Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 MIR3179-4-201ENST00000617599 84 ntBASIC-1.28□□□□□ -2.61
TRAV1-2A0A0B4J238 AL354950.2-201ENST00000617939 290 ntBASIC-1.28□□□□□ -2.61
TRAV1-2A0A0B4J238 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.29□□□□□ -2.62
TRAV1-2A0A0B4J238 RNU6-879P-201ENST00000364328 108 ntBASIC-1.29□□□□□ -2.62
TRAV1-2A0A0B4J238 RNU1-141P-201ENST00000364623 158 ntBASIC-1.29□□□□□ -2.62
TRAV1-2A0A0B4J238 RNU6-128P-201ENST00000383976 107 ntBASIC-1.29□□□□□ -2.62
TRAV1-2A0A0B4J238 RNU6-297P-201ENST00000384636 107 ntBASIC-1.29□□□□□ -2.62
TRAV1-2A0A0B4J238 Y_RNA.557-201ENST00000384680 107 ntBASIC-1.29□□□□□ -2.62
TRAV1-2A0A0B4J238 MIR518B-201ENST00000385127 83 ntBASIC-1.29□□□□□ -2.62
TRAV1-2A0A0B4J238 MIR1278-201ENST00000408753 81 ntBASIC-1.29□□□□□ -2.62
TRAV1-2A0A0B4J238 RNU6-1203P-201ENST00000410703 110 ntBASIC-1.29□□□□□ -2.62
TRAV1-2A0A0B4J238 FCF1P4-201ENST00000448326 183 ntBASIC-1.29□□□□□ -2.62
TRAV1-2A0A0B4J238 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-1.29□□□□□ -2.62
TRAV1-2A0A0B4J238 RNU7-96P-201ENST00000459535 64 ntBASIC-1.29□□□□□ -2.62
TRAV1-2A0A0B4J238 RNU6-1208P-201ENST00000459588 107 ntBASIC-1.29□□□□□ -2.62
TRAV1-2A0A0B4J238 MTND3P7-201ENST00000474435 343 ntBASIC-1.29□□□□□ -2.62
TRAV1-2A0A0B4J238 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-1.29□□□□□ -2.62
TRAV1-2A0A0B4J238 RNU6-998P-201ENST00000515894 101 ntBASIC-1.29□□□□□ -2.62
TRAV1-2A0A0B4J238 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.29□□□□□ -2.62
TRAV1-2A0A0B4J238 MIR3165-201ENST00000579874 75 ntBASIC-1.29□□□□□ -2.62
TRAV1-2A0A0B4J238 MIR4473-201ENST00000583731 91 ntBASIC-1.29□□□□□ -2.62
TRAV1-2A0A0B4J238 Y_RNA.37-201ENST00000362606 108 ntBASIC-1.3□□□□□ -2.62
TRAV1-2A0A0B4J238 Y_RNA.38-201ENST00000362617 102 ntBASIC-1.3□□□□□ -2.62
TRAV1-2A0A0B4J238 Y_RNA.310-201ENST00000365063 113 ntBASIC-1.3□□□□□ -2.62
TRAV1-2A0A0B4J238 Y_RNA.364-201ENST00000365532 101 ntBASIC-1.3□□□□□ -2.62
TRAV1-2A0A0B4J238 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-1.3□□□□□ -2.62
TRAV1-2A0A0B4J238 UBE2V1P7-201ENST00000446395 340 ntBASIC-1.3□□□□□ -2.62
TRAV1-2A0A0B4J238 SNORA18.6-201ENST00000516792 115 ntBASIC-1.3□□□□□ -2.62
TRAV1-2A0A0B4J238 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.3□□□□□ -2.62
TRAV1-2A0A0B4J238 AC022441.3-201ENST00000605737 136 ntBASIC-1.3□□□□□ -2.62
TRAV1-2A0A0B4J238 AL021368.1-201ENST00000607490 540 ntBASIC-1.3□□□□□ -2.62
TRAV1-2A0A0B4J238 Y_RNA.430-201ENST00000384081 110 ntBASIC-1.31□□□□□ -2.62
TRAV1-2A0A0B4J238 RNU6-906P-201ENST00000384700 70 ntBASIC-1.31□□□□□ -2.62
TRAV1-2A0A0B4J238 RNU6-1158P-201ENST00000391167 107 ntBASIC-1.31□□□□□ -2.62
TRAV1-2A0A0B4J238 MIR190B-201ENST00000401119 79 ntBASIC-1.31□□□□□ -2.62
TRAV1-2A0A0B4J238 RNU6-248P-201ENST00000410720 107 ntBASIC-1.31□□□□□ -2.62
TRAV1-2A0A0B4J238 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-1.31□□□□□ -2.62
TRAV1-2A0A0B4J238 RNU6-408P-201ENST00000515910 100 ntBASIC-1.31□□□□□ -2.62
TRAV1-2A0A0B4J238 RNU7-115P-201ENST00000516433 55 ntBASIC-1.31□□□□□ -2.62
TRAV1-2A0A0B4J238 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-1.31□□□□□ -2.62
TRAV1-2A0A0B4J238 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-1.31□□□□□ -2.62
TRAV1-2A0A0B4J238 AC007494.3-201ENST00000624660 743 ntBASIC-1.31□□□□□ -2.62
TRAV1-2A0A0B4J238 RNU6-254P-201ENST00000363377 107 ntBASIC-1.32□□□□□ -2.62
TRAV1-2A0A0B4J238 RNY1P13-201ENST00000365030 105 ntBASIC-1.32□□□□□ -2.62
TRAV1-2A0A0B4J238 RNU4-66P-201ENST00000365199 138 ntBASIC-1.32□□□□□ -2.62
TRAV1-2A0A0B4J238 RNU6-596P-201ENST00000365395 98 ntBASIC-1.32□□□□□ -2.62
TRAV1-2A0A0B4J238 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.32□□□□□ -2.62
TRAV1-2A0A0B4J238 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-1.32□□□□□ -2.62
TRAV1-2A0A0B4J238 RNU7-55P-201ENST00000459426 62 ntBASIC-1.32□□□□□ -2.62
TRAV1-2A0A0B4J238 SNORD42A-201ENST00000459584 64 ntBASIC-1.32□□□□□ -2.62
TRAV1-2A0A0B4J238 SNORD36C-201ENST00000516733 66 ntBASIC-1.32□□□□□ -2.62
TRAV1-2A0A0B4J238 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-1.32□□□□□ -2.62
TRAV1-2A0A0B4J238 MIR3920-201ENST00000581751 86 ntBASIC-1.32□□□□□ -2.62
TRAV1-2A0A0B4J238 AC019193.3-201ENST00000609144 554 ntBASIC-1.32□□□□□ -2.62
TRAV1-2A0A0B4J238 AC091931.1-201ENST00000623488 728 ntBASIC-1.32□□□□□ -2.62
TRAV1-2A0A0B4J238 RNU6-961P-201ENST00000363893 105 ntBASIC-1.33□□□□□ -2.62
TRAV1-2A0A0B4J238 Y_RNA.221-201ENST00000364248 96 ntBASIC-1.33□□□□□ -2.62
TRAV1-2A0A0B4J238 RNU4-20P-201ENST00000365601 151 ntBASIC-1.33□□□□□ -2.62
TRAV1-2A0A0B4J238 SNORD24-201ENST00000383884 75 ntBASIC-1.33□□□□□ -2.62
TRAV1-2A0A0B4J238 MIR626-201ENST00000385032 94 ntBASIC-1.33□□□□□ -2.62
TRAV1-2A0A0B4J238 Y_RNA.587-201ENST00000391210 103 ntBASIC-1.33□□□□□ -2.62
TRAV1-2A0A0B4J238 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.33□□□□□ -2.62
TRAV1-2A0A0B4J238 MIR4306-201ENST00000583390 91 ntBASIC-1.33□□□□□ -2.62
TRAV1-2A0A0B4J238 AC087752.4-201ENST00000605911 462 ntBASIC-1.33□□□□□ -2.62
TRAV1-2A0A0B4J238 AC069503.3-201ENST00000618674 145 ntBASIC-1.33□□□□□ -2.62
TRAV1-2A0A0B4J238 AC022140.2-201ENST00000623500 188 ntBASIC-1.33□□□□□ -2.62
TRAV1-2A0A0B4J238 MIR4320-201ENST00000636981 65 ntBASIC-1.33□□□□□ -2.62
TRAV1-2A0A0B4J238 Y_RNA.7-201ENST00000362352 102 ntBASIC-1.34□□□□□ -2.62
TRAV1-2A0A0B4J238 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.34□□□□□ -2.62
TRAV1-2A0A0B4J238 SNORA72.3-201ENST00000365074 132 ntBASIC-1.34□□□□□ -2.62
TRAV1-2A0A0B4J238 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.34□□□□□ -2.62
TRAV1-2A0A0B4J238 RNU6-449P-201ENST00000383914 107 ntBASIC-1.34□□□□□ -2.62
TRAV1-2A0A0B4J238 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.34□□□□□ -2.62
TRAV1-2A0A0B4J238 Y_RNA.458-201ENST00000384240 102 ntBASIC-1.34□□□□□ -2.62
TRAV1-2A0A0B4J238 SNORD12B-201ENST00000410433 91 ntBASIC-1.34□□□□□ -2.62
TRAV1-2A0A0B4J238 RNA5SP261-201ENST00000410536 106 ntBASIC-1.34□□□□□ -2.62
TRAV1-2A0A0B4J238 RNU7-45P-201ENST00000459460 63 ntBASIC-1.34□□□□□ -2.62
TRAV1-2A0A0B4J238 snoU109.3-201ENST00000459477 145 ntBASIC-1.34□□□□□ -2.62
TRAV1-2A0A0B4J238 RNA5SP461-201ENST00000516451 104 ntBASIC-1.34□□□□□ -2.62
TRAV1-2A0A0B4J238 AP000676.1-201ENST00000533307 52 ntBASIC-1.34□□□□□ -2.62
TRAV1-2A0A0B4J238 ELOCP32-201ENST00000548625 324 ntBASIC-1.34□□□□□ -2.62
TRAV1-2A0A0B4J238 MIR4273-201ENST00000582824 84 ntBASIC-1.34□□□□□ -2.62
TRAV1-2A0A0B4J238 MIR548AE1-201ENST00000583292 70 ntBASIC-1.34□□□□□ -2.62
TRAV1-2A0A0B4J238 AC124303.1-201ENST00000605703 360 ntBASIC-1.34□□□□□ -2.62
TRAV1-2A0A0B4J238 Y_RNA.341-201ENST00000365341 102 ntBASIC-1.35□□□□□ -2.63
TRAV1-2A0A0B4J238 Y_RNA.436-201ENST00000384097 102 ntBASIC-1.35□□□□□ -2.63
TRAV1-2A0A0B4J238 Y_RNA.456-201ENST00000384232 111 ntBASIC-1.35□□□□□ -2.63
TRAV1-2A0A0B4J238 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.35□□□□□ -2.63
TRAV1-2A0A0B4J238 RNU6-710P-201ENST00000410424 105 ntBASIC-1.35□□□□□ -2.63
TRAV1-2A0A0B4J238 SCARNA18B-201ENST00000458806 135 ntBASIC-1.35□□□□□ -2.63
TRAV1-2A0A0B4J238 RNU7-74P-201ENST00000459104 62 ntBASIC-1.35□□□□□ -2.63
TRAV1-2A0A0B4J238 RNA5SP401-201ENST00000515920 127 ntBASIC-1.35□□□□□ -2.63
TRAV1-2A0A0B4J238 SNORD22.1-201ENST00000516331 125 ntBASIC-1.35□□□□□ -2.63
TRAV1-2A0A0B4J238 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC-1.35□□□□□ -2.63
TRAV1-2A0A0B4J238 MIR5701-3-201ENST00000578890 82 ntBASIC-1.35□□□□□ -2.63
TRAV1-2A0A0B4J238 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-1.35□□□□□ -2.63
TRAV1-2A0A0B4J238 MIR5701-1-201ENST00000585138 82 ntBASIC-1.35□□□□□ -2.63
TRAV1-2A0A0B4J238 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.35□□□□□ -2.63
TRAV1-2A0A0B4J238 MIR5701-2-201ENST00000615634 82 ntBASIC-1.35□□□□□ -2.63
TRAV1-2A0A0B4J238 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.36□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 9.5 ms