Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
PHF1O43189 Y_RNA.66-201ENST00000362862 102 ntBASIC1.1□□□□□ -2.23
PHF1O43189 Y_RNA.75-201ENST00000362927 97 ntBASIC1.1□□□□□ -2.23
PHF1O43189 RNU6-923P-201ENST00000364753 107 ntBASIC1.1□□□□□ -2.23
PHF1O43189 RNU6-47P-201ENST00000383866 107 ntBASIC1.1□□□□□ -2.23
PHF1O43189 Y_RNA.486-201ENST00000384398 107 ntBASIC1.1□□□□□ -2.23
PHF1O43189 AC015922.2-201ENST00000435593 184 ntBASIC1.1□□□□□ -2.23
PHF1O43189 SNRPGP8-201ENST00000454064 226 ntBASIC1.1□□□□□ -2.23
PHF1O43189 RPS29P29-201ENST00000456396 171 ntBASIC1.1□□□□□ -2.23
PHF1O43189 AC079140.2-201ENST00000506193 142 ntBASIC1.1□□□□□ -2.23
PHF1O43189 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.1□□□□□ -2.23
PHF1O43189 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.1□□□□□ -2.23
PHF1O43189 AC109810.1-201ENST00000534066 224 ntBASIC1.1□□□□□ -2.23
PHF1O43189 Pinc.1-201ENST00000616452 154 ntBASIC1.1□□□□□ -2.23
PHF1O43189 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
PHF1O43189 Y_RNA.30-201ENST00000362572 97 ntBASIC1.09□□□□□ -2.23
PHF1O43189 SNORD45.3-201ENST00000363836 72 ntBASIC1.09□□□□□ -2.23
PHF1O43189 RNU6-275P-201ENST00000364910 107 ntBASIC1.09□□□□□ -2.23
PHF1O43189 Y_RNA.297-201ENST00000364950 91 ntBASIC1.09□□□□□ -2.23
PHF1O43189 SNORD24-201ENST00000383884 75 ntBASIC1.09□□□□□ -2.23
PHF1O43189 MIR548A2-201ENST00000384956 97 ntBASIC1.09□□□□□ -2.23
PHF1O43189 MIR15B-201ENST00000385045 98 ntBASIC1.09□□□□□ -2.23
PHF1O43189 RNU6-578P-201ENST00000390980 103 ntBASIC1.09□□□□□ -2.23
PHF1O43189 Y_RNA.644-201ENST00000459006 113 ntBASIC1.09□□□□□ -2.23
PHF1O43189 AC004223.1-201ENST00000479840 271 ntBASIC1.09□□□□□ -2.23
PHF1O43189 RNU4-57P-201ENST00000515980 135 ntBASIC1.09□□□□□ -2.23
PHF1O43189 Y_RNA.674-201ENST00000516362 113 ntBASIC1.09□□□□□ -2.23
PHF1O43189 AC068338.1-201ENST00000565567 176 ntBASIC1.09□□□□□ -2.23
PHF1O43189 MIR8063-201ENST00000621930 81 ntBASIC1.09□□□□□ -2.23
PHF1O43189 AC106754.2-201ENST00000623006 233 ntBASIC1.09□□□□□ -2.23
PHF1O43189 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.08□□□□□ -2.24
PHF1O43189 RNU6-888P-201ENST00000363010 101 ntBASIC1.08□□□□□ -2.24
PHF1O43189 RNU6-1020P-201ENST00000363684 107 ntBASIC1.08□□□□□ -2.24
PHF1O43189 Y_RNA.178-201ENST00000363832 102 ntBASIC1.08□□□□□ -2.24
PHF1O43189 RNU6-1318P-201ENST00000365389 103 ntBASIC1.08□□□□□ -2.24
PHF1O43189 Y_RNA.432-201ENST00000384087 111 ntBASIC1.08□□□□□ -2.24
PHF1O43189 RNY1P4-201ENST00000384595 115 ntBASIC1.08□□□□□ -2.24
PHF1O43189 MIR136-201ENST00000385207 82 ntBASIC1.08□□□□□ -2.24
PHF1O43189 RNU2-64P-201ENST00000411315 191 ntBASIC1.08□□□□□ -2.24
PHF1O43189 RNU7-120P-201ENST00000459334 63 ntBASIC1.08□□□□□ -2.24
PHF1O43189 RNU6-561P-201ENST00000516222 102 ntBASIC1.08□□□□□ -2.24
PHF1O43189 RNU6-197P-201ENST00000516680 100 ntBASIC1.08□□□□□ -2.24
PHF1O43189 RNU6-165P-201ENST00000517170 99 ntBASIC1.08□□□□□ -2.24
PHF1O43189 AC007751.1-201ENST00000529260 376 ntBASIC1.08□□□□□ -2.24
PHF1O43189 MRPS18CP4-201ENST00000535821 231 ntBASIC1.08□□□□□ -2.24
PHF1O43189 AC072026.1-201ENST00000605023 201 ntBASIC1.08□□□□□ -2.24
PHF1O43189 RNU2-4P-201ENST00000606190 192 ntBASIC1.08□□□□□ -2.24
PHF1O43189 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
PHF1O43189 Y_RNA.233-201ENST00000364407 101 ntBASIC1.07□□□□□ -2.24
PHF1O43189 Y_RNA.634-201ENST00000364811 113 ntBASIC1.07□□□□□ -2.24
PHF1O43189 RNU6-728P-201ENST00000365375 104 ntBASIC1.07□□□□□ -2.24
PHF1O43189 Y_RNA.412-201ENST00000384001 104 ntBASIC1.07□□□□□ -2.24
PHF1O43189 SNORD38C-201ENST00000384381 69 ntBASIC1.07□□□□□ -2.24
PHF1O43189 RNU6-1065P-201ENST00000384513 106 ntBASIC1.07□□□□□ -2.24
PHF1O43189 MIR518F-201ENST00000384973 87 ntBASIC1.07□□□□□ -2.24
PHF1O43189 SNORA26-201ENST00000391286 122 ntBASIC1.07□□□□□ -2.24
PHF1O43189 SNX2P2-201ENST00000424553 323 ntBASIC1.07□□□□□ -2.24
PHF1O43189 AC108059.2-201ENST00000434626 151 ntBASIC1.07□□□□□ -2.24
PHF1O43189 AL138752.1-201ENST00000452964 351 ntBASIC1.07□□□□□ -2.24
PHF1O43189 RPL30P7-201ENST00000479312 323 ntBASIC1.07□□□□□ -2.24
PHF1O43189 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.07□□□□□ -2.24
PHF1O43189 RN7SKP179-201ENST00000516126 217 ntBASIC1.07□□□□□ -2.24
PHF1O43189 RNU6-1299P-201ENST00000516316 100 ntBASIC1.07□□□□□ -2.24
PHF1O43189 SNORA74.3-201ENST00000517108 154 ntBASIC1.07□□□□□ -2.24
PHF1O43189 AL512310.8-201ENST00000550183 120 ntBASIC1.07□□□□□ -2.24
PHF1O43189 MIR3664-201ENST00000579074 99 ntBASIC1.07□□□□□ -2.24
PHF1O43189 GHRLOS.1-201ENST00000610995 70 ntBASIC1.07□□□□□ -2.24
PHF1O43189 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.07□□□□□ -2.24
PHF1O43189 Y_RNA.23-201ENST00000362496 106 ntBASIC1.06□□□□□ -2.24
PHF1O43189 Y_RNA.29-201ENST00000362570 113 ntBASIC1.06□□□□□ -2.24
PHF1O43189 Y_RNA.91-201ENST00000363042 107 ntBASIC1.06□□□□□ -2.24
PHF1O43189 RNU4-70P-201ENST00000384579 139 ntBASIC1.06□□□□□ -2.24
PHF1O43189 MIR516B2-201ENST00000385190 85 ntBASIC1.06□□□□□ -2.24
PHF1O43189 SNORA40.6-201ENST00000391153 128 ntBASIC1.06□□□□□ -2.24
PHF1O43189 AL451046.2-201ENST00000403074 277 ntBASIC1.06□□□□□ -2.24
PHF1O43189 MIR548O-201ENST00000408583 114 ntBASIC1.06□□□□□ -2.24
PHF1O43189 RNU6-322P-201ENST00000516010 103 ntBASIC1.06□□□□□ -2.24
PHF1O43189 RNA5SP436-201ENST00000516020 115 ntBASIC1.06□□□□□ -2.24
PHF1O43189 RNU7-25P-201ENST00000516544 62 ntBASIC1.06□□□□□ -2.24
PHF1O43189 SNORA81.3-201ENST00000517283 198 ntBASIC1.06□□□□□ -2.24
PHF1O43189 AC019176.1-201ENST00000518519 225 ntBASIC1.06□□□□□ -2.24
PHF1O43189 AC090821.2-201ENST00000523552 176 ntBASIC1.06□□□□□ -2.24
PHF1O43189 AC019288.1-201ENST00000557918 224 ntBASIC1.06□□□□□ -2.24
PHF1O43189 RN7SL793P-201ENST00000583259 296 ntBASIC1.06□□□□□ -2.24
PHF1O43189 MIR3660-201ENST00000584845 100 ntBASIC1.06□□□□□ -2.24
PHF1O43189 RNU6-682P-201ENST00000363843 106 ntBASIC1.05□□□□□ -2.24
PHF1O43189 RNU6-978P-201ENST00000364371 103 ntBASIC1.05□□□□□ -2.24
PHF1O43189 Y_RNA.240-201ENST00000364469 95 ntBASIC1.05□□□□□ -2.24
PHF1O43189 SNORD61-201ENST00000384252 73 ntBASIC1.05□□□□□ -2.24
PHF1O43189 RNU6-939P-201ENST00000384634 107 ntBASIC1.05□□□□□ -2.24
PHF1O43189 Y_RNA.547-201ENST00000384654 119 ntBASIC1.05□□□□□ -2.24
PHF1O43189 MIR618-201ENST00000385287 98 ntBASIC1.05□□□□□ -2.24
PHF1O43189 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.05□□□□□ -2.24
PHF1O43189 RNU2-13P-201ENST00000515909 113 ntBASIC1.05□□□□□ -2.24
PHF1O43189 RNU6-1219P-201ENST00000516143 112 ntBASIC1.05□□□□□ -2.24
PHF1O43189 Y_RNA.666-201ENST00000516187 112 ntBASIC1.05□□□□□ -2.24
PHF1O43189 RNU6-922P-201ENST00000516753 99 ntBASIC1.05□□□□□ -2.24
PHF1O43189 RNU6-365P-201ENST00000517113 106 ntBASIC1.05□□□□□ -2.24
PHF1O43189 MIR3937-201ENST00000580135 106 ntBASIC1.05□□□□□ -2.24
PHF1O43189 AL357312.1-201ENST00000603879 298 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 180.6 ms