Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 AL031737.1-201ENST00000450125 223 ntBASIC2.22□□□□□ -2.05
SHOXO15266 RNU6-322P-201ENST00000516010 103 ntBASIC2.22□□□□□ -2.05
SHOXO15266 IGKV3-31-201ENST00000523109 329 ntBASIC2.22□□□□□ -2.05
SHOXO15266 DNAJC19P9-201ENST00000555084 351 ntBASIC2.22□□□□□ -2.05
SHOXO15266 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.22□□□□□ -2.05
SHOXO15266 AP000648.3-201ENST00000623539 4507 ntBASIC2.21□□□□□ -2.05
SHOXO15266 RNU6-1107P-201ENST00000364817 104 ntBASIC2.21□□□□□ -2.06
SHOXO15266 SNORA24-201ENST00000384096 131 ntBASIC2.21□□□□□ -2.06
SHOXO15266 RNA5SP144-201ENST00000410846 116 ntBASIC2.21□□□□□ -2.06
SHOXO15266 RNA5SP508-201ENST00000411327 119 ntBASIC2.21□□□□□ -2.06
SHOXO15266 AL135938.1-201ENST00000443141 297 ntBASIC2.21□□□□□ -2.06
SHOXO15266 RPL23AP6-201ENST00000446637 472 ntBASIC2.21□□□□□ -2.06
SHOXO15266 RNU7-43P-201ENST00000516554 64 ntBASIC2.21□□□□□ -2.06
SHOXO15266 RNU6-958P-201ENST00000516995 106 ntBASIC2.21□□□□□ -2.06
SHOXO15266 SNORA74.3-201ENST00000517108 154 ntBASIC2.21□□□□□ -2.06
SHOXO15266 AC243994.1-201ENST00000618627 109 ntBASIC2.21□□□□□ -2.06
SHOXO15266 AC009831.4-201ENST00000620744 325 ntBASIC2.21□□□□□ -2.06
SHOXO15266 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
SHOXO15266 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
SHOXO15266 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SHOXO15266 Y_RNA.116-201ENST00000363292 103 ntBASIC2.2□□□□□ -2.06
SHOXO15266 SNORA80A-201ENST00000363922 136 ntBASIC2.2□□□□□ -2.06
SHOXO15266 RNU6-1319P-201ENST00000390855 104 ntBASIC2.2□□□□□ -2.06
SHOXO15266 RNU6-747P-201ENST00000390928 104 ntBASIC2.2□□□□□ -2.06
SHOXO15266 RNU6-241P-201ENST00000391148 104 ntBASIC2.2□□□□□ -2.06
SHOXO15266 RNU6-177P-201ENST00000411257 104 ntBASIC2.2□□□□□ -2.06
SHOXO15266 RN7SKP192-201ENST00000411291 327 ntBASIC2.2□□□□□ -2.06
SHOXO15266 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.2□□□□□ -2.06
SHOXO15266 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.2□□□□□ -2.06
SHOXO15266 RNU2-13P-201ENST00000515909 113 ntBASIC2.2□□□□□ -2.06
SHOXO15266 DEFB122-202ENST00000569013 197 ntBASIC2.2□□□□□ -2.06
SHOXO15266 SNORD53-201ENST00000579969 78 ntBASIC2.2□□□□□ -2.06
SHOXO15266 MIR548AR-201ENST00000582191 57 ntBASIC2.2□□□□□ -2.06
SHOXO15266 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SHOXO15266 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
SHOXO15266 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SHOXO15266 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.2□□□□□ -2.06
SHOXO15266 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SHOXO15266 RNU6-457P-201ENST00000363999 107 ntBASIC2.19□□□□□ -2.06
SHOXO15266 RNA5SP126-201ENST00000365092 109 ntBASIC2.19□□□□□ -2.06
SHOXO15266 RNU6-147P-201ENST00000383983 107 ntBASIC2.19□□□□□ -2.06
SHOXO15266 AC004965.1-201ENST00000413033 213 ntBASIC2.19□□□□□ -2.06
SHOXO15266 AC087499.2-201ENST00000432861 149 ntBASIC2.19□□□□□ -2.06
SHOXO15266 RNU7-73P-201ENST00000458743 63 ntBASIC2.19□□□□□ -2.06
SHOXO15266 RNU2-35P-201ENST00000516446 142 ntBASIC2.19□□□□□ -2.06
SHOXO15266 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.19□□□□□ -2.06
SHOXO15266 MIR3613-201ENST00000579844 87 ntBASIC2.19□□□□□ -2.06
SHOXO15266 HSPE1P19-201ENST00000603327 295 ntBASIC2.19□□□□□ -2.06
SHOXO15266 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.19□□□□□ -2.06
SHOXO15266 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.19□□□□□ -2.06
SHOXO15266 AP000553.5-201ENST00000641933 54 ntBASIC2.19□□□□□ -2.06
SHOXO15266 AC092881.1-201ENST00000638218 2733 ntBASIC2.19□□□□□ -2.06
SHOXO15266 RNA5SP432-201ENST00000362480 116 ntBASIC2.18□□□□□ -2.06
SHOXO15266 SNORA63.5-201ENST00000363548 123 ntBASIC2.18□□□□□ -2.06
SHOXO15266 Y_RNA.299-201ENST00000364973 94 ntBASIC2.18□□□□□ -2.06
SHOXO15266 Y_RNA.362-201ENST00000365518 110 ntBASIC2.18□□□□□ -2.06
SHOXO15266 RNU4-52P-201ENST00000384209 138 ntBASIC2.18□□□□□ -2.06
SHOXO15266 SNORA51.10-201ENST00000384418 136 ntBASIC2.18□□□□□ -2.06
SHOXO15266 AL138827.1-201ENST00000402666 306 ntBASIC2.18□□□□□ -2.06
SHOXO15266 AL023284.1-201ENST00000403956 276 ntBASIC2.18□□□□□ -2.06
SHOXO15266 MIR1302-5-201ENST00000408164 150 ntBASIC2.18□□□□□ -2.06
SHOXO15266 MIR514B-201ENST00000516774 80 ntBASIC2.18□□□□□ -2.06
SHOXO15266 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.18□□□□□ -2.06
SHOXO15266 MIR4635-201ENST00000583759 79 ntBASIC2.18□□□□□ -2.06
SHOXO15266 MIR4791-201ENST00000607666 84 ntBASIC2.18□□□□□ -2.06
SHOXO15266 uc_338.28-201ENST00000612082 187 ntBASIC2.18□□□□□ -2.06
SHOXO15266 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.18□□□□□ -2.06
SHOXO15266 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SHOXO15266 RNU6-661P-201ENST00000362409 107 ntBASIC2.17□□□□□ -2.06
SHOXO15266 RNA5SP276-201ENST00000362580 94 ntBASIC2.17□□□□□ -2.06
SHOXO15266 RNU6-32P-201ENST00000383948 107 ntBASIC2.17□□□□□ -2.06
SHOXO15266 RNU6-13P-201ENST00000384248 107 ntBASIC2.17□□□□□ -2.06
SHOXO15266 RNU6-12P-201ENST00000384604 107 ntBASIC2.17□□□□□ -2.06
SHOXO15266 RNU6-41P-201ENST00000384741 107 ntBASIC2.17□□□□□ -2.06
SHOXO15266 MIR548D2-201ENST00000384955 97 ntBASIC2.17□□□□□ -2.06
SHOXO15266 JTBP1-201ENST00000441314 247 ntBASIC2.17□□□□□ -2.06
SHOXO15266 RPS27P21-201ENST00000486977 252 ntBASIC2.17□□□□□ -2.06
SHOXO15266 MIR4287-201ENST00000579398 78 ntBASIC2.17□□□□□ -2.06
SHOXO15266 MIR5092-201ENST00000583139 88 ntBASIC2.17□□□□□ -2.06
SHOXO15266 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
SHOXO15266 MIR449A-201ENST00000362113 91 ntBASIC2.16□□□□□ -2.06
SHOXO15266 Y_RNA.309-201ENST00000365046 111 ntBASIC2.16□□□□□ -2.06
SHOXO15266 RNU6-203P-201ENST00000384038 104 ntBASIC2.16□□□□□ -2.06
SHOXO15266 Y_RNA.549-201ENST00000384657 102 ntBASIC2.16□□□□□ -2.06
SHOXO15266 MIR194-1-201ENST00000384892 85 ntBASIC2.16□□□□□ -2.06
SHOXO15266 SNORD28B-201ENST00000390993 75 ntBASIC2.16□□□□□ -2.06
SHOXO15266 RNU7-113P-201ENST00000459273 62 ntBASIC2.16□□□□□ -2.06
SHOXO15266 snoU13.16-201ENST00000459350 104 ntBASIC2.16□□□□□ -2.06
SHOXO15266 RPL39P34-201ENST00000477141 156 ntBASIC2.16□□□□□ -2.06
SHOXO15266 AC004812.1-201ENST00000540773 146 ntBASIC2.16□□□□□ -2.06
SHOXO15266 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.16□□□□□ -2.06
SHOXO15266 MIR4448-201ENST00000584360 86 ntBASIC2.16□□□□□ -2.06
SHOXO15266 AL035470.1-201ENST00000622571 220 ntBASIC2.16□□□□□ -2.06
SHOXO15266 AC106754.2-201ENST00000623006 233 ntBASIC2.16□□□□□ -2.06
SHOXO15266 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
SHOXO15266 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
SHOXO15266 Y_RNA.430-201ENST00000384081 110 ntBASIC2.15□□□□□ -2.07
SHOXO15266 RNU6-1113P-201ENST00000384348 107 ntBASIC2.15□□□□□ -2.07
SHOXO15266 SNORA44-201ENST00000384584 132 ntBASIC2.15□□□□□ -2.07
SHOXO15266 Y_RNA.531-201ENST00000384589 121 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms