Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 Y_RNA.432-201ENST00000384087 111 ntBASIC0.94□□□□□ -2.26
MT-ND1P03886 RNU6-482P-201ENST00000391068 107 ntBASIC0.94□□□□□ -2.26
MT-ND1P03886 MIR1185-1-201ENST00000408598 86 ntBASIC0.94□□□□□ -2.26
MT-ND1P03886 RNU6-365P-201ENST00000517113 106 ntBASIC0.94□□□□□ -2.26
MT-ND1P03886 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
MT-ND1P03886 MIR4661-201ENST00000582720 75 ntBASIC0.94□□□□□ -2.26
MT-ND1P03886 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.94□□□□□ -2.26
MT-ND1P03886 MIR4295-201ENST00000585286 85 ntBASIC0.94□□□□□ -2.26
MT-ND1P03886 AC097639.2-201ENST00000603159 172 ntBASIC0.94□□□□□ -2.26
MT-ND1P03886 AP000942.3-201ENST00000603702 160 ntBASIC0.94□□□□□ -2.26
MT-ND1P03886 AC008133.2-201ENST00000624540 351 ntBASIC0.94□□□□□ -2.26
MT-ND1P03886 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
MT-ND1P03886 Y_RNA.23-201ENST00000362496 106 ntBASIC0.93□□□□□ -2.26
MT-ND1P03886 RNU6-888P-201ENST00000363010 101 ntBASIC0.93□□□□□ -2.26
MT-ND1P03886 Y_RNA.370-201ENST00000365589 108 ntBASIC0.93□□□□□ -2.26
MT-ND1P03886 RNU6-47P-201ENST00000383866 107 ntBASIC0.93□□□□□ -2.26
MT-ND1P03886 SNORA75.2-201ENST00000391138 150 ntBASIC0.93□□□□□ -2.26
MT-ND1P03886 RNU6-918P-201ENST00000391219 106 ntBASIC0.93□□□□□ -2.26
MT-ND1P03886 SNORA75.3-201ENST00000391231 150 ntBASIC0.93□□□□□ -2.26
MT-ND1P03886 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.93□□□□□ -2.26
MT-ND1P03886 AC087343.1-201ENST00000477341 475 ntBASIC0.93□□□□□ -2.26
MT-ND1P03886 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.93□□□□□ -2.26
MT-ND1P03886 SNORD79.1-201ENST00000516069 84 ntBASIC0.93□□□□□ -2.26
MT-ND1P03886 RNA5SP153-201ENST00000516498 76 ntBASIC0.93□□□□□ -2.26
MT-ND1P03886 RNU6-1271P-201ENST00000517049 105 ntBASIC0.93□□□□□ -2.26
MT-ND1P03886 AC130289.1-201ENST00000577321 73 ntBASIC0.93□□□□□ -2.26
MT-ND1P03886 MIR4744-201ENST00000581563 82 ntBASIC0.93□□□□□ -2.26
MT-ND1P03886 MIR4524B-201ENST00000581569 115 ntBASIC0.93□□□□□ -2.26
MT-ND1P03886 MIR4791-201ENST00000607666 84 ntBASIC0.93□□□□□ -2.26
MT-ND1P03886 AC108706.1-201ENST00000611053 297 ntBASIC0.93□□□□□ -2.26
MT-ND1P03886 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
MT-ND1P03886 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.93□□□□□ -2.26
MT-ND1P03886 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.93□□□□□ -2.26
MT-ND1P03886 Y_RNA.7-201ENST00000362352 102 ntBASIC0.92□□□□□ -2.26
MT-ND1P03886 Y_RNA.37-201ENST00000362606 108 ntBASIC0.92□□□□□ -2.26
MT-ND1P03886 RNA5SP264-201ENST00000363115 107 ntBASIC0.92□□□□□ -2.26
MT-ND1P03886 Y_RNA.140-201ENST00000363474 103 ntBASIC0.92□□□□□ -2.26
MT-ND1P03886 SNORD115-28-201ENST00000363931 81 ntBASIC0.92□□□□□ -2.26
MT-ND1P03886 Y_RNA.188-201ENST00000363952 111 ntBASIC0.92□□□□□ -2.26
MT-ND1P03886 Y_RNA.238-201ENST00000364441 102 ntBASIC0.92□□□□□ -2.26
MT-ND1P03886 SNORA1-201ENST00000384107 130 ntBASIC0.92□□□□□ -2.26
MT-ND1P03886 RNU6-578P-201ENST00000390980 103 ntBASIC0.92□□□□□ -2.26
MT-ND1P03886 RNU2-70P-201ENST00000410718 179 ntBASIC0.92□□□□□ -2.26
MT-ND1P03886 AC063976.4-201ENST00000421971 163 ntBASIC0.92□□□□□ -2.26
MT-ND1P03886 AF228730.3-201ENST00000436691 102 ntBASIC0.92□□□□□ -2.26
MT-ND1P03886 RNU6-504P-201ENST00000516568 104 ntBASIC0.92□□□□□ -2.26
MT-ND1P03886 SNORD36C-201ENST00000516733 66 ntBASIC0.92□□□□□ -2.26
MT-ND1P03886 AC109810.1-201ENST00000534066 224 ntBASIC0.92□□□□□ -2.26
MT-ND1P03886 AC009779.6-201ENST00000603972 165 ntBASIC0.92□□□□□ -2.26
MT-ND1P03886 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.92□□□□□ -2.26
MT-ND1P03886 AC078938.1-201ENST00000620993 318 ntBASIC0.92□□□□□ -2.26
MT-ND1P03886 MIR4251-201ENST00000635819 61 ntBASIC0.92□□□□□ -2.26
MT-ND1P03886 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.92□□□□□ -2.26
MT-ND1P03886 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
MT-ND1P03886 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
MT-ND1P03886 MIR411-201ENST00000362239 96 ntBASIC0.91□□□□□ -2.26
MT-ND1P03886 RNU6-103P-201ENST00000363686 107 ntBASIC0.91□□□□□ -2.26
MT-ND1P03886 Y_RNA.200-201ENST00000364018 102 ntBASIC0.91□□□□□ -2.26
MT-ND1P03886 Y_RNA.274-201ENST00000364714 101 ntBASIC0.91□□□□□ -2.26
MT-ND1P03886 Y_RNA.571-201ENST00000384753 98 ntBASIC0.91□□□□□ -2.26
MT-ND1P03886 AL392103.1-201ENST00000447000 198 ntBASIC0.91□□□□□ -2.26
MT-ND1P03886 SNORA18.4-201ENST00000516440 124 ntBASIC0.91□□□□□ -2.26
MT-ND1P03886 RNU6-197P-201ENST00000516680 100 ntBASIC0.91□□□□□ -2.26
MT-ND1P03886 MIR548AO-201ENST00000579992 96 ntBASIC0.91□□□□□ -2.26
MT-ND1P03886 MTND1P7-201ENST00000632801 297 ntBASIC0.91□□□□□ -2.26
MT-ND1P03886 MIR376A2-201ENST00000636782 80 ntBASIC0.91□□□□□ -2.26
MT-ND1P03886 RNU4-38P-201ENST00000364472 129 ntBASIC0.9□□□□□ -2.27
MT-ND1P03886 RNU6-728P-201ENST00000365375 104 ntBASIC0.9□□□□□ -2.27
MT-ND1P03886 Y_RNA.401-201ENST00000383965 117 ntBASIC0.9□□□□□ -2.27
MT-ND1P03886 Y_RNA.489-201ENST00000384410 101 ntBASIC0.9□□□□□ -2.27
MT-ND1P03886 Y_RNA.537-201ENST00000384626 109 ntBASIC0.9□□□□□ -2.27
MT-ND1P03886 MT-TG-201ENST00000387429 68 ntBASIC0.9□□□□□ -2.27
MT-ND1P03886 RNU4-43P-201ENST00000410628 137 ntBASIC0.9□□□□□ -2.27
MT-ND1P03886 POLR2J4-204ENST00000418424 324 ntBASIC0.9□□□□□ -2.27
MT-ND1P03886 AC002429.1-201ENST00000437672 148 ntBASIC0.9□□□□□ -2.27
MT-ND1P03886 AL121914.1-201ENST00000450188 156 ntBASIC0.9□□□□□ -2.27
MT-ND1P03886 RNU7-21P-201ENST00000459430 62 ntBASIC0.9□□□□□ -2.27
MT-ND1P03886 RNU6-388P-201ENST00000517012 105 ntBASIC0.9□□□□□ -2.27
MT-ND1P03886 RNU6-389P-201ENST00000517048 105 ntBASIC0.9□□□□□ -2.27
MT-ND1P03886 AC022559.1-201ENST00000520905 205 ntBASIC0.9□□□□□ -2.27
MT-ND1P03886 MIR103A2-201ENST00000362154 78 ntBASIC0.89□□□□□ -2.27
MT-ND1P03886 Y_RNA.83-201ENST00000363005 113 ntBASIC0.89□□□□□ -2.27
MT-ND1P03886 Y_RNA.182-201ENST00000363880 111 ntBASIC0.89□□□□□ -2.27
MT-ND1P03886 Y_RNA.241-201ENST00000364470 117 ntBASIC0.89□□□□□ -2.27
MT-ND1P03886 SNORD114-24-201ENST00000365029 72 ntBASIC0.89□□□□□ -2.27
MT-ND1P03886 SNORA1.2-201ENST00000365189 134 ntBASIC0.89□□□□□ -2.27
MT-ND1P03886 SNORA80D-201ENST00000384488 135 ntBASIC0.89□□□□□ -2.27
MT-ND1P03886 SNORD77.3-201ENST00000391113 65 ntBASIC0.89□□□□□ -2.27
MT-ND1P03886 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.89□□□□□ -2.27
MT-ND1P03886 Y_RNA.618-201ENST00000410949 107 ntBASIC0.89□□□□□ -2.27
MT-ND1P03886 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.89□□□□□ -2.27
MT-ND1P03886 RNU6-126P-201ENST00000516685 103 ntBASIC0.89□□□□□ -2.27
MT-ND1P03886 AP003484.1-201ENST00000530974 250 ntBASIC0.89□□□□□ -2.27
MT-ND1P03886 AC243994.1-201ENST00000618627 109 ntBASIC0.89□□□□□ -2.27
MT-ND1P03886 U6.106-201ENST00000636360 105 ntBASIC0.89□□□□□ -2.27
MT-ND1P03886 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.88□□□□□ -2.27
MT-ND1P03886 AC008163.1-202ENST00000636004 2889 ntBASIC0.88□□□□□ -2.27
MT-ND1P03886 SNORD115-34-201ENST00000362441 82 ntBASIC0.88□□□□□ -2.27
MT-ND1P03886 SNORD115-12-201ENST00000362583 82 ntBASIC0.88□□□□□ -2.27
MT-ND1P03886 SNORD115-29-201ENST00000362834 82 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 252.8 ms