Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.88□□□□□ -1.95
PCDHGA11Q9Y5H2 RNU2-13P-201ENST00000515909 113 ntBASIC2.88□□□□□ -1.95
PCDHGA11Q9Y5H2 AC107016.2-201ENST00000547968 190 ntBASIC2.88□□□□□ -1.95
PCDHGA11Q9Y5H2 AC007318.2-201ENST00000620999 243 ntBASIC2.88□□□□□ -1.95
PCDHGA11Q9Y5H2 AC064859.1-201ENST00000624741 174 ntBASIC2.88□□□□□ -1.95
PCDHGA11Q9Y5H2 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
PCDHGA11Q9Y5H2 SNORA71.1-201ENST00000364523 117 ntBASIC2.87□□□□□ -1.95
PCDHGA11Q9Y5H2 Y_RNA.430-201ENST00000384081 110 ntBASIC2.87□□□□□ -1.95
PCDHGA11Q9Y5H2 RNU6-296P-201ENST00000384608 107 ntBASIC2.87□□□□□ -1.95
PCDHGA11Q9Y5H2 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.87□□□□□ -1.95
PCDHGA11Q9Y5H2 MIR548AR-201ENST00000582191 57 ntBASIC2.87□□□□□ -1.95
PCDHGA11Q9Y5H2 Y_RNA.773-201ENST00000607168 90 ntBASIC2.87□□□□□ -1.95
PCDHGA11Q9Y5H2 MIR1255B1-201ENST00000636325 63 ntBASIC2.87□□□□□ -1.95
PCDHGA11Q9Y5H2 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
PCDHGA11Q9Y5H2 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
PCDHGA11Q9Y5H2 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
PCDHGA11Q9Y5H2 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
PCDHGA11Q9Y5H2 Y_RNA.360-201ENST00000365512 102 ntBASIC2.86□□□□□ -1.95
PCDHGA11Q9Y5H2 Y_RNA.537-201ENST00000384626 109 ntBASIC2.86□□□□□ -1.95
PCDHGA11Q9Y5H2 AC105272.1-201ENST00000438604 198 ntBASIC2.86□□□□□ -1.95
PCDHGA11Q9Y5H2 AC008885.1-201ENST00000514930 301 ntBASIC2.86□□□□□ -1.95
PCDHGA11Q9Y5H2 MIR3944-201ENST00000581277 108 ntBASIC2.86□□□□□ -1.95
PCDHGA11Q9Y5H2 MIR4791-201ENST00000607666 84 ntBASIC2.86□□□□□ -1.95
PCDHGA11Q9Y5H2 MIR6717-201ENST00000622747 73 ntBASIC2.86□□□□□ -1.95
PCDHGA11Q9Y5H2 MIR424-201ENST00000362227 98 ntBASIC2.85□□□□□ -1.95
PCDHGA11Q9Y5H2 RNU6-832P-201ENST00000363319 107 ntBASIC2.85□□□□□ -1.95
PCDHGA11Q9Y5H2 SNORA54-201ENST00000384281 123 ntBASIC2.85□□□□□ -1.95
PCDHGA11Q9Y5H2 RNY1P7-201ENST00000384743 110 ntBASIC2.85□□□□□ -1.95
PCDHGA11Q9Y5H2 HMGN2P35-201ENST00000412164 270 ntBASIC2.85□□□□□ -1.95
PCDHGA11Q9Y5H2 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.85□□□□□ -1.95
PCDHGA11Q9Y5H2 AC103810.6-201ENST00000606708 136 ntBASIC2.85□□□□□ -1.95
PCDHGA11Q9Y5H2 MIR6841-201ENST00000637129 72 ntBASIC2.85□□□□□ -1.95
PCDHGA11Q9Y5H2 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.85□□□□□ -1.95
PCDHGA11Q9Y5H2 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
PCDHGA11Q9Y5H2 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
PCDHGA11Q9Y5H2 SNORA9.2-201ENST00000365361 133 ntBASIC2.84□□□□□ -1.95
PCDHGA11Q9Y5H2 Y_RNA.466-201ENST00000384294 113 ntBASIC2.84□□□□□ -1.95
PCDHGA11Q9Y5H2 SNORA18-201ENST00000384416 132 ntBASIC2.84□□□□□ -1.95
PCDHGA11Q9Y5H2 RNA5SP492-201ENST00000411330 114 ntBASIC2.84□□□□□ -1.95
PCDHGA11Q9Y5H2 AL020996.3-201ENST00000606617 222 ntBASIC2.84□□□□□ -1.95
PCDHGA11Q9Y5H2 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.84□□□□□ -1.95
PCDHGA11Q9Y5H2 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
PCDHGA11Q9Y5H2 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.83□□□□□ -1.96
PCDHGA11Q9Y5H2 Y_RNA.96-201ENST00000363092 109 ntBASIC2.83□□□□□ -1.96
PCDHGA11Q9Y5H2 Y_RNA.342-201ENST00000365352 113 ntBASIC2.83□□□□□ -1.96
PCDHGA11Q9Y5H2 RNU6-851P-201ENST00000384565 107 ntBASIC2.83□□□□□ -1.96
PCDHGA11Q9Y5H2 MIR577-201ENST00000385196 96 ntBASIC2.83□□□□□ -1.96
PCDHGA11Q9Y5H2 SNORA26.6-201ENST00000391256 115 ntBASIC2.83□□□□□ -1.96
PCDHGA11Q9Y5H2 SNORD88.1-201ENST00000408684 91 ntBASIC2.83□□□□□ -1.96
PCDHGA11Q9Y5H2 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.83□□□□□ -1.96
PCDHGA11Q9Y5H2 BX510359.1-201ENST00000456973 237 ntBASIC2.83□□□□□ -1.96
PCDHGA11Q9Y5H2 RNU6-1258P-201ENST00000516911 111 ntBASIC2.83□□□□□ -1.96
PCDHGA11Q9Y5H2 RNU6-762P-201ENST00000517107 102 ntBASIC2.83□□□□□ -1.96
PCDHGA11Q9Y5H2 FAM106DP-201ENST00000586416 501 ntBASIC2.83□□□□□ -1.96
PCDHGA11Q9Y5H2 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PCDHGA11Q9Y5H2 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.83□□□□□ -1.96
PCDHGA11Q9Y5H2 AC009487.2-201ENST00000420969 6821 ntBASIC2.83□□□□□ -1.96
PCDHGA11Q9Y5H2 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.83□□□□□ -1.96
PCDHGA11Q9Y5H2 MIR526A1-201ENST00000384897 85 ntBASIC2.82□□□□□ -1.96
PCDHGA11Q9Y5H2 SNORD28B-201ENST00000390993 75 ntBASIC2.82□□□□□ -1.96
PCDHGA11Q9Y5H2 SNORA7.5-201ENST00000410672 110 ntBASIC2.82□□□□□ -1.96
PCDHGA11Q9Y5H2 snoU13.16-201ENST00000459350 104 ntBASIC2.82□□□□□ -1.96
PCDHGA11Q9Y5H2 AC099513.1-201ENST00000490423 301 ntBASIC2.82□□□□□ -1.96
PCDHGA11Q9Y5H2 RNU6-1018P-201ENST00000516577 106 ntBASIC2.82□□□□□ -1.96
PCDHGA11Q9Y5H2 MIR548AE2-201ENST00000583456 67 ntBASIC2.82□□□□□ -1.96
PCDHGA11Q9Y5H2 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
PCDHGA11Q9Y5H2 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
PCDHGA11Q9Y5H2 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.82□□□□□ -1.96
PCDHGA11Q9Y5H2 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
PCDHGA11Q9Y5H2 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.81□□□□□ -1.96
PCDHGA11Q9Y5H2 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
PCDHGA11Q9Y5H2 AL161431.1-201ENST00000618966 4205 ntBASIC2.81□□□□□ -1.96
PCDHGA11Q9Y5H2 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.81□□□□□ -1.96
PCDHGA11Q9Y5H2 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
PCDHGA11Q9Y5H2 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.81□□□□□ -1.96
PCDHGA11Q9Y5H2 RNA5SP374-201ENST00000362939 125 ntBASIC2.81□□□□□ -1.96
PCDHGA11Q9Y5H2 RNU6-820P-201ENST00000384273 107 ntBASIC2.81□□□□□ -1.96
PCDHGA11Q9Y5H2 Y_RNA.470-201ENST00000384307 117 ntBASIC2.81□□□□□ -1.96
PCDHGA11Q9Y5H2 MIR450A2-201ENST00000385022 100 ntBASIC2.81□□□□□ -1.96
PCDHGA11Q9Y5H2 MIR605-201ENST00000385078 83 ntBASIC2.81□□□□□ -1.96
PCDHGA11Q9Y5H2 RNU6-360P-201ENST00000390944 104 ntBASIC2.81□□□□□ -1.96
PCDHGA11Q9Y5H2 RPL23AP6-201ENST00000446637 472 ntBASIC2.81□□□□□ -1.96
PCDHGA11Q9Y5H2 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.81□□□□□ -1.96
PCDHGA11Q9Y5H2 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
PCDHGA11Q9Y5H2 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.81□□□□□ -1.96
PCDHGA11Q9Y5H2 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.81□□□□□ -1.96
PCDHGA11Q9Y5H2 MIR422A-201ENST00000362286 90 ntBASIC2.8□□□□□ -1.96
PCDHGA11Q9Y5H2 SNORD45B-201ENST00000364617 72 ntBASIC2.8□□□□□ -1.96
PCDHGA11Q9Y5H2 Y_RNA.354-201ENST00000365448 111 ntBASIC2.8□□□□□ -1.96
PCDHGA11Q9Y5H2 RNU6-616P-201ENST00000384353 107 ntBASIC2.8□□□□□ -1.96
PCDHGA11Q9Y5H2 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.8□□□□□ -1.96
PCDHGA11Q9Y5H2 AC096949.1-201ENST00000412047 152 ntBASIC2.8□□□□□ -1.96
PCDHGA11Q9Y5H2 AC022018.1-201ENST00000430685 241 ntBASIC2.8□□□□□ -1.96
PCDHGA11Q9Y5H2 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.8□□□□□ -1.96
PCDHGA11Q9Y5H2 SNORA74.3-201ENST00000517108 154 ntBASIC2.8□□□□□ -1.96
PCDHGA11Q9Y5H2 snoMBII-202.2-201ENST00000517263 86 ntBASIC2.8□□□□□ -1.96
PCDHGA11Q9Y5H2 AC026421.1-201ENST00000519101 163 ntBASIC2.8□□□□□ -1.96
PCDHGA11Q9Y5H2 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.8□□□□□ -1.96
PCDHGA11Q9Y5H2 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.8□□□□□ -1.96
PCDHGA11Q9Y5H2 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms