Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.93□□□□□ -2.26
E2F3O00716 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.93□□□□□ -2.26
E2F3O00716 MTND3P2-201ENST00000438452 342 ntBASIC0.93□□□□□ -2.26
E2F3O00716 SNORD2.1-201ENST00000458762 69 ntBASIC0.93□□□□□ -2.26
E2F3O00716 SNORD79.1-201ENST00000516069 84 ntBASIC0.93□□□□□ -2.26
E2F3O00716 Y_RNA.666-201ENST00000516187 112 ntBASIC0.93□□□□□ -2.26
E2F3O00716 ACA64.5-201ENST00000516207 127 ntBASIC0.93□□□□□ -2.26
E2F3O00716 RNU6-830P-201ENST00000516353 107 ntBASIC0.93□□□□□ -2.26
E2F3O00716 RNU7-181P-201ENST00000517234 74 ntBASIC0.93□□□□□ -2.26
E2F3O00716 MIR5000-201ENST00000577717 103 ntBASIC0.93□□□□□ -2.26
E2F3O00716 MIR4662B-201ENST00000579498 81 ntBASIC0.93□□□□□ -2.26
E2F3O00716 U4.1-201ENST00000620349 87 ntBASIC0.93□□□□□ -2.26
E2F3O00716 RNA5SP325-201ENST00000363756 130 ntBASIC0.92□□□□□ -2.26
E2F3O00716 SNORD27-201ENST00000363981 72 ntBASIC0.92□□□□□ -2.26
E2F3O00716 RNU6-1138P-201ENST00000365359 106 ntBASIC0.92□□□□□ -2.26
E2F3O00716 Y_RNA.363-201ENST00000365529 113 ntBASIC0.92□□□□□ -2.26
E2F3O00716 RNU6-196P-201ENST00000384315 107 ntBASIC0.92□□□□□ -2.26
E2F3O00716 Y_RNA.477-201ENST00000384352 108 ntBASIC0.92□□□□□ -2.26
E2F3O00716 Y_RNA.486-201ENST00000384398 107 ntBASIC0.92□□□□□ -2.26
E2F3O00716 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.92□□□□□ -2.26
E2F3O00716 RNU7-41P-201ENST00000515917 61 ntBASIC0.92□□□□□ -2.26
E2F3O00716 SNORD77.4-201ENST00000516158 81 ntBASIC0.92□□□□□ -2.26
E2F3O00716 AC100767.1-201ENST00000528178 123 ntBASIC0.92□□□□□ -2.26
E2F3O00716 MIR4643-201ENST00000577473 78 ntBASIC0.92□□□□□ -2.26
E2F3O00716 MIR4282-201ENST00000583613 67 ntBASIC0.92□□□□□ -2.26
E2F3O00716 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.92□□□□□ -2.26
E2F3O00716 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
E2F3O00716 Y_RNA.36-201ENST00000362602 112 ntBASIC0.91□□□□□ -2.26
E2F3O00716 Y_RNA.65-201ENST00000362846 100 ntBASIC0.91□□□□□ -2.26
E2F3O00716 SNORA25.3-201ENST00000363205 127 ntBASIC0.91□□□□□ -2.26
E2F3O00716 SNORD114-24-201ENST00000365029 72 ntBASIC0.91□□□□□ -2.26
E2F3O00716 RNU1-36P-201ENST00000365130 165 ntBASIC0.91□□□□□ -2.26
E2F3O00716 SNORA1.2-201ENST00000365189 134 ntBASIC0.91□□□□□ -2.26
E2F3O00716 Y_RNA.370-201ENST00000365589 108 ntBASIC0.91□□□□□ -2.26
E2F3O00716 Y_RNA.518-201ENST00000384552 113 ntBASIC0.91□□□□□ -2.26
E2F3O00716 MT-TT-201ENST00000387460 66 ntBASIC0.91□□□□□ -2.26
E2F3O00716 SNORD28B-201ENST00000390993 75 ntBASIC0.91□□□□□ -2.26
E2F3O00716 MIR548O-201ENST00000408583 114 ntBASIC0.91□□□□□ -2.26
E2F3O00716 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.91□□□□□ -2.26
E2F3O00716 RNU7-25P-201ENST00000516544 62 ntBASIC0.91□□□□□ -2.26
E2F3O00716 RNU6-365P-201ENST00000517113 106 ntBASIC0.91□□□□□ -2.26
E2F3O00716 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.91□□□□□ -2.26
E2F3O00716 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.9□□□□□ -2.26
E2F3O00716 Y_RNA.199-201ENST00000364014 102 ntBASIC0.9□□□□□ -2.27
E2F3O00716 Y_RNA.262-201ENST00000364641 102 ntBASIC0.9□□□□□ -2.27
E2F3O00716 Y_RNA.292-201ENST00000364904 97 ntBASIC0.9□□□□□ -2.27
E2F3O00716 Y_RNA.304-201ENST00000365011 112 ntBASIC0.9□□□□□ -2.27
E2F3O00716 SNORA80D-201ENST00000384488 135 ntBASIC0.9□□□□□ -2.27
E2F3O00716 Y_RNA.547-201ENST00000384654 119 ntBASIC0.9□□□□□ -2.27
E2F3O00716 MIR570-201ENST00000384917 97 ntBASIC0.9□□□□□ -2.27
E2F3O00716 MIR532-201ENST00000385025 91 ntBASIC0.9□□□□□ -2.27
E2F3O00716 Y_RNA.622-201ENST00000411091 108 ntBASIC0.9□□□□□ -2.27
E2F3O00716 AC107297.1-201ENST00000459991 176 ntBASIC0.9□□□□□ -2.27
E2F3O00716 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.9□□□□□ -2.27
E2F3O00716 PDCD5P2-201ENST00000507570 312 ntBASIC0.9□□□□□ -2.27
E2F3O00716 RNU6-693P-201ENST00000516134 107 ntBASIC0.9□□□□□ -2.27
E2F3O00716 RNU6-1299P-201ENST00000516316 100 ntBASIC0.9□□□□□ -2.27
E2F3O00716 RNU6-126P-201ENST00000516685 103 ntBASIC0.9□□□□□ -2.27
E2F3O00716 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.9□□□□□ -2.27
E2F3O00716 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.9□□□□□ -2.27
E2F3O00716 MIR3973-201ENST00000579824 107 ntBASIC0.9□□□□□ -2.27
E2F3O00716 MIR4503-201ENST00000582187 83 ntBASIC0.9□□□□□ -2.27
E2F3O00716 PRELID3BP2-201ENST00000605362 201 ntBASIC0.9□□□□□ -2.27
E2F3O00716 AC062037.2-201ENST00000610137 73 ntBASIC0.9□□□□□ -2.27
E2F3O00716 AL391903.3-201ENST00000612158 163 ntBASIC0.9□□□□□ -2.27
E2F3O00716 AL442067.1-201ENST00000613261 223 ntBASIC0.9□□□□□ -2.27
E2F3O00716 AC008133.2-201ENST00000624540 351 ntBASIC0.9□□□□□ -2.27
E2F3O00716 AC008163.1-202ENST00000636004 2889 ntBASIC0.9□□□□□ -2.27
E2F3O00716 MIR103A2-201ENST00000362154 78 ntBASIC0.89□□□□□ -2.27
E2F3O00716 Y_RNA.76-201ENST00000362931 109 ntBASIC0.89□□□□□ -2.27
E2F3O00716 RNA5SP264-201ENST00000363115 107 ntBASIC0.89□□□□□ -2.27
E2F3O00716 RNU1-133P-201ENST00000364867 167 ntBASIC0.89□□□□□ -2.27
E2F3O00716 RNU6-702P-201ENST00000364982 107 ntBASIC0.89□□□□□ -2.27
E2F3O00716 Y_RNA.350-201ENST00000365409 98 ntBASIC0.89□□□□□ -2.27
E2F3O00716 MIR200A-201ENST00000384875 90 ntBASIC0.89□□□□□ -2.27
E2F3O00716 AL606845.1-201ENST00000404881 255 ntBASIC0.89□□□□□ -2.27
E2F3O00716 RNU2-70P-201ENST00000410718 179 ntBASIC0.89□□□□□ -2.27
E2F3O00716 RNU6-453P-201ENST00000516819 85 ntBASIC0.89□□□□□ -2.27
E2F3O00716 CYP3A137P-201ENST00000562436 69 ntBASIC0.89□□□□□ -2.27
E2F3O00716 MIR4251-201ENST00000635819 61 ntBASIC0.89□□□□□ -2.27
E2F3O00716 RNA5SP48-201ENST00000363969 126 ntBASIC0.88□□□□□ -2.27
E2F3O00716 snoU2_19.4-201ENST00000364329 80 ntBASIC0.88□□□□□ -2.27
E2F3O00716 Y_RNA.330-201ENST00000365230 109 ntBASIC0.88□□□□□ -2.27
E2F3O00716 RNY3P5-201ENST00000384127 102 ntBASIC0.88□□□□□ -2.27
E2F3O00716 RNU6-574P-201ENST00000384265 107 ntBASIC0.88□□□□□ -2.27
E2F3O00716 Y_RNA.562-201ENST00000384695 113 ntBASIC0.88□□□□□ -2.27
E2F3O00716 MIR616-201ENST00000385293 97 ntBASIC0.88□□□□□ -2.27
E2F3O00716 RNU6-1228P-201ENST00000391014 107 ntBASIC0.88□□□□□ -2.27
E2F3O00716 SNORA26-201ENST00000391286 122 ntBASIC0.88□□□□□ -2.27
E2F3O00716 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.88□□□□□ -2.27
E2F3O00716 snoU13.25-201ENST00000458945 104 ntBASIC0.88□□□□□ -2.27
E2F3O00716 SCARNA8-201ENST00000515924 131 ntBASIC0.88□□□□□ -2.27
E2F3O00716 RNU4-57P-201ENST00000515980 135 ntBASIC0.88□□□□□ -2.27
E2F3O00716 Y_RNA.668-201ENST00000516233 93 ntBASIC0.88□□□□□ -2.27
E2F3O00716 RNU6-504P-201ENST00000516568 104 ntBASIC0.88□□□□□ -2.27
E2F3O00716 MIR3128-201ENST00000581957 66 ntBASIC0.88□□□□□ -2.27
E2F3O00716 SNORD115-28-201ENST00000363931 81 ntBASIC0.87□□□□□ -2.27
E2F3O00716 Y_RNA.308-201ENST00000365043 101 ntBASIC0.87□□□□□ -2.27
E2F3O00716 RNU4-17P-201ENST00000365598 141 ntBASIC0.87□□□□□ -2.27
E2F3O00716 Y_RNA.393-201ENST00000383936 102 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms