Protein–RNA interactions for Protein: O60749

SNX2, Sorting nexin-2, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2O60749 RNU6-1082P-201ENST00000364574 107 ntBASIC1.63□□□□□ -2.15
SNX2O60749 Y_RNA.393-201ENST00000383936 102 ntBASIC1.63□□□□□ -2.15
SNX2O60749 Y_RNA.464-201ENST00000384282 110 ntBASIC1.63□□□□□ -2.15
SNX2O60749 Y_RNA.494-201ENST00000384432 111 ntBASIC1.63□□□□□ -2.15
SNX2O60749 SNORD28B-201ENST00000390993 75 ntBASIC1.63□□□□□ -2.15
SNX2O60749 SNORD77.3-201ENST00000391113 65 ntBASIC1.63□□□□□ -2.15
SNX2O60749 U8.17-201ENST00000391292 132 ntBASIC1.63□□□□□ -2.15
SNX2O60749 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.63□□□□□ -2.15
SNX2O60749 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.63□□□□□ -2.15
SNX2O60749 SNORD123-201ENST00000459473 70 ntBASIC1.63□□□□□ -2.15
SNX2O60749 SNORD36C-201ENST00000516733 66 ntBASIC1.63□□□□□ -2.15
SNX2O60749 MIR548AR-201ENST00000582191 57 ntBASIC1.63□□□□□ -2.15
SNX2O60749 RNY1P11-201ENST00000363759 113 ntBASIC1.62□□□□□ -2.15
SNX2O60749 RNU6-597P-201ENST00000365620 102 ntBASIC1.62□□□□□ -2.15
SNX2O60749 SNORD116-18-201ENST00000383961 92 ntBASIC1.62□□□□□ -2.15
SNX2O60749 SNORD26-201ENST00000384147 75 ntBASIC1.62□□□□□ -2.15
SNX2O60749 Y_RNA.580-201ENST00000391004 95 ntBASIC1.62□□□□□ -2.15
SNX2O60749 RNA5SP458-201ENST00000516188 119 ntBASIC1.62□□□□□ -2.15
SNX2O60749 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
SNX2O60749 Y_RNA.170-201ENST00000363746 110 ntBASIC1.61□□□□□ -2.15
SNX2O60749 RNU6-449P-201ENST00000383914 107 ntBASIC1.61□□□□□ -2.15
SNX2O60749 SNORA74.3-201ENST00000517108 154 ntBASIC1.61□□□□□ -2.15
SNX2O60749 DNAJC19P2-201ENST00000593340 302 ntBASIC1.61□□□□□ -2.15
SNX2O60749 AL365205.2-201ENST00000594586 68 ntBASIC1.61□□□□□ -2.15
SNX2O60749 AL513534.2-201ENST00000603836 250 ntBASIC1.61□□□□□ -2.15
SNX2O60749 AC134878.1-201ENST00000619901 243 ntBASIC1.61□□□□□ -2.15
SNX2O60749 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.61□□□□□ -2.15
SNX2O60749 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
SNX2O60749 MIR570-201ENST00000384917 97 ntBASIC1.6□□□□□ -2.15
SNX2O60749 SNORA17.3-201ENST00000391159 129 ntBASIC1.6□□□□□ -2.15
SNX2O60749 AL451046.2-201ENST00000403074 277 ntBASIC1.6□□□□□ -2.15
SNX2O60749 RNU6-588P-201ENST00000410281 105 ntBASIC1.6□□□□□ -2.15
SNX2O60749 AC108667.1-201ENST00000428618 249 ntBASIC1.6□□□□□ -2.15
SNX2O60749 RNU6-322P-201ENST00000516010 103 ntBASIC1.6□□□□□ -2.15
SNX2O60749 RNU6-1212P-201ENST00000517023 104 ntBASIC1.6□□□□□ -2.15
SNX2O60749 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.6□□□□□ -2.15
SNX2O60749 MIR6844-201ENST00000637122 62 ntBASIC1.6□□□□□ -2.15
SNX2O60749 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
SNX2O60749 RNU6-151P-201ENST00000364158 107 ntBASIC1.59□□□□□ -2.15
SNX2O60749 SNORA25.7-201ENST00000364375 127 ntBASIC1.59□□□□□ -2.15
SNX2O60749 Y_RNA.542-201ENST00000384641 111 ntBASIC1.59□□□□□ -2.15
SNX2O60749 RNU6-955P-201ENST00000410497 104 ntBASIC1.59□□□□□ -2.15
SNX2O60749 AP003484.1-201ENST00000530974 250 ntBASIC1.59□□□□□ -2.15
SNX2O60749 AL512310.8-201ENST00000550183 120 ntBASIC1.59□□□□□ -2.15
SNX2O60749 Y_RNA.778-201ENST00000620203 90 ntBASIC1.59□□□□□ -2.15
SNX2O60749 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SNX2O60749 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
SNX2O60749 RNU4-11P-201ENST00000365287 132 ntBASIC1.58□□□□□ -2.16
SNX2O60749 RNU6-1292P-201ENST00000383856 107 ntBASIC1.58□□□□□ -2.16
SNX2O60749 RNU6-1062P-201ENST00000383908 107 ntBASIC1.58□□□□□ -2.16
SNX2O60749 SNORD53B-201ENST00000577887 78 ntBASIC1.58□□□□□ -2.16
SNX2O60749 MIR4255-201ENST00000579351 72 ntBASIC1.58□□□□□ -2.16
SNX2O60749 AP000942.3-201ENST00000603702 160 ntBASIC1.58□□□□□ -2.16
SNX2O60749 MIR8065-201ENST00000620577 100 ntBASIC1.58□□□□□ -2.16
SNX2O60749 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
SNX2O60749 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.57□□□□□ -2.16
SNX2O60749 Y_RNA.241-201ENST00000364470 117 ntBASIC1.57□□□□□ -2.16
SNX2O60749 RNU6-1189P-201ENST00000383958 107 ntBASIC1.57□□□□□ -2.16
SNX2O60749 SNORD37.2-201ENST00000391075 66 ntBASIC1.57□□□□□ -2.16
SNX2O60749 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.57□□□□□ -2.16
SNX2O60749 AC087499.4-201ENST00000448505 178 ntBASIC1.57□□□□□ -2.16
SNX2O60749 RPS26P48-201ENST00000491713 339 ntBASIC1.57□□□□□ -2.16
SNX2O60749 RNU7-200P-201ENST00000516105 62 ntBASIC1.57□□□□□ -2.16
SNX2O60749 SNORA18.4-201ENST00000516440 124 ntBASIC1.57□□□□□ -2.16
SNX2O60749 MIR4303-201ENST00000581299 66 ntBASIC1.57□□□□□ -2.16
SNX2O60749 AP000648.3-201ENST00000623539 4507 ntBASIC1.56□□□□□ -2.16
SNX2O60749 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.56□□□□□ -2.16
SNX2O60749 Y_RNA.370-201ENST00000365589 108 ntBASIC1.56□□□□□ -2.16
SNX2O60749 Y_RNA.410-201ENST00000383992 113 ntBASIC1.56□□□□□ -2.16
SNX2O60749 MIR624-201ENST00000385217 97 ntBASIC1.56□□□□□ -2.16
SNX2O60749 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
SNX2O60749 SNORA75.5-201ENST00000391291 81 ntBASIC1.56□□□□□ -2.16
SNX2O60749 RNA5SP127-201ENST00000411051 133 ntBASIC1.56□□□□□ -2.16
SNX2O60749 RNU6-346P-201ENST00000516288 111 ntBASIC1.56□□□□□ -2.16
SNX2O60749 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.56□□□□□ -2.16
SNX2O60749 MIR3646-201ENST00000578301 84 ntBASIC1.56□□□□□ -2.16
SNX2O60749 MIR3664-201ENST00000579074 99 ntBASIC1.56□□□□□ -2.16
SNX2O60749 MIR4764-201ENST00000580680 88 ntBASIC1.56□□□□□ -2.16
SNX2O60749 AL096861.1-201ENST00000610899 123 ntBASIC1.56□□□□□ -2.16
SNX2O60749 GHRLOS.1-201ENST00000610995 70 ntBASIC1.56□□□□□ -2.16
SNX2O60749 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.56□□□□□ -2.16
SNX2O60749 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.56□□□□□ -2.16
SNX2O60749 RNU1-42P-201ENST00000364033 160 ntBASIC1.55□□□□□ -2.16
SNX2O60749 Y_RNA.440-201ENST00000384120 114 ntBASIC1.55□□□□□ -2.16
SNX2O60749 Y_RNA.506-201ENST00000384494 102 ntBASIC1.55□□□□□ -2.16
SNX2O60749 MIR520C-201ENST00000385005 87 ntBASIC1.55□□□□□ -2.16
SNX2O60749 AC023790.1-201ENST00000482174 347 ntBASIC1.55□□□□□ -2.16
SNX2O60749 RNU7-41P-201ENST00000515917 61 ntBASIC1.55□□□□□ -2.16
SNX2O60749 RNU6-947P-201ENST00000516264 106 ntBASIC1.55□□□□□ -2.16
SNX2O60749 RN7SKP88-201ENST00000516847 250 ntBASIC1.55□□□□□ -2.16
SNX2O60749 RNU6-165P-201ENST00000517170 99 ntBASIC1.55□□□□□ -2.16
SNX2O60749 MIR5197-201ENST00000583721 112 ntBASIC1.55□□□□□ -2.16
SNX2O60749 MIR3192-201ENST00000584920 77 ntBASIC1.55□□□□□ -2.16
SNX2O60749 7SK.8-201ENST00000612110 250 ntBASIC1.55□□□□□ -2.16
SNX2O60749 7SK.11-201ENST00000615477 250 ntBASIC1.55□□□□□ -2.16
SNX2O60749 7SK.13-201ENST00000622040 250 ntBASIC1.55□□□□□ -2.16
SNX2O60749 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.55□□□□□ -2.16
SNX2O60749 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.54□□□□□ -2.16
SNX2O60749 RNU6-774P-201ENST00000363238 107 ntBASIC1.54□□□□□ -2.16
SNX2O60749 Y_RNA.497-201ENST00000384447 98 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms