| ATE1 | O95260 | AC106754.2-201 | ENST00000623006 | 233 nt | BASIC | 2.34 | □□□□□ -2.03 | | |
| ATE1 | O95260 | ATP11C-201 | ENST00000327569 | 6115 nt | APPRIS P3 TSL 1 (best) BASIC | 2.33 | □□□□□ -2.04 | | |
| ATE1 | O95260 | RNU4-16P-201 | ENST00000364737 | 141 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| ATE1 | O95260 | SNORA22-201 | ENST00000383907 | 134 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| ATE1 | O95260 | MIR526A1-201 | ENST00000384897 | 85 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| ATE1 | O95260 | RNU7-164P-201 | ENST00000459221 | 62 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| ATE1 | O95260 | SNORD123-201 | ENST00000459473 | 70 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| ATE1 | O95260 | COX6CP6-201 | ENST00000490840 | 228 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| ATE1 | O95260 | RNU6-958P-201 | ENST00000516995 | 106 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| ATE1 | O95260 | SUMO2P16-201 | ENST00000519475 | 264 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| ATE1 | O95260 | MIR4524B-201 | ENST00000581569 | 115 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| ATE1 | O95260 | MIR203B-201 | ENST00000636080 | 86 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| ATE1 | O95260 | DENND4A-202 | ENST00000443035 | 8665 nt | TSL 1 (best) BASIC | 2.33 | □□□□□ -2.04 | | |
| ATE1 | O95260 | LIFR-201 | ENST00000263409 | 10089 nt | APPRIS P1 TSL 1 (best) BASIC | 2.32 | □□□□□ -2.04 | | |
| ATE1 | O95260 | Y_RNA.213-201 | ENST00000364178 | 111 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| ATE1 | O95260 | RNU6-203P-201 | ENST00000384038 | 104 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| ATE1 | O95260 | RNU6-880P-201 | ENST00000384526 | 107 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| ATE1 | O95260 | RNY4P18-201 | ENST00000391107 | 89 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| ATE1 | O95260 | RN7SKP192-201 | ENST00000411291 | 327 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| ATE1 | O95260 | RNY4P20-201 | ENST00000516678 | 93 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| ATE1 | O95260 | RNU7-53P-201 | ENST00000516705 | 60 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| ATE1 | O95260 | MIR4305-201 | ENST00000583252 | 102 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| ATE1 | O95260 | MIR4769-201 | ENST00000584126 | 77 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| ATE1 | O95260 | ZNF658B-202 | ENST00000615961 | 3375 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| ATE1 | O95260 | AC008555.8-201 | ENST00000623602 | 2168 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| ATE1 | O95260 | ZNF260-205 | ENST00000593142 | 4047 nt | APPRIS P1 TSL 1 (best) BASIC | 2.31 | □□□□□ -2.04 | | |
| ATE1 | O95260 | OSTN-201 | ENST00000339051 | 402 nt | APPRIS P1 TSL 1 (best) BASIC | 2.31 | □□□□□ -2.04 | | |
| ATE1 | O95260 | Y_RNA.35-201 | ENST00000362601 | 101 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| ATE1 | O95260 | MIR570-201 | ENST00000384917 | 97 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| ATE1 | O95260 | SNORA3.2-201 | ENST00000408221 | 125 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| ATE1 | O95260 | RNA5SP282-201 | ENST00000516355 | 108 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| ATE1 | O95260 | MIR548AR-201 | ENST00000582191 | 57 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| ATE1 | O95260 | HSPE1P19-201 | ENST00000603327 | 295 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| ATE1 | O95260 | WARS-244 | ENST00000627608 | 123 nt | TSL 5 BASIC | 2.31 | □□□□□ -2.04 | | |
| ATE1 | O95260 | KPNA5-202 | ENST00000368564 | 11311 nt | APPRIS P1 TSL 1 (best) BASIC | 2.31 | □□□□□ -2.04 | | |
| ATE1 | O95260 | TAB3-205 | ENST00000378933 | 6671 nt | APPRIS P1 TSL 1 (best) BASIC | 2.31 | □□□□□ -2.04 | | |
| ATE1 | O95260 | FSIP2-206 | ENST00000611759 | 3882 nt | APPRIS ALT2 TSL 5 BASIC | 2.3 | □□□□□ -2.04 | | |
| ATE1 | O95260 | SNORA63.4-201 | ENST00000362763 | 126 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| ATE1 | O95260 | Y_RNA.298-201 | ENST00000364960 | 107 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| ATE1 | O95260 | AC004965.1-201 | ENST00000413033 | 213 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| ATE1 | O95260 | RPL23AP6-201 | ENST00000446637 | 472 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| ATE1 | O95260 | RPS29P29-201 | ENST00000456396 | 171 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| ATE1 | O95260 | PDCD5P2-201 | ENST00000507570 | 312 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| ATE1 | O95260 | RNU6-589P-201 | ENST00000516485 | 107 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| ATE1 | O95260 | AC130466.1-201 | ENST00000636354 | 4683 nt | TSL 5 BASIC | 2.3 | □□□□□ -2.04 | | |
| ATE1 | O95260 | AL442644.1-201 | ENST00000454390 | 3105 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| ATE1 | O95260 | EYS-211 | ENST00000503581 | 10589 nt | APPRIS P3 TSL 5 BASIC | 2.29 | □□□□□ -2.04 | | |
| ATE1 | O95260 | Y_RNA.198-201 | ENST00000364013 | 98 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| ATE1 | O95260 | RNA5SP259-201 | ENST00000365541 | 109 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| ATE1 | O95260 | snoU13.15-201 | ENST00000459407 | 104 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| ATE1 | O95260 | RNU6-322P-201 | ENST00000516010 | 103 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| ATE1 | O95260 | RNU6-412P-201 | ENST00000516434 | 106 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| ATE1 | O95260 | MIR3152-201 | ENST00000579801 | 74 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| ATE1 | O95260 | MIR3683-201 | ENST00000580847 | 82 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| ATE1 | O95260 | ZNFX1-AS1_2.1-201 | ENST00000610973 | 93 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| ATE1 | O95260 | AL773524.1-201 | ENST00000614065 | 229 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| ATE1 | O95260 | AC243994.1-201 | ENST00000618627 | 109 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| ATE1 | O95260 | ZDBF2-202 | ENST00000611847 | 9890 nt | TSL 5 BASIC | 2.29 | □□□□□ -2.04 | | |
| ATE1 | O95260 | MIR21-201 | ENST00000362134 | 72 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| ATE1 | O95260 | SNORD28B-201 | ENST00000390993 | 75 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| ATE1 | O95260 | SNORA74.3-201 | ENST00000517108 | 154 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| ATE1 | O95260 | IGHVIII-5-1-201 | ENST00000523059 | 99 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| ATE1 | O95260 | AC007012.1-201 | ENST00000567192 | 175 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| ATE1 | O95260 | AC021613.1-201 | ENST00000623880 | 111 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| ATE1 | O95260 | XPO4-202 | ENST00000400602 | 9884 nt | APPRIS ALT1 TSL 5 BASIC | 2.28 | □□□□□ -2.04 | | |
| ATE1 | O95260 | SENP7-206 | ENST00000394094 | 4703 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.27 | □□□□□ -2.05 | | |
| ATE1 | O95260 | MIR144-201 | ENST00000384886 | 86 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| ATE1 | O95260 | RNA5SP261-201 | ENST00000410536 | 106 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| ATE1 | O95260 | AL022718.1-201 | ENST00000412004 | 84 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| ATE1 | O95260 | AC244636.1-201 | ENST00000421152 | 228 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| ATE1 | O95260 | JTBP1-201 | ENST00000441314 | 247 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| ATE1 | O95260 | AC121758.2-201 | ENST00000553271 | 193 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| ATE1 | O95260 | MIR6895-201 | ENST00000613497 | 78 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| ATE1 | O95260 | LMBR1-222 | ENST00000638959 | 93 nt | TSL 5 BASIC | 2.27 | □□□□□ -2.05 | | |
| ATE1 | O95260 | AGL-204 | ENST00000370161 | 6923 nt | TSL 5 BASIC | 2.27 | □□□□□ -2.05 | | |
| ATE1 | O95260 | RNY4P6-201 | ENST00000363667 | 96 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| ATE1 | O95260 | SNORA16B-201 | ENST00000364674 | 135 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| ATE1 | O95260 | RNU6-893P-201 | ENST00000458841 | 100 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| ATE1 | O95260 | RNU7-123P-201 | ENST00000515911 | 60 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| ATE1 | O95260 | ASPM-202 | ENST00000367408 | 3747 nt | TSL 1 (best) BASIC | 2.25 | □□□□□ -2.05 | | |
| ATE1 | O95260 | KIF20B-202 | ENST00000371728 | 6419 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.25 | □□□□□ -2.05 | | |
| ATE1 | O95260 | SNORA6-201 | ENST00000384033 | 151 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| ATE1 | O95260 | SNORA51.10-201 | ENST00000384418 | 136 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| ATE1 | O95260 | MIR513A1-201 | ENST00000385138 | 129 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| ATE1 | O95260 | AC063976.4-201 | ENST00000421971 | 163 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| ATE1 | O95260 | AC079804.2-201 | ENST00000490376 | 200 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| ATE1 | O95260 | LINC02514-201 | ENST00000509058 | 498 nt | TSL 3 BASIC | 2.25 | □□□□□ -2.05 | | |
| ATE1 | O95260 | RNU7-43P-201 | ENST00000516554 | 64 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| ATE1 | O95260 | MIR4791-201 | ENST00000607666 | 84 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| ATE1 | O95260 | NEDD4-205 | ENST00000506154 | 6751 nt | TSL 1 (best) BASIC | 2.25 | □□□□□ -2.05 | | |
| ATE1 | O95260 | RNA5SP289-201 | ENST00000362332 | 137 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| ATE1 | O95260 | RNU6-153P-201 | ENST00000364422 | 104 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| ATE1 | O95260 | RNU6-439P-201 | ENST00000384188 | 106 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| ATE1 | O95260 | Y_RNA.537-201 | ENST00000384626 | 109 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| ATE1 | O95260 | MIR520C-201 | ENST00000385005 | 87 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| ATE1 | O95260 | TRAJ23-201 | ENST00000390514 | 63 nt | APPRIS P1 BASIC | 2.24 | □□□□□ -2.05 | | |
| ATE1 | O95260 | AL451046.2-201 | ENST00000403074 | 277 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| ATE1 | O95260 | AL023284.1-201 | ENST00000403956 | 276 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| ATE1 | O95260 | RNU6ATAC37P-201 | ENST00000408328 | 131 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| ATE1 | O95260 | RNU4-53P-201 | ENST00000410828 | 140 nt | BASIC | 2.24 | □□□□□ -2.05 | | |