Protein–RNA interactions for Protein: Q9Y661

HS3ST4, Heparan sulfate glucosamine 3-O-sulfotransferase 4, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST4Q9Y661 SCARNA15-202ENST00000516881 127 ntBASIC2.13□□□□□ -2.07
HS3ST4Q9Y661 MIR4287-201ENST00000579398 78 ntBASIC2.13□□□□□ -2.07
HS3ST4Q9Y661 AL137067.1-201ENST00000615933 120 ntBASIC2.13□□□□□ -2.07
HS3ST4Q9Y661 MIR7843-201ENST00000622274 79 ntBASIC2.13□□□□□ -2.07
HS3ST4Q9Y661 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.13□□□□□ -2.07
HS3ST4Q9Y661 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.13□□□□□ -2.07
HS3ST4Q9Y661 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
HS3ST4Q9Y661 U8.5-201ENST00000364528 136 ntBASIC2.12□□□□□ -2.07
HS3ST4Q9Y661 SNORA2.2-201ENST00000365473 135 ntBASIC2.12□□□□□ -2.07
HS3ST4Q9Y661 RNU6-1189P-201ENST00000383958 107 ntBASIC2.12□□□□□ -2.07
HS3ST4Q9Y661 Y_RNA.410-201ENST00000383992 113 ntBASIC2.12□□□□□ -2.07
HS3ST4Q9Y661 RNA5SP482-201ENST00000391269 118 ntBASIC2.12□□□□□ -2.07
HS3ST4Q9Y661 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.12□□□□□ -2.07
HS3ST4Q9Y661 AL445646.1-201ENST00000431784 216 ntBASIC2.12□□□□□ -2.07
HS3ST4Q9Y661 RNU7-25P-201ENST00000516544 62 ntBASIC2.12□□□□□ -2.07
HS3ST4Q9Y661 SNORD45.4-201ENST00000516629 73 ntBASIC2.12□□□□□ -2.07
HS3ST4Q9Y661 SUB1P4-201ENST00000566062 339 ntBASIC2.12□□□□□ -2.07
HS3ST4Q9Y661 MIR4762-201ENST00000585261 75 ntBASIC2.12□□□□□ -2.07
HS3ST4Q9Y661 AC006441.5-201ENST00000612680 209 ntBASIC2.12□□□□□ -2.07
HS3ST4Q9Y661 Y_RNA.783-201ENST00000613546 102 ntBASIC2.12□□□□□ -2.07
HS3ST4Q9Y661 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
HS3ST4Q9Y661 RNA5SP276-201ENST00000362580 94 ntBASIC2.11□□□□□ -2.07
HS3ST4Q9Y661 SNORD115-28-201ENST00000363931 81 ntBASIC2.11□□□□□ -2.07
HS3ST4Q9Y661 Y_RNA.366-201ENST00000365540 102 ntBASIC2.11□□□□□ -2.07
HS3ST4Q9Y661 MIR144-201ENST00000384886 86 ntBASIC2.11□□□□□ -2.07
HS3ST4Q9Y661 MIR17-201ENST00000385012 84 ntBASIC2.11□□□□□ -2.07
HS3ST4Q9Y661 RNA5SP109-201ENST00000391010 116 ntBASIC2.11□□□□□ -2.07
HS3ST4Q9Y661 RNA5SP136-201ENST00000410906 107 ntBASIC2.11□□□□□ -2.07
HS3ST4Q9Y661 AL606517.2-201ENST00000442855 241 ntBASIC2.11□□□□□ -2.07
HS3ST4Q9Y661 RNU7-28P-201ENST00000516759 62 ntBASIC2.11□□□□□ -2.07
HS3ST4Q9Y661 RNU7-70P-201ENST00000516941 66 ntBASIC2.11□□□□□ -2.07
HS3ST4Q9Y661 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.11□□□□□ -2.07
HS3ST4Q9Y661 MIR376A2-201ENST00000636782 80 ntBASIC2.11□□□□□ -2.07
HS3ST4Q9Y661 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
HS3ST4Q9Y661 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
HS3ST4Q9Y661 RNU6-268P-201ENST00000364174 107 ntBASIC2.1□□□□□ -2.07
HS3ST4Q9Y661 Y_RNA.336-201ENST00000365307 109 ntBASIC2.1□□□□□ -2.07
HS3ST4Q9Y661 SNORA80E-201ENST00000384744 137 ntBASIC2.1□□□□□ -2.07
HS3ST4Q9Y661 RNA5SP212-201ENST00000391223 107 ntBASIC2.1□□□□□ -2.07
HS3ST4Q9Y661 CALM2P4-201ENST00000430810 426 ntBASIC2.1□□□□□ -2.07
HS3ST4Q9Y661 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
HS3ST4Q9Y661 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.1□□□□□ -2.07
HS3ST4Q9Y661 RNU6-412P-201ENST00000516434 106 ntBASIC2.1□□□□□ -2.07
HS3ST4Q9Y661 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.1□□□□□ -2.07
HS3ST4Q9Y661 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.1□□□□□ -2.07
HS3ST4Q9Y661 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.1□□□□□ -2.07
HS3ST4Q9Y661 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
HS3ST4Q9Y661 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.1□□□□□ -2.07
HS3ST4Q9Y661 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
HS3ST4Q9Y661 AC092881.1-201ENST00000638218 2733 ntBASIC2.09□□□□□ -2.07
HS3ST4Q9Y661 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
HS3ST4Q9Y661 Y_RNA.37-201ENST00000362606 108 ntBASIC2.09□□□□□ -2.07
HS3ST4Q9Y661 SNORD114-1-201ENST00000362705 72 ntBASIC2.09□□□□□ -2.07
HS3ST4Q9Y661 RNA5SP160-201ENST00000364866 120 ntBASIC2.09□□□□□ -2.07
HS3ST4Q9Y661 Y_RNA.547-201ENST00000384654 119 ntBASIC2.09□□□□□ -2.07
HS3ST4Q9Y661 MIR570-201ENST00000384917 97 ntBASIC2.09□□□□□ -2.07
HS3ST4Q9Y661 STAG3L5P-204ENST00000443759 179 ntBASIC2.09□□□□□ -2.07
HS3ST4Q9Y661 HMGN2P32-201ENST00000444648 269 ntBASIC2.09□□□□□ -2.07
HS3ST4Q9Y661 RNA5SP57-201ENST00000459463 123 ntBASIC2.09□□□□□ -2.07
HS3ST4Q9Y661 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.09□□□□□ -2.07
HS3ST4Q9Y661 RNU6-240P-201ENST00000516098 97 ntBASIC2.09□□□□□ -2.07
HS3ST4Q9Y661 RNA5SP170-201ENST00000517150 101 ntBASIC2.09□□□□□ -2.07
HS3ST4Q9Y661 AC084364.2-201ENST00000546924 395 ntBASIC2.09□□□□□ -2.07
HS3ST4Q9Y661 AC015726.2-201ENST00000620112 122 ntBASIC2.09□□□□□ -2.07
HS3ST4Q9Y661 RNU6-1298P-201ENST00000362456 101 ntBASIC2.08□□□□□ -2.08
HS3ST4Q9Y661 RNU6-690P-201ENST00000365242 106 ntBASIC2.08□□□□□ -2.08
HS3ST4Q9Y661 MIR520A-201ENST00000384862 85 ntBASIC2.08□□□□□ -2.08
HS3ST4Q9Y661 AL031737.1-201ENST00000450125 223 ntBASIC2.08□□□□□ -2.08
HS3ST4Q9Y661 COX6CP6-201ENST00000490840 228 ntBASIC2.08□□□□□ -2.08
HS3ST4Q9Y661 RNU6-168P-201ENST00000516189 101 ntBASIC2.08□□□□□ -2.08
HS3ST4Q9Y661 AC007012.1-201ENST00000567192 175 ntBASIC2.08□□□□□ -2.08
HS3ST4Q9Y661 uc_338.28-201ENST00000612082 187 ntBASIC2.08□□□□□ -2.08
HS3ST4Q9Y661 AL773524.1-201ENST00000614065 229 ntBASIC2.08□□□□□ -2.08
HS3ST4Q9Y661 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.08□□□□□ -2.08
HS3ST4Q9Y661 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
HS3ST4Q9Y661 AL596028.1-201ENST00000326971 197 ntBASIC2.07□□□□□ -2.08
HS3ST4Q9Y661 MIR450A1-201ENST00000362262 91 ntBASIC2.07□□□□□ -2.08
HS3ST4Q9Y661 Y_RNA.43-201ENST00000362670 111 ntBASIC2.07□□□□□ -2.08
HS3ST4Q9Y661 Y_RNA.116-201ENST00000363292 103 ntBASIC2.07□□□□□ -2.08
HS3ST4Q9Y661 RNU6-112P-201ENST00000363599 104 ntBASIC2.07□□□□□ -2.08
HS3ST4Q9Y661 RNU6-163P-201ENST00000384396 106 ntBASIC2.07□□□□□ -2.08
HS3ST4Q9Y661 RNU6-440P-201ENST00000390882 105 ntBASIC2.07□□□□□ -2.08
HS3ST4Q9Y661 RNA5SP89-201ENST00000410300 108 ntBASIC2.07□□□□□ -2.08
HS3ST4Q9Y661 RNA5SP100-201ENST00000410903 110 ntBASIC2.07□□□□□ -2.08
HS3ST4Q9Y661 RNA5SP59-201ENST00000410922 110 ntBASIC2.07□□□□□ -2.08
HS3ST4Q9Y661 AC244636.1-201ENST00000421152 228 ntBASIC2.07□□□□□ -2.08
HS3ST4Q9Y661 SNRPGP14-201ENST00000435400 219 ntBASIC2.07□□□□□ -2.08
HS3ST4Q9Y661 AC025033.1-201ENST00000463883 194 ntBASIC2.07□□□□□ -2.08
HS3ST4Q9Y661 RPS26P48-201ENST00000491713 339 ntBASIC2.07□□□□□ -2.08
HS3ST4Q9Y661 SNORA31.11-201ENST00000516528 139 ntBASIC2.07□□□□□ -2.08
HS3ST4Q9Y661 SNORD36C-201ENST00000516733 66 ntBASIC2.07□□□□□ -2.08
HS3ST4Q9Y661 SNORA18.7-201ENST00000516910 131 ntBASIC2.07□□□□□ -2.08
HS3ST4Q9Y661 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.07□□□□□ -2.08
HS3ST4Q9Y661 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.07□□□□□ -2.08
HS3ST4Q9Y661 MIR5089-201ENST00000580047 84 ntBASIC2.07□□□□□ -2.08
HS3ST4Q9Y661 MIR4524B-201ENST00000581569 115 ntBASIC2.07□□□□□ -2.08
HS3ST4Q9Y661 SNORA28-201ENST00000606769 126 ntBASIC2.07□□□□□ -2.08
HS3ST4Q9Y661 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.07□□□□□ -2.08
HS3ST4Q9Y661 MIR8054-201ENST00000620877 86 ntBASIC2.07□□□□□ -2.08
HS3ST4Q9Y661 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 212.4 ms