Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC006441.5-201ENST00000612680 209 ntBASIC1.03□□□□□ -2.24
O00370 AL442067.1-201ENST00000613261 223 ntBASIC1.03□□□□□ -2.24
O00370 snoU2_19.4-201ENST00000364329 80 ntBASIC1.02□□□□□ -2.25
O00370 Y_RNA.241-201ENST00000364470 117 ntBASIC1.02□□□□□ -2.25
O00370 Y_RNA.262-201ENST00000364641 102 ntBASIC1.02□□□□□ -2.25
O00370 Y_RNA.292-201ENST00000364904 97 ntBASIC1.02□□□□□ -2.25
O00370 Y_RNA.308-201ENST00000365043 101 ntBASIC1.02□□□□□ -2.25
O00370 Y_RNA.370-201ENST00000365589 108 ntBASIC1.02□□□□□ -2.25
O00370 SNORA51.10-201ENST00000384418 136 ntBASIC1.02□□□□□ -2.25
O00370 Y_RNA.547-201ENST00000384654 119 ntBASIC1.02□□□□□ -2.25
O00370 RNU6-493P-201ENST00000391321 108 ntBASIC1.02□□□□□ -2.25
O00370 AL606845.1-201ENST00000404881 255 ntBASIC1.02□□□□□ -2.25
O00370 RNU6-1054P-201ENST00000411293 104 ntBASIC1.02□□□□□ -2.25
O00370 AC063976.4-201ENST00000421971 163 ntBASIC1.02□□□□□ -2.25
O00370 RNU6-693P-201ENST00000516134 107 ntBASIC1.02□□□□□ -2.25
O00370 RNY3P16-201ENST00000516338 101 ntBASIC1.02□□□□□ -2.25
O00370 U4.1-201ENST00000620349 87 ntBASIC1.02□□□□□ -2.25
O00370 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.02□□□□□ -2.25
O00370 RNU6-923P-201ENST00000364753 107 ntBASIC1.01□□□□□ -2.25
O00370 RNU6-702P-201ENST00000364982 107 ntBASIC1.01□□□□□ -2.25
O00370 Y_RNA.304-201ENST00000365011 112 ntBASIC1.01□□□□□ -2.25
O00370 RNU6-1138P-201ENST00000365359 106 ntBASIC1.01□□□□□ -2.25
O00370 Y_RNA.350-201ENST00000365409 98 ntBASIC1.01□□□□□ -2.25
O00370 RNU6-1228P-201ENST00000391014 107 ntBASIC1.01□□□□□ -2.25
O00370 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.01□□□□□ -2.25
O00370 RNU6-1299P-201ENST00000516316 100 ntBASIC1.01□□□□□ -2.25
O00370 RNU6-365P-201ENST00000517113 106 ntBASIC1.01□□□□□ -2.25
O00370 AC109810.1-201ENST00000534066 224 ntBASIC1.01□□□□□ -2.25
O00370 MIR4662B-201ENST00000579498 81 ntBASIC1.01□□□□□ -2.25
O00370 MIR3128-201ENST00000581957 66 ntBASIC1.01□□□□□ -2.25
O00370 AC062037.2-201ENST00000610137 73 ntBASIC1.01□□□□□ -2.25
O00370 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
O00370 Y_RNA.60-201ENST00000362831 98 ntBASIC1□□□□□ -2.25
O00370 Y_RNA.91-201ENST00000363042 107 ntBASIC1□□□□□ -2.25
O00370 RNA5SP264-201ENST00000363115 107 ntBASIC1□□□□□ -2.25
O00370 SNORA1.2-201ENST00000365189 134 ntBASIC1□□□□□ -2.25
O00370 Y_RNA.432-201ENST00000384087 111 ntBASIC1□□□□□ -2.25
O00370 SNORA80D-201ENST00000384488 135 ntBASIC1□□□□□ -2.25
O00370 RNU6-1067P-201ENST00000384752 107 ntBASIC1□□□□□ -2.25
O00370 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1□□□□□ -2.25
O00370 RPS23P4-201ENST00000487908 423 ntBASIC1□□□□□ -2.25
O00370 SCARNA8-201ENST00000515924 131 ntBASIC1□□□□□ -2.25
O00370 RNU4-57P-201ENST00000515980 135 ntBASIC1□□□□□ -2.25
O00370 SNORD79.1-201ENST00000516069 84 ntBASIC1□□□□□ -2.25
O00370 AC023827.1-201ENST00000569247 97 ntBASIC1□□□□□ -2.25
O00370 MIR4503-201ENST00000582187 83 ntBASIC1□□□□□ -2.25
O00370 Y_RNA.518-201ENST00000384552 113 ntBASIC0.99□□□□□ -2.25
O00370 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.99□□□□□ -2.25
O00370 Y_RNA.668-201ENST00000516233 93 ntBASIC0.99□□□□□ -2.25
O00370 RNU6-830P-201ENST00000516353 107 ntBASIC0.99□□□□□ -2.25
O00370 MIR4661-201ENST00000582720 75 ntBASIC0.99□□□□□ -2.25
O00370 MIR3149-201ENST00000584629 83 ntBASIC0.99□□□□□ -2.25
O00370 AL162730.1-201ENST00000605734 292 ntBASIC0.99□□□□□ -2.25
O00370 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.99□□□□□ -2.25
O00370 SNORD45.3-201ENST00000363836 72 ntBASIC0.98□□□□□ -2.25
O00370 SNORD115-28-201ENST00000363931 81 ntBASIC0.98□□□□□ -2.25
O00370 Y_RNA.307-201ENST00000365022 117 ntBASIC0.98□□□□□ -2.25
O00370 SNORD61-201ENST00000384252 73 ntBASIC0.98□□□□□ -2.25
O00370 MIR532-201ENST00000385025 91 ntBASIC0.98□□□□□ -2.25
O00370 MIR616-201ENST00000385293 97 ntBASIC0.98□□□□□ -2.25
O00370 RNU6-381P-201ENST00000391259 108 ntBASIC0.98□□□□□ -2.25
O00370 RNU7-67P-201ENST00000459003 62 ntBASIC0.98□□□□□ -2.25
O00370 AC107297.1-201ENST00000459991 176 ntBASIC0.98□□□□□ -2.25
O00370 MIR5688-201ENST00000580619 83 ntBASIC0.98□□□□□ -2.25
O00370 MIR4282-201ENST00000583613 67 ntBASIC0.98□□□□□ -2.25
O00370 MIR4791-201ENST00000607666 84 ntBASIC0.98□□□□□ -2.25
O00370 AL391516.1-201ENST00000554380 2449 ntBASIC0.97□□□□□ -2.25
O00370 MIR342-201ENST00000362212 99 ntBASIC0.97□□□□□ -2.25
O00370 RNU6-653P-201ENST00000363074 106 ntBASIC0.97□□□□□ -2.25
O00370 Y_RNA.144-201ENST00000363521 113 ntBASIC0.97□□□□□ -2.25
O00370 Y_RNA.466-201ENST00000384294 113 ntBASIC0.97□□□□□ -2.25
O00370 Y_RNA.562-201ENST00000384695 113 ntBASIC0.97□□□□□ -2.25
O00370 MIR518F-201ENST00000384973 87 ntBASIC0.97□□□□□ -2.25
O00370 MIR1185-1-201ENST00000408598 86 ntBASIC0.97□□□□□ -2.25
O00370 RNA5SP95-201ENST00000410319 137 ntBASIC0.97□□□□□ -2.25
O00370 AC002429.1-201ENST00000437672 148 ntBASIC0.97□□□□□ -2.25
O00370 SNORD124-201ENST00000459577 104 ntBASIC0.97□□□□□ -2.25
O00370 Y_RNA.680-201ENST00000516441 93 ntBASIC0.97□□□□□ -2.25
O00370 AC007751.1-201ENST00000529260 376 ntBASIC0.97□□□□□ -2.25
O00370 RNU2-4P-201ENST00000606190 192 ntBASIC0.97□□□□□ -2.25
O00370 AC243994.1-201ENST00000618627 109 ntBASIC0.97□□□□□ -2.25
O00370 7SK.10-201ENST00000621414 298 ntBASIC0.97□□□□□ -2.25
O00370 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.97□□□□□ -2.25
O00370 RNY1-201ENST00000364228 113 ntBASIC0.96□□□□□ -2.26
O00370 SNORA20.1-201ENST00000364790 130 ntBASIC0.96□□□□□ -2.26
O00370 SNORA26-201ENST00000391286 122 ntBASIC0.96□□□□□ -2.26
O00370 MIR942-201ENST00000401111 86 ntBASIC0.96□□□□□ -2.26
O00370 SNORA79-201ENST00000408376 140 ntBASIC0.96□□□□□ -2.26
O00370 RNU6-847P-201ENST00000411115 108 ntBASIC0.96□□□□□ -2.26
O00370 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.96□□□□□ -2.26
O00370 AL121914.1-201ENST00000450188 156 ntBASIC0.96□□□□□ -2.26
O00370 RNU7-90P-201ENST00000459216 62 ntBASIC0.96□□□□□ -2.26
O00370 RNU7-21P-201ENST00000459430 62 ntBASIC0.96□□□□□ -2.26
O00370 RPS26P48-201ENST00000491713 339 ntBASIC0.96□□□□□ -2.26
O00370 MTND1P19-201ENST00000511780 315 ntBASIC0.96□□□□□ -2.26
O00370 ACA64.5-201ENST00000516207 127 ntBASIC0.96□□□□□ -2.26
O00370 RNU6-561P-201ENST00000516222 102 ntBASIC0.96□□□□□ -2.26
O00370 RNU6-504P-201ENST00000516568 104 ntBASIC0.96□□□□□ -2.26
O00370 RNU6-113P-201ENST00000516653 101 ntBASIC0.96□□□□□ -2.26
O00370 SNORD36C-201ENST00000516733 66 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 258 ms