Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 MTND3P1-201ENST00000441336 220 ntBASIC-1.2□□□□□ -2.6
TNFP01375 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC-1.2□□□□□ -2.6
TNFP01375 SNORD18.2-201ENST00000459604 70 ntBASIC-1.2□□□□□ -2.6
TNFP01375 RNU6-732P-201ENST00000516033 103 ntBASIC-1.2□□□□□ -2.6
TNFP01375 MTND5P40-201ENST00000559945 246 ntBASIC-1.2□□□□□ -2.6
TNFP01375 MIR548AY-201ENST00000617669 107 ntBASIC-1.2□□□□□ -2.6
TNFP01375 SEPT14P19-203ENST00000633205 211 ntBASIC-1.2□□□□□ -2.6
TNFP01375 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.21□□□□□ -2.6
TNFP01375 SNORD115-29-201ENST00000362834 82 ntBASIC-1.21□□□□□ -2.6
TNFP01375 SNORD115-11-201ENST00000363616 82 ntBASIC-1.21□□□□□ -2.6
TNFP01375 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.21□□□□□ -2.6
TNFP01375 SNORD115-22-201ENST00000364456 82 ntBASIC-1.21□□□□□ -2.6
TNFP01375 Y_RNA.243-201ENST00000364481 109 ntBASIC-1.21□□□□□ -2.6
TNFP01375 RNU6-660P-201ENST00000364566 109 ntBASIC-1.21□□□□□ -2.6
TNFP01375 RNY1P2-201ENST00000364820 117 ntBASIC-1.21□□□□□ -2.6
TNFP01375 Y_RNA.328-201ENST00000365208 113 ntBASIC-1.21□□□□□ -2.6
TNFP01375 SNORD115-43-201ENST00000365503 82 ntBASIC-1.21□□□□□ -2.6
TNFP01375 Y_RNA.366-201ENST00000365540 102 ntBASIC-1.21□□□□□ -2.6
TNFP01375 SNORD115-36-201ENST00000365629 82 ntBASIC-1.21□□□□□ -2.6
TNFP01375 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.21□□□□□ -2.6
TNFP01375 Y_RNA.453-201ENST00000384223 109 ntBASIC-1.21□□□□□ -2.6
TNFP01375 RNU6-880P-201ENST00000384526 107 ntBASIC-1.21□□□□□ -2.6
TNFP01375 MIR496-201ENST00000385226 102 ntBASIC-1.21□□□□□ -2.6
TNFP01375 SNORD72-201ENST00000390994 80 ntBASIC-1.21□□□□□ -2.6
TNFP01375 MIR548K-201ENST00000408406 116 ntBASIC-1.21□□□□□ -2.6
TNFP01375 SNORD75.2-201ENST00000408784 58 ntBASIC-1.21□□□□□ -2.6
TNFP01375 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.21□□□□□ -2.6
TNFP01375 TRAJ51-201ENST00000504127 63 ntBASIC-1.21□□□□□ -2.6
TNFP01375 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC-1.21□□□□□ -2.6
TNFP01375 Y_RNA.672-201ENST00000516289 104 ntBASIC-1.21□□□□□ -2.6
TNFP01375 Y_RNA.683-201ENST00000516508 93 ntBASIC-1.21□□□□□ -2.6
TNFP01375 RNU6-410P-201ENST00000517006 107 ntBASIC-1.21□□□□□ -2.6
TNFP01375 SNORA40.17-201ENST00000517256 115 ntBASIC-1.21□□□□□ -2.6
TNFP01375 AC022616.4-201ENST00000522985 181 ntBASIC-1.21□□□□□ -2.6
TNFP01375 AC005972.2-201ENST00000604690 348 ntBASIC-1.21□□□□□ -2.6
TNFP01375 AC022441.3-201ENST00000605737 136 ntBASIC-1.21□□□□□ -2.6
TNFP01375 AL121757.2-201ENST00000611223 313 ntBASIC-1.21□□□□□ -2.6
TNFP01375 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.21□□□□□ -2.6
TNFP01375 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.21□□□□□ -2.6
TNFP01375 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC-1.21□□□□□ -2.6
TNFP01375 MIR410-201ENST00000362222 80 ntBASIC-1.22□□□□□ -2.6
TNFP01375 MIR20A-201ENST00000362279 71 ntBASIC-1.22□□□□□ -2.6
TNFP01375 Y_RNA.145-201ENST00000363527 102 ntBASIC-1.22□□□□□ -2.6
TNFP01375 RNY1P12-201ENST00000364251 105 ntBASIC-1.22□□□□□ -2.6
TNFP01375 RNU6-1329P-201ENST00000365664 107 ntBASIC-1.22□□□□□ -2.6
TNFP01375 RNU6-606P-201ENST00000384721 111 ntBASIC-1.22□□□□□ -2.6
TNFP01375 MIR521-1-201ENST00000384902 87 ntBASIC-1.22□□□□□ -2.6
TNFP01375 MIR548O-201ENST00000408583 114 ntBASIC-1.22□□□□□ -2.6
TNFP01375 MIR548H1-201ENST00000408610 102 ntBASIC-1.22□□□□□ -2.6
TNFP01375 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.22□□□□□ -2.6
TNFP01375 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-1.22□□□□□ -2.6
TNFP01375 Y_RNA.644-201ENST00000459006 113 ntBASIC-1.22□□□□□ -2.6
TNFP01375 AP001542.1-201ENST00000591314 200 ntBASIC-1.22□□□□□ -2.6
TNFP01375 AC073648.5-201ENST00000603502 305 ntBASIC-1.22□□□□□ -2.6
TNFP01375 CLPTM1LP1-201ENST00000604519 484 ntBASIC-1.22□□□□□ -2.6
TNFP01375 Y_RNA.91-201ENST00000363042 107 ntBASIC-1.23□□□□□ -2.61
TNFP01375 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.23□□□□□ -2.61
TNFP01375 RNY1P13-201ENST00000365030 105 ntBASIC-1.23□□□□□ -2.61
TNFP01375 RNU4-17P-201ENST00000365598 141 ntBASIC-1.23□□□□□ -2.61
TNFP01375 RNU6-449P-201ENST00000383914 107 ntBASIC-1.23□□□□□ -2.61
TNFP01375 RNU6-949P-201ENST00000384040 107 ntBASIC-1.23□□□□□ -2.61
TNFP01375 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.23□□□□□ -2.61
TNFP01375 MIR548E-201ENST00000408287 88 ntBASIC-1.23□□□□□ -2.61
TNFP01375 MTATP6P20-201ENST00000414147 562 ntBASIC-1.23□□□□□ -2.61
TNFP01375 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-1.23□□□□□ -2.61
TNFP01375 DLGAP5P1-201ENST00000430307 464 ntBASIC-1.23□□□□□ -2.61
TNFP01375 AC244090.1-201ENST00000441884 93 ntBASIC-1.23□□□□□ -2.61
TNFP01375 UBE2D3P4-201ENST00000441973 436 ntBASIC-1.23□□□□□ -2.61
TNFP01375 MTND1P27-201ENST00000451117 902 ntBASIC-1.23□□□□□ -2.61
TNFP01375 RNU7-67P-201ENST00000459003 62 ntBASIC-1.23□□□□□ -2.61
TNFP01375 RNU7-45P-201ENST00000459460 63 ntBASIC-1.23□□□□□ -2.61
TNFP01375 RNU6-1012P-201ENST00000516606 109 ntBASIC-1.23□□□□□ -2.61
TNFP01375 Y_RNA.711-201ENST00000516993 102 ntBASIC-1.23□□□□□ -2.61
TNFP01375 Y_RNA.714-201ENST00000517065 90 ntBASIC-1.23□□□□□ -2.61
TNFP01375 AP002795.1-201ENST00000534879 84 ntBASIC-1.23□□□□□ -2.61
TNFP01375 AC007012.1-201ENST00000567192 175 ntBASIC-1.23□□□□□ -2.61
TNFP01375 AL158063.1-201ENST00000615349 536 ntBASIC-1.23□□□□□ -2.61
TNFP01375 MIR6888-201ENST00000621977 67 ntBASIC-1.23□□□□□ -2.61
TNFP01375 RNU5F-3P-201ENST00000363767 117 ntBASIC-1.24□□□□□ -2.61
TNFP01375 RNU4-75P-201ENST00000364621 146 ntBASIC-1.24□□□□□ -2.61
TNFP01375 Y_RNA.288-201ENST00000364854 92 ntBASIC-1.24□□□□□ -2.61
TNFP01375 Y_RNA.407-201ENST00000383986 113 ntBASIC-1.24□□□□□ -2.61
TNFP01375 Y_RNA.562-201ENST00000384695 113 ntBASIC-1.24□□□□□ -2.61
TNFP01375 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.24□□□□□ -2.61
TNFP01375 MIR1-2-201ENST00000384961 85 ntBASIC-1.24□□□□□ -2.61
TNFP01375 CEP57L1P1-201ENST00000430943 1201 ntBASIC-1.24□□□□□ -2.61
TNFP01375 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-1.24□□□□□ -2.61
TNFP01375 U8.19-201ENST00000459095 133 ntBASIC-1.24□□□□□ -2.61
TNFP01375 RNU6-966P-201ENST00000516479 104 ntBASIC-1.24□□□□□ -2.61
TNFP01375 RNU6-118P-201ENST00000516552 102 ntBASIC-1.24□□□□□ -2.61
TNFP01375 AC109347.2-201ENST00000610220 349 ntBASIC-1.24□□□□□ -2.61
TNFP01375 AC087683.2-201ENST00000611384 326 ntBASIC-1.24□□□□□ -2.61
TNFP01375 U2.17-201ENST00000611454 95 ntBASIC-1.24□□□□□ -2.61
TNFP01375 uc_338.11-201ENST00000619132 160 ntBASIC-1.24□□□□□ -2.61
TNFP01375 AC009878.1-201ENST00000621819 340 ntBASIC-1.24□□□□□ -2.61
TNFP01375 AL669831.3-213ENST00000636676 183 ntBASIC-1.24□□□□□ -2.61
TNFP01375 MIR198-201ENST00000637333 62 ntBASIC-1.24□□□□□ -2.61
TNFP01375 Y_RNA.48-201ENST00000362710 103 ntBASIC-1.25□□□□□ -2.61
TNFP01375 RNU6-931P-201ENST00000363850 107 ntBASIC-1.25□□□□□ -2.61
TNFP01375 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.25□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 168.3 ms