Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 SNORA38-201ENST00000363946 132 ntBASIC2.39□□□□□ -2.03
SRGAP3O43295 RNU6-756P-201ENST00000383997 107 ntBASIC2.39□□□□□ -2.03
SRGAP3O43295 RNU1-148P-201ENST00000384472 162 ntBASIC2.39□□□□□ -2.03
SRGAP3O43295 RNU11-3P-201ENST00000391111 133 ntBASIC2.39□□□□□ -2.03
SRGAP3O43295 MIR1302-5-201ENST00000408164 150 ntBASIC2.39□□□□□ -2.03
SRGAP3O43295 MIR1289-2-201ENST00000408360 111 ntBASIC2.39□□□□□ -2.03
SRGAP3O43295 RNY4P30-201ENST00000410216 95 ntBASIC2.39□□□□□ -2.03
SRGAP3O43295 HMGN2P38-201ENST00000423806 265 ntBASIC2.39□□□□□ -2.03
SRGAP3O43295 RNU7-80P-201ENST00000459562 61 ntBASIC2.39□□□□□ -2.03
SRGAP3O43295 RPL39P34-201ENST00000477141 156 ntBASIC2.39□□□□□ -2.03
SRGAP3O43295 SNORA31.10-201ENST00000516482 106 ntBASIC2.39□□□□□ -2.03
SRGAP3O43295 Y_RNA.694-201ENST00000516677 117 ntBASIC2.39□□□□□ -2.03
SRGAP3O43295 AC091932.4-201ENST00000623386 200 ntBASIC2.39□□□□□ -2.03
SRGAP3O43295 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.39□□□□□ -2.03
SRGAP3O43295 Y_RNA.49-201ENST00000362714 112 ntBASIC2.38□□□□□ -2.03
SRGAP3O43295 Y_RNA.241-201ENST00000364470 117 ntBASIC2.38□□□□□ -2.03
SRGAP3O43295 Y_RNA.298-201ENST00000364960 107 ntBASIC2.38□□□□□ -2.03
SRGAP3O43295 RNA5SP138-201ENST00000365098 114 ntBASIC2.38□□□□□ -2.03
SRGAP3O43295 SNORA51.5-201ENST00000384126 131 ntBASIC2.38□□□□□ -2.03
SRGAP3O43295 RNU7-123P-201ENST00000515911 60 ntBASIC2.38□□□□□ -2.03
SRGAP3O43295 RPPH1-2P-201ENST00000516688 293 ntBASIC2.38□□□□□ -2.03
SRGAP3O43295 MIR5582-201ENST00000579697 68 ntBASIC2.38□□□□□ -2.03
SRGAP3O43295 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SRGAP3O43295 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.38□□□□□ -2.03
SRGAP3O43295 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.38□□□□□ -2.03
SRGAP3O43295 RNY4P6-201ENST00000363667 96 ntBASIC2.37□□□□□ -2.03
SRGAP3O43295 Y_RNA.362-201ENST00000365518 110 ntBASIC2.37□□□□□ -2.03
SRGAP3O43295 Y_RNA.454-201ENST00000384224 113 ntBASIC2.37□□□□□ -2.03
SRGAP3O43295 AC019129.1-201ENST00000403786 261 ntBASIC2.37□□□□□ -2.03
SRGAP3O43295 RN7SKP200-201ENST00000410564 320 ntBASIC2.37□□□□□ -2.03
SRGAP3O43295 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.37□□□□□ -2.03
SRGAP3O43295 AC069257.2-201ENST00000441819 155 ntBASIC2.37□□□□□ -2.03
SRGAP3O43295 RNU6-830P-201ENST00000516353 107 ntBASIC2.37□□□□□ -2.03
SRGAP3O43295 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.37□□□□□ -2.03
SRGAP3O43295 HSPE1P19-201ENST00000603327 295 ntBASIC2.37□□□□□ -2.03
SRGAP3O43295 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.37□□□□□ -2.03
SRGAP3O43295 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SRGAP3O43295 MIRLET7C-201ENST00000362160 84 ntBASIC2.36□□□□□ -2.03
SRGAP3O43295 RNU6-766P-201ENST00000362478 107 ntBASIC2.36□□□□□ -2.03
SRGAP3O43295 RNU6-1014P-201ENST00000383940 103 ntBASIC2.36□□□□□ -2.03
SRGAP3O43295 RNU6-424P-201ENST00000384367 105 ntBASIC2.36□□□□□ -2.03
SRGAP3O43295 U8.16-201ENST00000391279 133 ntBASIC2.36□□□□□ -2.03
SRGAP3O43295 AL627390.1-201ENST00000396055 340 ntBASIC2.36□□□□□ -2.03
SRGAP3O43295 AL034345.1-201ENST00000407768 123 ntBASIC2.36□□□□□ -2.03
SRGAP3O43295 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.36□□□□□ -2.03
SRGAP3O43295 AC003989.2-201ENST00000440224 169 ntBASIC2.36□□□□□ -2.03
SRGAP3O43295 AC022523.2-201ENST00000561045 150 ntBASIC2.36□□□□□ -2.03
SRGAP3O43295 MIR4778-201ENST00000577635 80 ntBASIC2.36□□□□□ -2.03
SRGAP3O43295 MIR4305-201ENST00000583252 102 ntBASIC2.36□□□□□ -2.03
SRGAP3O43295 MIR6840-201ENST00000611937 71 ntBASIC2.36□□□□□ -2.03
SRGAP3O43295 Y_RNA.328-201ENST00000365208 113 ntBASIC2.35□□□□□ -2.03
SRGAP3O43295 SNORA4.2-201ENST00000365313 147 ntBASIC2.35□□□□□ -2.03
SRGAP3O43295 SNORA27-201ENST00000384323 126 ntBASIC2.35□□□□□ -2.03
SRGAP3O43295 MT-TI-201ENST00000387365 69 ntBASIC2.35□□□□□ -2.03
SRGAP3O43295 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
SRGAP3O43295 U8.13-201ENST00000390842 128 ntBASIC2.35□□□□□ -2.03
SRGAP3O43295 AL445685.2-201ENST00000422551 342 ntBASIC2.35□□□□□ -2.03
SRGAP3O43295 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.35□□□□□ -2.03
SRGAP3O43295 AC090821.2-201ENST00000523552 176 ntBASIC2.35□□□□□ -2.03
SRGAP3O43295 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.35□□□□□ -2.03
SRGAP3O43295 MIR4448-201ENST00000584360 86 ntBASIC2.35□□□□□ -2.03
SRGAP3O43295 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.35□□□□□ -2.03
SRGAP3O43295 AC027279.3-201ENST00000625055 122 ntBASIC2.35□□□□□ -2.03
SRGAP3O43295 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SRGAP3O43295 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
SRGAP3O43295 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.34□□□□□ -2.03
SRGAP3O43295 AC015922.2-201ENST00000435593 184 ntBASIC2.34□□□□□ -2.03
SRGAP3O43295 AC011753.1-201ENST00000451001 220 ntBASIC2.34□□□□□ -2.03
SRGAP3O43295 RNU7-12P-201ENST00000516030 62 ntBASIC2.34□□□□□ -2.03
SRGAP3O43295 RNU7-181P-201ENST00000517234 74 ntBASIC2.34□□□□□ -2.03
SRGAP3O43295 AC078899.2-201ENST00000595282 212 ntBASIC2.34□□□□□ -2.03
SRGAP3O43295 MIR302B-201ENST00000362188 73 ntBASIC2.33□□□□□ -2.04
SRGAP3O43295 SNORA51.10-201ENST00000384418 136 ntBASIC2.33□□□□□ -2.04
SRGAP3O43295 RNU6-950P-201ENST00000384651 107 ntBASIC2.33□□□□□ -2.04
SRGAP3O43295 RNU6-1104P-201ENST00000384723 104 ntBASIC2.33□□□□□ -2.04
SRGAP3O43295 RNU2-7P-201ENST00000410794 178 ntBASIC2.33□□□□□ -2.04
SRGAP3O43295 AL035398.1-201ENST00000430869 322 ntBASIC2.33□□□□□ -2.04
SRGAP3O43295 RNU7-34P-201ENST00000459394 64 ntBASIC2.33□□□□□ -2.04
SRGAP3O43295 RNA5SP168-201ENST00000516642 112 ntBASIC2.33□□□□□ -2.04
SRGAP3O43295 RNA5SP137-201ENST00000516833 135 ntBASIC2.33□□□□□ -2.04
SRGAP3O43295 MIR4658-201ENST00000584344 65 ntBASIC2.33□□□□□ -2.04
SRGAP3O43295 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SRGAP3O43295 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SRGAP3O43295 U8.6-201ENST00000364939 135 ntBASIC2.32□□□□□ -2.04
SRGAP3O43295 Y_RNA.323-201ENST00000365157 109 ntBASIC2.32□□□□□ -2.04
SRGAP3O43295 MIR516B2-201ENST00000385190 85 ntBASIC2.32□□□□□ -2.04
SRGAP3O43295 SNORA40.18-201ENST00000391200 128 ntBASIC2.32□□□□□ -2.04
SRGAP3O43295 MIR1283-2-201ENST00000408621 87 ntBASIC2.32□□□□□ -2.04
SRGAP3O43295 RNA5SP182-201ENST00000516064 82 ntBASIC2.32□□□□□ -2.04
SRGAP3O43295 RNVU1-2-201ENST00000516326 135 ntBASIC2.32□□□□□ -2.04
SRGAP3O43295 RNU2-35P-201ENST00000516446 142 ntBASIC2.32□□□□□ -2.04
SRGAP3O43295 MIR3163-201ENST00000581592 73 ntBASIC2.32□□□□□ -2.04
SRGAP3O43295 MIR7843-201ENST00000622274 79 ntBASIC2.32□□□□□ -2.04
SRGAP3O43295 AP000648.3-201ENST00000623539 4507 ntBASIC2.32□□□□□ -2.04
SRGAP3O43295 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
SRGAP3O43295 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
SRGAP3O43295 Y_RNA.344-201ENST00000365381 112 ntBASIC2.31□□□□□ -2.04
SRGAP3O43295 RNU6-1113P-201ENST00000384348 107 ntBASIC2.31□□□□□ -2.04
SRGAP3O43295 RNU6-905P-201ENST00000384434 107 ntBASIC2.31□□□□□ -2.04
SRGAP3O43295 MIR548D2-201ENST00000384955 97 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms