Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HOXA2O43364 Y_RNA.426-201ENST00000384068 113 ntBASIC3.27□□□□□ -1.89
HOXA2O43364 U8.15-201ENST00000390947 134 ntBASIC3.27□□□□□ -1.89
HOXA2O43364 RNU6-279P-201ENST00000391297 101 ntBASIC3.27□□□□□ -1.89
HOXA2O43364 RNU2-7P-201ENST00000410794 178 ntBASIC3.27□□□□□ -1.89
HOXA2O43364 Y_RNA.620-201ENST00000411009 88 ntBASIC3.27□□□□□ -1.89
HOXA2O43364 AC093850.1-201ENST00000454121 251 ntBASIC3.27□□□□□ -1.89
HOXA2O43364 HMGN1P18-201ENST00000457642 277 ntBASIC3.27□□□□□ -1.89
HOXA2O43364 RNU7-26P-201ENST00000458980 63 ntBASIC3.27□□□□□ -1.89
HOXA2O43364 SNORD123-201ENST00000459473 70 ntBASIC3.27□□□□□ -1.89
HOXA2O43364 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.27□□□□□ -1.89
HOXA2O43364 MIR376B-201ENST00000614515 100 ntBASIC3.27□□□□□ -1.89
HOXA2O43364 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.26□□□□□ -1.89
HOXA2O43364 Y_RNA.437-201ENST00000384113 113 ntBASIC3.26□□□□□ -1.89
HOXA2O43364 MIR520A-201ENST00000384862 85 ntBASIC3.26□□□□□ -1.89
HOXA2O43364 RNU6-913P-201ENST00000390913 95 ntBASIC3.26□□□□□ -1.89
HOXA2O43364 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC3.26□□□□□ -1.89
HOXA2O43364 RNA5SP385-201ENST00000515947 110 ntBASIC3.26□□□□□ -1.89
HOXA2O43364 RNU7-2P-201ENST00000516096 62 ntBASIC3.26□□□□□ -1.89
HOXA2O43364 MIR4666B-201ENST00000578142 81 ntBASIC3.26□□□□□ -1.89
HOXA2O43364 MIR548AR-201ENST00000582191 57 ntBASIC3.26□□□□□ -1.89
HOXA2O43364 AL513423.1-201ENST00000621695 132 ntBASIC3.26□□□□□ -1.89
HOXA2O43364 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.26□□□□□ -1.89
HOXA2O43364 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.26□□□□□ -1.89
HOXA2O43364 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HOXA2O43364 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.25□□□□□ -1.89
HOXA2O43364 SNORD58A-201ENST00000383875 65 ntBASIC3.25□□□□□ -1.89
HOXA2O43364 SNORD28B-201ENST00000390993 75 ntBASIC3.25□□□□□ -1.89
HOXA2O43364 RPL32P35-201ENST00000415214 394 ntBASIC3.25□□□□□ -1.89
HOXA2O43364 AC090844.1-201ENST00000422019 156 ntBASIC3.25□□□□□ -1.89
HOXA2O43364 RNA5SP356-201ENST00000515972 94 ntBASIC3.25□□□□□ -1.89
HOXA2O43364 GTF3AP2-201ENST00000557014 266 ntBASIC3.25□□□□□ -1.89
HOXA2O43364 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
HOXA2O43364 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
HOXA2O43364 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HOXA2O43364 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.24□□□□□ -1.89
HOXA2O43364 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.24□□□□□ -1.89
HOXA2O43364 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
HOXA2O43364 RNU6-787P-201ENST00000384032 107 ntBASIC3.24□□□□□ -1.89
HOXA2O43364 RNY1P4-201ENST00000384595 115 ntBASIC3.24□□□□□ -1.89
HOXA2O43364 RNU6ATAC41P-201ENST00000408600 126 ntBASIC3.24□□□□□ -1.89
HOXA2O43364 RNA5SP137-201ENST00000516833 135 ntBASIC3.24□□□□□ -1.89
HOXA2O43364 MIR4672-201ENST00000583126 81 ntBASIC3.24□□□□□ -1.89
HOXA2O43364 SNORD38.1-201ENST00000363863 68 ntBASIC3.23□□□□□ -1.89
HOXA2O43364 Y_RNA.221-201ENST00000364248 96 ntBASIC3.23□□□□□ -1.89
HOXA2O43364 Y_RNA.537-201ENST00000384626 109 ntBASIC3.23□□□□□ -1.89
HOXA2O43364 RNA5SP465-201ENST00000391195 109 ntBASIC3.23□□□□□ -1.89
HOXA2O43364 MIR887-201ENST00000401258 79 ntBASIC3.23□□□□□ -1.89
HOXA2O43364 RNA5SP217-201ENST00000515959 91 ntBASIC3.23□□□□□ -1.89
HOXA2O43364 SCARNA16.3-201ENST00000516595 184 ntBASIC3.23□□□□□ -1.89
HOXA2O43364 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
HOXA2O43364 MIR4709-201ENST00000577272 72 ntBASIC3.23□□□□□ -1.89
HOXA2O43364 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
HOXA2O43364 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HOXA2O43364 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
HOXA2O43364 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HOXA2O43364 AC073325.2-201ENST00000339545 159 ntBASIC3.22□□□□□ -1.89
HOXA2O43364 SNORA9.2-201ENST00000365361 133 ntBASIC3.22□□□□□ -1.89
HOXA2O43364 RNU1-148P-201ENST00000384472 162 ntBASIC3.22□□□□□ -1.89
HOXA2O43364 MIR660-201ENST00000385235 97 ntBASIC3.22□□□□□ -1.89
HOXA2O43364 AC105272.1-201ENST00000438604 198 ntBASIC3.22□□□□□ -1.89
HOXA2O43364 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.22□□□□□ -1.89
HOXA2O43364 snoU13.16-201ENST00000459350 104 ntBASIC3.22□□□□□ -1.89
HOXA2O43364 MIR3162-201ENST00000581818 82 ntBASIC3.22□□□□□ -1.89
HOXA2O43364 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.22□□□□□ -1.89
HOXA2O43364 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HOXA2O43364 RNU6-1296P-201ENST00000383879 107 ntBASIC3.21□□□□□ -1.9
HOXA2O43364 AL445685.2-201ENST00000422551 342 ntBASIC3.21□□□□□ -1.9
HOXA2O43364 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.21□□□□□ -1.9
HOXA2O43364 AC245047.7-201ENST00000440265 293 ntBASIC3.21□□□□□ -1.9
HOXA2O43364 RPS29P28-201ENST00000446439 141 ntBASIC3.21□□□□□ -1.9
HOXA2O43364 RNU6-857P-201ENST00000515893 110 ntBASIC3.21□□□□□ -1.9
HOXA2O43364 MIR4506-201ENST00000584693 77 ntBASIC3.21□□□□□ -1.9
HOXA2O43364 AC103810.7-201ENST00000607821 91 ntBASIC3.21□□□□□ -1.9
HOXA2O43364 AC021506.2-201ENST00000612354 169 ntBASIC3.21□□□□□ -1.9
HOXA2O43364 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC3.21□□□□□ -1.9
HOXA2O43364 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HOXA2O43364 VTRNA1-1-201ENST00000363120 99 ntBASIC3.2□□□□□ -1.9
HOXA2O43364 Y_RNA.140-201ENST00000363474 103 ntBASIC3.2□□□□□ -1.9
HOXA2O43364 RNU6-1125P-201ENST00000363601 107 ntBASIC3.2□□□□□ -1.9
HOXA2O43364 Y_RNA.313-201ENST00000365095 103 ntBASIC3.2□□□□□ -1.9
HOXA2O43364 Y_RNA.354-201ENST00000365448 111 ntBASIC3.2□□□□□ -1.9
HOXA2O43364 MIR206-201ENST00000384872 86 ntBASIC3.2□□□□□ -1.9
HOXA2O43364 MIR526A1-201ENST00000384897 85 ntBASIC3.2□□□□□ -1.9
HOXA2O43364 RNA5SP274-201ENST00000410484 108 ntBASIC3.2□□□□□ -1.9
HOXA2O43364 Y_RNA.611-201ENST00000410682 108 ntBASIC3.2□□□□□ -1.9
HOXA2O43364 HMGN1P33-201ENST00000432945 451 ntBASIC3.2□□□□□ -1.9
HOXA2O43364 UBL5P1-201ENST00000507979 193 ntBASIC3.2□□□□□ -1.9
HOXA2O43364 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HOXA2O43364 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC3.2□□□□□ -1.9
HOXA2O43364 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.2□□□□□ -1.9
HOXA2O43364 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
HOXA2O43364 Y_RNA.247-201ENST00000364500 92 ntBASIC3.19□□□□□ -1.9
HOXA2O43364 MIR1283-2-201ENST00000408621 87 ntBASIC3.19□□□□□ -1.9
HOXA2O43364 RNA5SP184-201ENST00000411071 108 ntBASIC3.19□□□□□ -1.9
HOXA2O43364 HMGN2P3-201ENST00000433603 273 ntBASIC3.19□□□□□ -1.9
HOXA2O43364 HMGN2P5-201ENST00000436882 273 ntBASIC3.19□□□□□ -1.9
HOXA2O43364 RPS12P2-201ENST00000439728 269 ntBASIC3.19□□□□□ -1.9
HOXA2O43364 RNVU1-2-201ENST00000516326 135 ntBASIC3.19□□□□□ -1.9
HOXA2O43364 RNA5SP481-201ENST00000516814 122 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms