Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 RNU6-47P-201ENST00000383866 107 ntBASIC2.3□□□□□ -2.04
CDK11AQ9UQ88 RNU6-578P-201ENST00000390980 103 ntBASIC2.3□□□□□ -2.04
CDK11AQ9UQ88 SNORA79-201ENST00000408376 140 ntBASIC2.3□□□□□ -2.04
CDK11AQ9UQ88 AL354695.1-201ENST00000427935 228 ntBASIC2.3□□□□□ -2.04
CDK11AQ9UQ88 AL157834.3-201ENST00000615543 103 ntBASIC2.3□□□□□ -2.04
CDK11AQ9UQ88 AC095038.3-201ENST00000634439 195 ntBASIC2.3□□□□□ -2.04
CDK11AQ9UQ88 Y_RNA.233-201ENST00000364407 101 ntBASIC2.29□□□□□ -2.04
CDK11AQ9UQ88 SNORD1A-201ENST00000364968 72 ntBASIC2.29□□□□□ -2.04
CDK11AQ9UQ88 RNU7-120P-201ENST00000459334 63 ntBASIC2.29□□□□□ -2.04
CDK11AQ9UQ88 RNU6-1299P-201ENST00000516316 100 ntBASIC2.29□□□□□ -2.04
CDK11AQ9UQ88 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.29□□□□□ -2.04
CDK11AQ9UQ88 AC015688.6-201ENST00000577737 104 ntBASIC2.29□□□□□ -2.04
CDK11AQ9UQ88 AC004792.1-201ENST00000614523 137 ntBASIC2.29□□□□□ -2.04
CDK11AQ9UQ88 AL353770.2-201ENST00000620024 78 ntBASIC2.29□□□□□ -2.04
CDK11AQ9UQ88 AL121890.5-201ENST00000620848 304 ntBASIC2.29□□□□□ -2.04
CDK11AQ9UQ88 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CDK11AQ9UQ88 RNU6-997P-201ENST00000384725 107 ntBASIC2.28□□□□□ -2.04
CDK11AQ9UQ88 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.28□□□□□ -2.04
CDK11AQ9UQ88 RNU6-1116P-201ENST00000517269 99 ntBASIC2.28□□□□□ -2.04
CDK11AQ9UQ88 Y_RNA.75-201ENST00000362927 97 ntBASIC2.27□□□□□ -2.05
CDK11AQ9UQ88 Y_RNA.432-201ENST00000384087 111 ntBASIC2.27□□□□□ -2.05
CDK11AQ9UQ88 AC027119.1-201ENST00000440877 241 ntBASIC2.27□□□□□ -2.05
CDK11AQ9UQ88 AL121914.1-201ENST00000450188 156 ntBASIC2.27□□□□□ -2.05
CDK11AQ9UQ88 AC109810.1-201ENST00000534066 224 ntBASIC2.27□□□□□ -2.05
CDK11AQ9UQ88 AC108706.1-201ENST00000611053 297 ntBASIC2.27□□□□□ -2.05
CDK11AQ9UQ88 RNU6-275P-201ENST00000364910 107 ntBASIC2.26□□□□□ -2.05
CDK11AQ9UQ88 MIR452-201ENST00000385020 85 ntBASIC2.26□□□□□ -2.05
CDK11AQ9UQ88 MIR513A1-201ENST00000385138 129 ntBASIC2.26□□□□□ -2.05
CDK11AQ9UQ88 Y_RNA.622-201ENST00000411091 108 ntBASIC2.26□□□□□ -2.05
CDK11AQ9UQ88 RNU1-123P-201ENST00000458950 160 ntBASIC2.26□□□□□ -2.05
CDK11AQ9UQ88 MIR4778-201ENST00000577635 80 ntBASIC2.26□□□□□ -2.05
CDK11AQ9UQ88 MIR3937-201ENST00000580135 106 ntBASIC2.26□□□□□ -2.05
CDK11AQ9UQ88 U8.1-201ENST00000362843 134 ntBASIC2.25□□□□□ -2.05
CDK11AQ9UQ88 RNU6-199P-201ENST00000362954 107 ntBASIC2.25□□□□□ -2.05
CDK11AQ9UQ88 Y_RNA.118-201ENST00000363300 101 ntBASIC2.25□□□□□ -2.05
CDK11AQ9UQ88 RNU6-312P-201ENST00000364629 107 ntBASIC2.25□□□□□ -2.05
CDK11AQ9UQ88 SNORD38C-201ENST00000384381 69 ntBASIC2.25□□□□□ -2.05
CDK11AQ9UQ88 RNU6-1065P-201ENST00000384513 106 ntBASIC2.25□□□□□ -2.05
CDK11AQ9UQ88 SNORD72-201ENST00000390994 80 ntBASIC2.25□□□□□ -2.05
CDK11AQ9UQ88 MIR1304-201ENST00000408243 91 ntBASIC2.25□□□□□ -2.05
CDK11AQ9UQ88 RN7SKP51-201ENST00000410781 304 ntBASIC2.25□□□□□ -2.05
CDK11AQ9UQ88 RNA5SP153-201ENST00000516498 76 ntBASIC2.25□□□□□ -2.05
CDK11AQ9UQ88 SUMO2P16-201ENST00000519475 264 ntBASIC2.25□□□□□ -2.05
CDK11AQ9UQ88 MRPS18CP4-201ENST00000535821 231 ntBASIC2.25□□□□□ -2.05
CDK11AQ9UQ88 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CDK11AQ9UQ88 AL161722.3-201ENST00000605789 2983 ntBASIC2.25□□□□□ -2.05
CDK11AQ9UQ88 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
CDK11AQ9UQ88 SNORD45.3-201ENST00000363836 72 ntBASIC2.24□□□□□ -2.05
CDK11AQ9UQ88 RNA5SP259-201ENST00000365541 109 ntBASIC2.24□□□□□ -2.05
CDK11AQ9UQ88 MIR15B-201ENST00000385045 98 ntBASIC2.24□□□□□ -2.05
CDK11AQ9UQ88 RNU2-70P-201ENST00000410718 179 ntBASIC2.24□□□□□ -2.05
CDK11AQ9UQ88 RNU2-64P-201ENST00000411315 191 ntBASIC2.24□□□□□ -2.05
CDK11AQ9UQ88 SNRPGP8-201ENST00000454064 226 ntBASIC2.24□□□□□ -2.05
CDK11AQ9UQ88 RNU6-365P-201ENST00000517113 106 ntBASIC2.24□□□□□ -2.05
CDK11AQ9UQ88 AL160236.1-201ENST00000556317 195 ntBASIC2.24□□□□□ -2.05
CDK11AQ9UQ88 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.24□□□□□ -2.05
CDK11AQ9UQ88 RNU4-43P-201ENST00000410628 137 ntBASIC2.23□□□□□ -2.05
CDK11AQ9UQ88 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.23□□□□□ -2.05
CDK11AQ9UQ88 AC093850.1-201ENST00000454121 251 ntBASIC2.23□□□□□ -2.05
CDK11AQ9UQ88 Y_RNA.662-201ENST00000516028 97 ntBASIC2.23□□□□□ -2.05
CDK11AQ9UQ88 AC019176.1-201ENST00000518519 225 ntBASIC2.23□□□□□ -2.05
CDK11AQ9UQ88 AC098479.1-201ENST00000609225 154 ntBASIC2.23□□□□□ -2.05
CDK11AQ9UQ88 AC006441.5-201ENST00000612680 209 ntBASIC2.23□□□□□ -2.05
CDK11AQ9UQ88 AP000648.3-201ENST00000623539 4507 ntBASIC2.22□□□□□ -2.05
CDK11AQ9UQ88 Y_RNA.23-201ENST00000362496 106 ntBASIC2.22□□□□□ -2.05
CDK11AQ9UQ88 Y_RNA.412-201ENST00000384001 104 ntBASIC2.22□□□□□ -2.05
CDK11AQ9UQ88 RPS27P16-201ENST00000425758 201 ntBASIC2.22□□□□□ -2.05
CDK11AQ9UQ88 RNU6-197P-201ENST00000516680 100 ntBASIC2.22□□□□□ -2.05
CDK11AQ9UQ88 AC022559.1-201ENST00000520905 205 ntBASIC2.22□□□□□ -2.05
CDK11AQ9UQ88 U6.106-201ENST00000636360 105 ntBASIC2.22□□□□□ -2.05
CDK11AQ9UQ88 Y_RNA.224-201ENST00000364308 111 ntBASIC2.21□□□□□ -2.06
CDK11AQ9UQ88 RNU6-484P-201ENST00000384016 107 ntBASIC2.21□□□□□ -2.06
CDK11AQ9UQ88 Y_RNA.486-201ENST00000384398 107 ntBASIC2.21□□□□□ -2.06
CDK11AQ9UQ88 RNU6-1219P-201ENST00000516143 112 ntBASIC2.21□□□□□ -2.06
CDK11AQ9UQ88 RNU6-268P-201ENST00000364174 107 ntBASIC2.2□□□□□ -2.06
CDK11AQ9UQ88 Y_RNA.240-201ENST00000364469 95 ntBASIC2.2□□□□□ -2.06
CDK11AQ9UQ88 SNORA2.2-201ENST00000365473 135 ntBASIC2.2□□□□□ -2.06
CDK11AQ9UQ88 MIR136-201ENST00000385207 82 ntBASIC2.2□□□□□ -2.06
CDK11AQ9UQ88 RNU6-907P-201ENST00000390924 102 ntBASIC2.2□□□□□ -2.06
CDK11AQ9UQ88 AC015922.2-201ENST00000435593 184 ntBASIC2.2□□□□□ -2.06
CDK11AQ9UQ88 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.2□□□□□ -2.06
CDK11AQ9UQ88 RNU6-322P-201ENST00000516010 103 ntBASIC2.2□□□□□ -2.06
CDK11AQ9UQ88 RNU6-504P-201ENST00000516568 104 ntBASIC2.2□□□□□ -2.06
CDK11AQ9UQ88 RNU6-861P-201ENST00000516745 106 ntBASIC2.2□□□□□ -2.06
CDK11AQ9UQ88 RNA5SP102-201ENST00000516865 106 ntBASIC2.2□□□□□ -2.06
CDK11AQ9UQ88 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.2□□□□□ -2.06
CDK11AQ9UQ88 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CDK11AQ9UQ88 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
CDK11AQ9UQ88 Y_RNA.270-201ENST00000364693 104 ntBASIC2.19□□□□□ -2.06
CDK11AQ9UQ88 Y_RNA.634-201ENST00000364811 113 ntBASIC2.19□□□□□ -2.06
CDK11AQ9UQ88 RPS29P23-201ENST00000458635 123 ntBASIC2.19□□□□□ -2.06
CDK11AQ9UQ88 MIR4431-201ENST00000579990 94 ntBASIC2.19□□□□□ -2.06
CDK11AQ9UQ88 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.18□□□□□ -2.06
CDK11AQ9UQ88 RNU6-53P-201ENST00000365367 106 ntBASIC2.18□□□□□ -2.06
CDK11AQ9UQ88 Y_RNA.357-201ENST00000365487 109 ntBASIC2.18□□□□□ -2.06
CDK11AQ9UQ88 SNRPGP14-201ENST00000435400 219 ntBASIC2.18□□□□□ -2.06
CDK11AQ9UQ88 RNU6-561P-201ENST00000516222 102 ntBASIC2.18□□□□□ -2.06
CDK11AQ9UQ88 AC106754.2-201ENST00000623006 233 ntBASIC2.18□□□□□ -2.06
CDK11AQ9UQ88 RNU6-682P-201ENST00000363843 106 ntBASIC2.17□□□□□ -2.06
CDK11AQ9UQ88 RNU6-643P-201ENST00000384018 107 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms