Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 SNORD11-201ENST00000459124 84 ntBASIC-1.63□□□□□ -2.67
TRAV13-2A0A0B4J235 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-1.63□□□□□ -2.67
TRAV13-2A0A0B4J235 RNU6-998P-201ENST00000515894 101 ntBASIC-1.63□□□□□ -2.67
TRAV13-2A0A0B4J235 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.63□□□□□ -2.67
TRAV13-2A0A0B4J235 AC055872.1-201ENST00000570978 278 ntBASIC-1.63□□□□□ -2.67
TRAV13-2A0A0B4J235 AC018638.8-201ENST00000588755 281 ntBASIC-1.63□□□□□ -2.67
TRAV13-2A0A0B4J235 Y_RNA.37-201ENST00000362606 108 ntBASIC-1.64□□□□□ -2.67
TRAV13-2A0A0B4J235 Y_RNA.167-201ENST00000363735 109 ntBASIC-1.64□□□□□ -2.67
TRAV13-2A0A0B4J235 RNU6-128P-201ENST00000383976 107 ntBASIC-1.64□□□□□ -2.67
TRAV13-2A0A0B4J235 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-1.64□□□□□ -2.67
TRAV13-2A0A0B4J235 AL033528.1-201ENST00000453780 140 ntBASIC-1.64□□□□□ -2.67
TRAV13-2A0A0B4J235 MTND1P11-201ENST00000456661 876 ntBASIC-1.64□□□□□ -2.67
TRAV13-2A0A0B4J235 AC022137.1-201ENST00000483735 151 ntBASIC-1.64□□□□□ -2.67
TRAV13-2A0A0B4J235 RNU6-436P-201ENST00000516171 114 ntBASIC-1.64□□□□□ -2.67
TRAV13-2A0A0B4J235 SNORD22.1-201ENST00000516331 125 ntBASIC-1.64□□□□□ -2.67
TRAV13-2A0A0B4J235 MIR4306-201ENST00000583390 91 ntBASIC-1.64□□□□□ -2.67
TRAV13-2A0A0B4J235 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.64□□□□□ -2.67
TRAV13-2A0A0B4J235 AC069503.3-201ENST00000618674 145 ntBASIC-1.64□□□□□ -2.67
TRAV13-2A0A0B4J235 Y_RNA.38-201ENST00000362617 102 ntBASIC-1.65□□□□□ -2.67
TRAV13-2A0A0B4J235 RNU6-38P-201ENST00000384085 107 ntBASIC-1.65□□□□□ -2.67
TRAV13-2A0A0B4J235 RNU6-318P-201ENST00000384283 103 ntBASIC-1.65□□□□□ -2.67
TRAV13-2A0A0B4J235 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.65□□□□□ -2.67
TRAV13-2A0A0B4J235 UBE2V1P7-201ENST00000446395 340 ntBASIC-1.65□□□□□ -2.67
TRAV13-2A0A0B4J235 SCARNA18B-201ENST00000458806 135 ntBASIC-1.65□□□□□ -2.67
TRAV13-2A0A0B4J235 RNU7-74P-201ENST00000459104 62 ntBASIC-1.65□□□□□ -2.67
TRAV13-2A0A0B4J235 RNU7-55P-201ENST00000459426 62 ntBASIC-1.65□□□□□ -2.67
TRAV13-2A0A0B4J235 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-1.65□□□□□ -2.67
TRAV13-2A0A0B4J235 AC087752.4-201ENST00000605911 462 ntBASIC-1.65□□□□□ -2.67
TRAV13-2A0A0B4J235 Y_RNA.101-201ENST00000363154 102 ntBASIC-1.66□□□□□ -2.68
TRAV13-2A0A0B4J235 RNU4-50P-201ENST00000364361 141 ntBASIC-1.66□□□□□ -2.68
TRAV13-2A0A0B4J235 RNY1P13-201ENST00000365030 105 ntBASIC-1.66□□□□□ -2.68
TRAV13-2A0A0B4J235 RNU6-95P-201ENST00000384697 107 ntBASIC-1.66□□□□□ -2.68
TRAV13-2A0A0B4J235 SNORA40.3-201ENST00000390964 122 ntBASIC-1.66□□□□□ -2.68
TRAV13-2A0A0B4J235 snoU13.13-201ENST00000458842 104 ntBASIC-1.66□□□□□ -2.68
TRAV13-2A0A0B4J235 RNU6-1208P-201ENST00000459588 107 ntBASIC-1.66□□□□□ -2.68
TRAV13-2A0A0B4J235 SNORA18.6-201ENST00000516792 115 ntBASIC-1.66□□□□□ -2.68
TRAV13-2A0A0B4J235 MIR3115-201ENST00000577915 68 ntBASIC-1.66□□□□□ -2.68
TRAV13-2A0A0B4J235 MIR3920-201ENST00000581751 86 ntBASIC-1.66□□□□□ -2.68
TRAV13-2A0A0B4J235 AL354950.2-201ENST00000617939 290 ntBASIC-1.66□□□□□ -2.68
TRAV13-2A0A0B4J235 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.67□□□□□ -2.68
TRAV13-2A0A0B4J235 Y_RNA.159-201ENST00000363674 87 ntBASIC-1.67□□□□□ -2.68
TRAV13-2A0A0B4J235 Y_RNA.310-201ENST00000365063 113 ntBASIC-1.67□□□□□ -2.68
TRAV13-2A0A0B4J235 Y_RNA.364-201ENST00000365532 101 ntBASIC-1.67□□□□□ -2.68
TRAV13-2A0A0B4J235 SNORD24-201ENST00000383884 75 ntBASIC-1.67□□□□□ -2.68
TRAV13-2A0A0B4J235 RNU6-154P-201ENST00000384306 106 ntBASIC-1.67□□□□□ -2.68
TRAV13-2A0A0B4J235 Y_RNA.557-201ENST00000384680 107 ntBASIC-1.67□□□□□ -2.68
TRAV13-2A0A0B4J235 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-1.67□□□□□ -2.68
TRAV13-2A0A0B4J235 RNU7-115P-201ENST00000516433 55 ntBASIC-1.67□□□□□ -2.68
TRAV13-2A0A0B4J235 AC040926.1-201ENST00000530195 238 ntBASIC-1.67□□□□□ -2.68
TRAV13-2A0A0B4J235 YWHAEP2-201ENST00000580066 112 ntBASIC-1.67□□□□□ -2.68
TRAV13-2A0A0B4J235 MIR548AE1-201ENST00000583292 70 ntBASIC-1.67□□□□□ -2.68
TRAV13-2A0A0B4J235 RNA5SP133-201ENST00000363368 119 ntBASIC-1.68□□□□□ -2.68
TRAV13-2A0A0B4J235 Y_RNA.430-201ENST00000384081 110 ntBASIC-1.68□□□□□ -2.68
TRAV13-2A0A0B4J235 MIR190B-201ENST00000401119 79 ntBASIC-1.68□□□□□ -2.68
TRAV13-2A0A0B4J235 RNU7-45P-201ENST00000459460 63 ntBASIC-1.68□□□□□ -2.68
TRAV13-2A0A0B4J235 MTND3P7-201ENST00000474435 343 ntBASIC-1.68□□□□□ -2.68
TRAV13-2A0A0B4J235 RNU6-408P-201ENST00000515910 100 ntBASIC-1.68□□□□□ -2.68
TRAV13-2A0A0B4J235 SNORD36C-201ENST00000516733 66 ntBASIC-1.68□□□□□ -2.68
TRAV13-2A0A0B4J235 MIR548H5-201ENST00000580314 60 ntBASIC-1.68□□□□□ -2.68
TRAV13-2A0A0B4J235 AC060780.3-201ENST00000589464 80 ntBASIC-1.68□□□□□ -2.68
TRAV13-2A0A0B4J235 AC007494.3-201ENST00000624660 743 ntBASIC-1.68□□□□□ -2.68
TRAV13-2A0A0B4J235 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.69□□□□□ -2.68
TRAV13-2A0A0B4J235 RNU4-66P-201ENST00000365199 138 ntBASIC-1.69□□□□□ -2.68
TRAV13-2A0A0B4J235 SNORD64-201ENST00000386683 67 ntBASIC-1.69□□□□□ -2.68
TRAV13-2A0A0B4J235 AP000533.3-201ENST00000447704 118 ntBASIC-1.69□□□□□ -2.68
TRAV13-2A0A0B4J235 SNORD57-201ENST00000448188 72 ntBASIC-1.69□□□□□ -2.68
TRAV13-2A0A0B4J235 AC019193.3-201ENST00000609144 554 ntBASIC-1.69□□□□□ -2.68
TRAV13-2A0A0B4J235 AL157392.4-201ENST00000609756 345 ntBASIC-1.69□□□□□ -2.68
TRAV13-2A0A0B4J235 SNORD113-6-201ENST00000363345 75 ntBASIC-1.7□□□□□ -2.68
TRAV13-2A0A0B4J235 RNU4-32P-201ENST00000363404 141 ntBASIC-1.7□□□□□ -2.68
TRAV13-2A0A0B4J235 Y_RNA.341-201ENST00000365341 102 ntBASIC-1.7□□□□□ -2.68
TRAV13-2A0A0B4J235 RNU6-431P-201ENST00000383874 107 ntBASIC-1.7□□□□□ -2.68
TRAV13-2A0A0B4J235 RNU6-449P-201ENST00000383914 107 ntBASIC-1.7□□□□□ -2.68
TRAV13-2A0A0B4J235 RNU6-710P-201ENST00000410424 105 ntBASIC-1.7□□□□□ -2.68
TRAV13-2A0A0B4J235 SNORD12B-201ENST00000410433 91 ntBASIC-1.7□□□□□ -2.68
TRAV13-2A0A0B4J235 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-1.7□□□□□ -2.68
TRAV13-2A0A0B4J235 MIR4273-201ENST00000582824 84 ntBASIC-1.7□□□□□ -2.68
TRAV13-2A0A0B4J235 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-1.7□□□□□ -2.68
TRAV13-2A0A0B4J235 AC124303.1-201ENST00000605703 360 ntBASIC-1.7□□□□□ -2.68
TRAV13-2A0A0B4J235 AC122108.2-201ENST00000611946 526 ntBASIC-1.7□□□□□ -2.68
TRAV13-2A0A0B4J235 Y_RNA.142-201ENST00000363491 102 ntBASIC-1.71□□□□□ -2.68
TRAV13-2A0A0B4J235 RNU6-961P-201ENST00000363893 105 ntBASIC-1.71□□□□□ -2.68
TRAV13-2A0A0B4J235 SNORD116-9-201ENST00000384000 95 ntBASIC-1.71□□□□□ -2.68
TRAV13-2A0A0B4J235 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.71□□□□□ -2.68
TRAV13-2A0A0B4J235 SNORD116-3-201ENST00000384287 95 ntBASIC-1.71□□□□□ -2.68
TRAV13-2A0A0B4J235 SNORD116-8-201ENST00000384365 95 ntBASIC-1.71□□□□□ -2.68
TRAV13-2A0A0B4J235 SNORD116-7-201ENST00000384404 95 ntBASIC-1.71□□□□□ -2.68
TRAV13-2A0A0B4J235 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.71□□□□□ -2.68
TRAV13-2A0A0B4J235 SNORD116-5-201ENST00000384462 95 ntBASIC-1.71□□□□□ -2.68
TRAV13-2A0A0B4J235 RNU6-297P-201ENST00000384636 107 ntBASIC-1.71□□□□□ -2.68
TRAV13-2A0A0B4J235 RNU6-906P-201ENST00000384700 70 ntBASIC-1.71□□□□□ -2.68
TRAV13-2A0A0B4J235 RNU6-1158P-201ENST00000391167 107 ntBASIC-1.71□□□□□ -2.68
TRAV13-2A0A0B4J235 Y_RNA.587-201ENST00000391210 103 ntBASIC-1.71□□□□□ -2.68
TRAV13-2A0A0B4J235 AC011603.4-201ENST00000611325 277 ntBASIC-1.71□□□□□ -2.68
TRAV13-2A0A0B4J235 MIR548AY-201ENST00000617669 107 ntBASIC-1.71□□□□□ -2.68
TRAV13-2A0A0B4J235 RNU6-254P-201ENST00000363377 107 ntBASIC-1.72□□□□□ -2.68
TRAV13-2A0A0B4J235 RNU6-596P-201ENST00000365395 98 ntBASIC-1.72□□□□□ -2.68
TRAV13-2A0A0B4J235 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.72□□□□□ -2.68
TRAV13-2A0A0B4J235 Y_RNA.456-201ENST00000384232 111 ntBASIC-1.72□□□□□ -2.68
TRAV13-2A0A0B4J235 MIR599-201ENST00000385069 95 ntBASIC-1.72□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 216.2 ms