Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 RNU7-21P-201ENST00000459430 62 ntBASIC1.07□□□□□ -2.24
SSX4O60224 RNU6-693P-201ENST00000516134 107 ntBASIC1.07□□□□□ -2.24
SSX4O60224 RNA5SP220-201ENST00000516298 104 ntBASIC1.07□□□□□ -2.24
SSX4O60224 RNU6-1299P-201ENST00000516316 100 ntBASIC1.07□□□□□ -2.24
SSX4O60224 RNU6-126P-201ENST00000516685 103 ntBASIC1.07□□□□□ -2.24
SSX4O60224 RNU6-365P-201ENST00000517113 106 ntBASIC1.07□□□□□ -2.24
SSX4O60224 MIR3660-201ENST00000584845 100 ntBASIC1.07□□□□□ -2.24
SSX4O60224 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
SSX4O60224 RNU6-702P-201ENST00000364982 107 ntBASIC1.06□□□□□ -2.24
SSX4O60224 RNU4-17P-201ENST00000365598 141 ntBASIC1.06□□□□□ -2.24
SSX4O60224 RNU6-484P-201ENST00000384016 107 ntBASIC1.06□□□□□ -2.24
SSX4O60224 SNORD61-201ENST00000384252 73 ntBASIC1.06□□□□□ -2.24
SSX4O60224 RNU2-55P-201ENST00000411146 174 ntBASIC1.06□□□□□ -2.24
SSX4O60224 AC002429.1-201ENST00000437672 148 ntBASIC1.06□□□□□ -2.24
SSX4O60224 SNRPGP8-201ENST00000454064 226 ntBASIC1.06□□□□□ -2.24
SSX4O60224 AC109810.1-201ENST00000534066 224 ntBASIC1.06□□□□□ -2.24
SSX4O60224 MIR3128-201ENST00000581957 66 ntBASIC1.06□□□□□ -2.24
SSX4O60224 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
SSX4O60224 AC008163.1-202ENST00000636004 2889 ntBASIC1.06□□□□□ -2.24
SSX4O60224 Y_RNA.20-201ENST00000362479 113 ntBASIC1.05□□□□□ -2.24
SSX4O60224 Y_RNA.91-201ENST00000363042 107 ntBASIC1.05□□□□□ -2.24
SSX4O60224 SNORD114-27-201ENST00000363766 70 ntBASIC1.05□□□□□ -2.24
SSX4O60224 RNU1-124P-201ENST00000363861 145 ntBASIC1.05□□□□□ -2.24
SSX4O60224 SNORD115-28-201ENST00000363931 81 ntBASIC1.05□□□□□ -2.24
SSX4O60224 Y_RNA.193-201ENST00000363979 102 ntBASIC1.05□□□□□ -2.24
SSX4O60224 RNY4P28-201ENST00000365281 93 ntBASIC1.05□□□□□ -2.24
SSX4O60224 Y_RNA.432-201ENST00000384087 111 ntBASIC1.05□□□□□ -2.24
SSX4O60224 Y_RNA.452-201ENST00000384202 108 ntBASIC1.05□□□□□ -2.24
SSX4O60224 SNORA51.10-201ENST00000384418 136 ntBASIC1.05□□□□□ -2.24
SSX4O60224 Y_RNA.537-201ENST00000384626 109 ntBASIC1.05□□□□□ -2.24
SSX4O60224 MIR19B1-201ENST00000384829 87 ntBASIC1.05□□□□□ -2.24
SSX4O60224 MIR548A2-201ENST00000384956 97 ntBASIC1.05□□□□□ -2.24
SSX4O60224 MIR518F-201ENST00000384973 87 ntBASIC1.05□□□□□ -2.24
SSX4O60224 RNU6-1228P-201ENST00000391014 107 ntBASIC1.05□□□□□ -2.24
SSX4O60224 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.05□□□□□ -2.24
SSX4O60224 RNY3P16-201ENST00000516338 101 ntBASIC1.05□□□□□ -2.24
SSX4O60224 Y_RNA.680-201ENST00000516441 93 ntBASIC1.05□□□□□ -2.24
SSX4O60224 RNU6-1270P-201ENST00000517128 108 ntBASIC1.05□□□□□ -2.24
SSX4O60224 MIR3149-201ENST00000584629 83 ntBASIC1.05□□□□□ -2.24
SSX4O60224 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.05□□□□□ -2.24
SSX4O60224 AL162730.1-201ENST00000605734 292 ntBASIC1.05□□□□□ -2.24
SSX4O60224 MIR4791-201ENST00000607666 84 ntBASIC1.05□□□□□ -2.24
SSX4O60224 7SK.10-201ENST00000621414 298 ntBASIC1.05□□□□□ -2.24
SSX4O60224 Y_RNA.199-201ENST00000364014 102 ntBASIC1.04□□□□□ -2.24
SSX4O60224 Y_RNA.634-201ENST00000364811 113 ntBASIC1.04□□□□□ -2.24
SSX4O60224 Y_RNA.330-201ENST00000365230 109 ntBASIC1.04□□□□□ -2.24
SSX4O60224 SNORD24-201ENST00000383884 75 ntBASIC1.04□□□□□ -2.24
SSX4O60224 Y_RNA.478-201ENST00000384358 107 ntBASIC1.04□□□□□ -2.24
SSX4O60224 SNORA26-201ENST00000391286 122 ntBASIC1.04□□□□□ -2.24
SSX4O60224 SNORD58.1-201ENST00000391313 66 ntBASIC1.04□□□□□ -2.24
SSX4O60224 RNU2-70P-201ENST00000410718 179 ntBASIC1.04□□□□□ -2.24
SSX4O60224 RNU6-847P-201ENST00000411115 108 ntBASIC1.04□□□□□ -2.24
SSX4O60224 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.04□□□□□ -2.24
SSX4O60224 RPS29P28-201ENST00000446439 141 ntBASIC1.04□□□□□ -2.24
SSX4O60224 RNU7-90P-201ENST00000459216 62 ntBASIC1.04□□□□□ -2.24
SSX4O60224 RNU2-13P-201ENST00000515909 113 ntBASIC1.04□□□□□ -2.24
SSX4O60224 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.04□□□□□ -2.24
SSX4O60224 RNU6-504P-201ENST00000516568 104 ntBASIC1.04□□□□□ -2.24
SSX4O60224 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.04□□□□□ -2.24
SSX4O60224 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.04□□□□□ -2.24
SSX4O60224 MIR96-201ENST00000362288 78 ntBASIC1.03□□□□□ -2.24
SSX4O60224 Y_RNA.60-201ENST00000362831 98 ntBASIC1.03□□□□□ -2.24
SSX4O60224 Y_RNA.66-201ENST00000362862 102 ntBASIC1.03□□□□□ -2.24
SSX4O60224 RNU6-888P-201ENST00000363010 101 ntBASIC1.03□□□□□ -2.24
SSX4O60224 SNORD45.3-201ENST00000363836 72 ntBASIC1.03□□□□□ -2.24
SSX4O60224 Y_RNA.241-201ENST00000364470 117 ntBASIC1.03□□□□□ -2.24
SSX4O60224 Y_RNA.308-201ENST00000365043 101 ntBASIC1.03□□□□□ -2.24
SSX4O60224 RNU6-463P-201ENST00000384340 107 ntBASIC1.03□□□□□ -2.24
SSX4O60224 Y_RNA.494-201ENST00000384432 111 ntBASIC1.03□□□□□ -2.24
SSX4O60224 MIR1302-7-201ENST00000408841 72 ntBASIC1.03□□□□□ -2.24
SSX4O60224 MRPL35P3-201ENST00000421557 364 ntBASIC1.03□□□□□ -2.24
SSX4O60224 AL392103.1-201ENST00000447000 198 ntBASIC1.03□□□□□ -2.24
SSX4O60224 RPS23P4-201ENST00000487908 423 ntBASIC1.03□□□□□ -2.24
SSX4O60224 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.03□□□□□ -2.24
SSX4O60224 RNA5SP153-201ENST00000516498 76 ntBASIC1.03□□□□□ -2.24
SSX4O60224 SEPT14P17-201ENST00000617978 177 ntBASIC1.03□□□□□ -2.24
SSX4O60224 AC243994.1-201ENST00000618627 109 ntBASIC1.03□□□□□ -2.24
SSX4O60224 MTND1P7-201ENST00000632801 297 ntBASIC1.03□□□□□ -2.24
SSX4O60224 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
SSX4O60224 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
SSX4O60224 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
SSX4O60224 Y_RNA.37-201ENST00000362606 108 ntBASIC1.02□□□□□ -2.25
SSX4O60224 Y_RNA.144-201ENST00000363521 113 ntBASIC1.02□□□□□ -2.25
SSX4O60224 Y_RNA.307-201ENST00000365022 117 ntBASIC1.02□□□□□ -2.25
SSX4O60224 SNORA70.7-201ENST00000384159 133 ntBASIC1.02□□□□□ -2.25
SSX4O60224 Y_RNA.447-201ENST00000384184 113 ntBASIC1.02□□□□□ -2.25
SSX4O60224 RNU6-938P-201ENST00000411285 103 ntBASIC1.02□□□□□ -2.25
SSX4O60224 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.02□□□□□ -2.25
SSX4O60224 AC087499.4-201ENST00000448505 178 ntBASIC1.02□□□□□ -2.25
SSX4O60224 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.02□□□□□ -2.25
SSX4O60224 AC107297.1-201ENST00000459991 176 ntBASIC1.02□□□□□ -2.25
SSX4O60224 AC087343.1-201ENST00000477341 475 ntBASIC1.02□□□□□ -2.25
SSX4O60224 RNU6-561P-201ENST00000516222 102 ntBASIC1.02□□□□□ -2.25
SSX4O60224 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.02□□□□□ -2.25
SSX4O60224 SNORD115-34-201ENST00000362441 82 ntBASIC1.01□□□□□ -2.25
SSX4O60224 SNORD115-12-201ENST00000362583 82 ntBASIC1.01□□□□□ -2.25
SSX4O60224 SNORD115-29-201ENST00000362834 82 ntBASIC1.01□□□□□ -2.25
SSX4O60224 SNORD115-9-201ENST00000362912 82 ntBASIC1.01□□□□□ -2.25
SSX4O60224 SNORD115-21-201ENST00000362963 81 ntBASIC1.01□□□□□ -2.25
SSX4O60224 SNORD115-14-201ENST00000363090 81 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms