VTNP04004 AC007751.1-201ENST00000529260 376 ntBASIC1.05□□□□□ -2.24
VTNP04004 AC109810.1-201ENST00000534066 224 ntBASIC1.05□□□□□ -2.24
VTNP04004 AC008133.2-201ENST00000624540 351 ntBASIC1.05□□□□□ -2.24
VTNP04004 MIR4251-201ENST00000635819 61 ntBASIC1.05□□□□□ -2.24
VTNP04004 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.04□□□□□ -2.24
VTNP04004 MIR411-201ENST00000362239 96 ntBASIC1.04□□□□□ -2.24
VTNP04004 RNU6-1020P-201ENST00000363684 107 ntBASIC1.04□□□□□ -2.24
VTNP04004 RNY1-201ENST00000364228 113 ntBASIC1.04□□□□□ -2.24
VTNP04004 RNU6-47P-201ENST00000383866 107 ntBASIC1.04□□□□□ -2.24
VTNP04004 RNU6-42P-201ENST00000384165 107 ntBASIC1.04□□□□□ -2.24
VTNP04004 SNORA51.10-201ENST00000384418 136 ntBASIC1.04□□□□□ -2.24
VTNP04004 MIR518F-201ENST00000384973 87 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms