Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 RPS3AP52-201ENST00000435639 297 ntBASIC-0.52□□□□□ -2.49
SGCEO43556 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-0.52□□□□□ -2.49
SGCEO43556 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-0.52□□□□□ -2.49
SGCEO43556 MIR548AD-201ENST00000584780 82 ntBASIC-0.52□□□□□ -2.49
SGCEO43556 MIR4436A-201ENST00000585278 85 ntBASIC-0.52□□□□□ -2.49
SGCEO43556 uc_338.28-201ENST00000612082 187 ntBASIC-0.52□□□□□ -2.49
SGCEO43556 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.53□□□□□ -2.49
SGCEO43556 SNORD114-11-201ENST00000363738 75 ntBASIC-0.53□□□□□ -2.49
SGCEO43556 RNU6-480P-201ENST00000384332 107 ntBASIC-0.53□□□□□ -2.49
SGCEO43556 SNORD12C-201ENST00000386307 89 ntBASIC-0.53□□□□□ -2.49
SGCEO43556 MIR548K-201ENST00000408406 116 ntBASIC-0.53□□□□□ -2.49
SGCEO43556 HMGN1P33-201ENST00000432945 451 ntBASIC-0.53□□□□□ -2.49
SGCEO43556 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-0.53□□□□□ -2.49
SGCEO43556 AL138752.1-201ENST00000452964 351 ntBASIC-0.53□□□□□ -2.49
SGCEO43556 RPS29P25-201ENST00000481709 171 ntBASIC-0.53□□□□□ -2.49
SGCEO43556 RNU6-314P-201ENST00000516574 104 ntBASIC-0.53□□□□□ -2.49
SGCEO43556 AC144568.1-201ENST00000520139 137 ntBASIC-0.53□□□□□ -2.49
SGCEO43556 AC006600.1-201ENST00000572529 153 ntBASIC-0.53□□□□□ -2.49
SGCEO43556 MIR4659A-201ENST00000580269 81 ntBASIC-0.53□□□□□ -2.49
SGCEO43556 AC015540.1-201ENST00000615828 501 ntBASIC-0.53□□□□□ -2.49
SGCEO43556 MIR6759-201ENST00000638110 65 ntBASIC-0.53□□□□□ -2.49
SGCEO43556 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.54□□□□□ -2.5
SGCEO43556 RNU6-1156P-201ENST00000410365 100 ntBASIC-0.54□□□□□ -2.5
SGCEO43556 MTND3P10-201ENST00000450967 341 ntBASIC-0.54□□□□□ -2.5
SGCEO43556 RPL30P15-201ENST00000457129 321 ntBASIC-0.54□□□□□ -2.5
SGCEO43556 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.54□□□□□ -2.5
SGCEO43556 AC114755.3-201ENST00000481111 251 ntBASIC-0.54□□□□□ -2.5
SGCEO43556 AC063944.3-201ENST00000609969 533 ntBASIC-0.54□□□□□ -2.5
SGCEO43556 AL391099.1-201ENST00000624635 187 ntBASIC-0.54□□□□□ -2.5
SGCEO43556 SNORD115-28-201ENST00000363931 81 ntBASIC-0.55□□□□□ -2.5
SGCEO43556 Y_RNA.404-201ENST00000383978 102 ntBASIC-0.55□□□□□ -2.5
SGCEO43556 SNORA27-201ENST00000384323 126 ntBASIC-0.55□□□□□ -2.5
SGCEO43556 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.55□□□□□ -2.5
SGCEO43556 RNU6-735P-201ENST00000410612 107 ntBASIC-0.55□□□□□ -2.5
SGCEO43556 RPS29P24-201ENST00000486345 171 ntBASIC-0.55□□□□□ -2.5
SGCEO43556 RNU6-506P-201ENST00000516553 94 ntBASIC-0.55□□□□□ -2.5
SGCEO43556 RNU7-4P-201ENST00000516961 62 ntBASIC-0.55□□□□□ -2.5
SGCEO43556 RNU6-897P-201ENST00000517135 105 ntBASIC-0.55□□□□□ -2.5
SGCEO43556 RNU2-60P-201ENST00000517290 128 ntBASIC-0.55□□□□□ -2.5
SGCEO43556 AC131281.1-201ENST00000522984 164 ntBASIC-0.55□□□□□ -2.5
SGCEO43556 AC124312.5-201ENST00000604451 268 ntBASIC-0.55□□□□□ -2.5
SGCEO43556 MIR6082-201ENST00000613604 109 ntBASIC-0.55□□□□□ -2.5
SGCEO43556 AC244669.1-204ENST00000621564 178 ntBASIC-0.55□□□□□ -2.5
SGCEO43556 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.56□□□□□ -2.5
SGCEO43556 MIR224-201ENST00000384889 81 ntBASIC-0.56□□□□□ -2.5
SGCEO43556 MIR548F5-201ENST00000408421 86 ntBASIC-0.56□□□□□ -2.5
SGCEO43556 RNU2-16P-201ENST00000410712 136 ntBASIC-0.56□□□□□ -2.5
SGCEO43556 AL022718.1-201ENST00000412004 84 ntBASIC-0.56□□□□□ -2.5
SGCEO43556 AC107399.1-201ENST00000451226 265 ntBASIC-0.56□□□□□ -2.5
SGCEO43556 AC074198.2-201ENST00000508153 258 ntBASIC-0.56□□□□□ -2.5
SGCEO43556 RNU6-765P-201ENST00000516916 99 ntBASIC-0.56□□□□□ -2.5
SGCEO43556 RNU6-264P-201ENST00000517134 104 ntBASIC-0.56□□□□□ -2.5
SGCEO43556 AC007751.1-201ENST00000529260 376 ntBASIC-0.56□□□□□ -2.5
SGCEO43556 MIR3925-201ENST00000584674 77 ntBASIC-0.56□□□□□ -2.5
SGCEO43556 AL442067.1-201ENST00000613261 223 ntBASIC-0.56□□□□□ -2.5
SGCEO43556 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.56□□□□□ -2.5
SGCEO43556 MIR101-1-201ENST00000362265 75 ntBASIC-0.57□□□□□ -2.5
SGCEO43556 RNU6-403P-201ENST00000363163 104 ntBASIC-0.57□□□□□ -2.5
SGCEO43556 RNU4-84P-201ENST00000364200 139 ntBASIC-0.57□□□□□ -2.5
SGCEO43556 Y_RNA.570-201ENST00000384750 101 ntBASIC-0.57□□□□□ -2.5
SGCEO43556 RNU6-510P-201ENST00000391239 108 ntBASIC-0.57□□□□□ -2.5
SGCEO43556 CR383656.4-201ENST00000546909 122 ntBASIC-0.57□□□□□ -2.5
SGCEO43556 DEFB117-201ENST00000602356 141 ntBASIC-0.57□□□□□ -2.5
SGCEO43556 AC096720.1-201ENST00000604441 183 ntBASIC-0.57□□□□□ -2.5
SGCEO43556 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-0.57□□□□□ -2.5
SGCEO43556 AC011476.5-201ENST00000615594 130 ntBASIC-0.57□□□□□ -2.5
SGCEO43556 MIR4788-201ENST00000639104 80 ntBASIC-0.57□□□□□ -2.5
SGCEO43556 Y_RNA.9-201ENST00000362354 101 ntBASIC-0.58□□□□□ -2.5
SGCEO43556 RNY4P14-201ENST00000363656 96 ntBASIC-0.58□□□□□ -2.5
SGCEO43556 SNORD49B-201ENST00000365172 72 ntBASIC-0.58□□□□□ -2.5
SGCEO43556 Y_RNA.573-201ENST00000384763 105 ntBASIC-0.58□□□□□ -2.5
SGCEO43556 MIR181A1-201ENST00000385026 110 ntBASIC-0.58□□□□□ -2.5
SGCEO43556 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-0.58□□□□□ -2.5
SGCEO43556 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-0.58□□□□□ -2.5
SGCEO43556 AP001328.1-201ENST00000528550 176 ntBASIC-0.58□□□□□ -2.5
SGCEO43556 MIR4432-201ENST00000581823 84 ntBASIC-0.58□□□□□ -2.5
SGCEO43556 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.58□□□□□ -2.5
SGCEO43556 MIR6514-201ENST00000622549 70 ntBASIC-0.58□□□□□ -2.5
SGCEO43556 AC022140.2-201ENST00000623500 188 ntBASIC-0.58□□□□□ -2.5
SGCEO43556 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.59□□□□□ -2.5
SGCEO43556 MIR148A-201ENST00000362215 68 ntBASIC-0.59□□□□□ -2.5
SGCEO43556 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.59□□□□□ -2.5
SGCEO43556 Y_RNA.331-201ENST00000365267 102 ntBASIC-0.59□□□□□ -2.5
SGCEO43556 RNU6-291P-201ENST00000384720 107 ntBASIC-0.59□□□□□ -2.5
SGCEO43556 SNORD77.3-201ENST00000391113 65 ntBASIC-0.59□□□□□ -2.5
SGCEO43556 RNU4-63P-201ENST00000411313 118 ntBASIC-0.59□□□□□ -2.5
SGCEO43556 RNU7-141P-201ENST00000459304 62 ntBASIC-0.59□□□□□ -2.5
SGCEO43556 RNU7-149P-201ENST00000516739 59 ntBASIC-0.59□□□□□ -2.5
SGCEO43556 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.59□□□□□ -2.5
SGCEO43556 MIR5589-201ENST00000579442 60 ntBASIC-0.59□□□□□ -2.5
SGCEO43556 MIR5706-201ENST00000579841 80 ntBASIC-0.59□□□□□ -2.5
SGCEO43556 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-0.59□□□□□ -2.5
SGCEO43556 U7.6-201ENST00000610841 64 ntBASIC-0.59□□□□□ -2.5
SGCEO43556 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.6□□□□□ -2.51
SGCEO43556 MIR604-201ENST00000384880 94 ntBASIC-0.6□□□□□ -2.51
SGCEO43556 RNA5SP237-201ENST00000410414 113 ntBASIC-0.6□□□□□ -2.51
SGCEO43556 Y_RNA.605-201ENST00000410577 105 ntBASIC-0.6□□□□□ -2.51
SGCEO43556 AC109327.2-201ENST00000448339 378 ntBASIC-0.6□□□□□ -2.51
SGCEO43556 RNU6-1170P-201ENST00000515974 106 ntBASIC-0.6□□□□□ -2.51
SGCEO43556 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.6□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 294.6 ms