Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 RNU6-1123P-201ENST00000362347 106 ntBASIC1.33□□□□□ -2.2
CLIP2Q9UDT6 Y_RNA.23-201ENST00000362496 106 ntBASIC1.33□□□□□ -2.2
CLIP2Q9UDT6 SNORD114-27-201ENST00000363766 70 ntBASIC1.33□□□□□ -2.2
CLIP2Q9UDT6 Y_RNA.215-201ENST00000364204 112 ntBASIC1.33□□□□□ -2.2
CLIP2Q9UDT6 SNORD113-1-201ENST00000365321 69 ntBASIC1.33□□□□□ -2.2
CLIP2Q9UDT6 Y_RNA.580-201ENST00000391004 95 ntBASIC1.33□□□□□ -2.2
CLIP2Q9UDT6 AL606845.1-201ENST00000404881 255 ntBASIC1.33□□□□□ -2.2
CLIP2Q9UDT6 RPS4XP11-201ENST00000446897 772 ntBASIC1.33□□□□□ -2.2
CLIP2Q9UDT6 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.33□□□□□ -2.2
CLIP2Q9UDT6 RPS27P22-201ENST00000478056 241 ntBASIC1.33□□□□□ -2.2
CLIP2Q9UDT6 AC010598.1-201ENST00000510378 103 ntBASIC1.33□□□□□ -2.2
CLIP2Q9UDT6 AC019288.1-201ENST00000557918 224 ntBASIC1.33□□□□□ -2.2
CLIP2Q9UDT6 MIR4295-201ENST00000585286 85 ntBASIC1.33□□□□□ -2.2
CLIP2Q9UDT6 POLR3GP1-201ENST00000594073 261 ntBASIC1.33□□□□□ -2.2
CLIP2Q9UDT6 AC132825.6-201ENST00000638861 357 ntBASIC1.33□□□□□ -2.2
CLIP2Q9UDT6 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CLIP2Q9UDT6 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.32□□□□□ -2.2
CLIP2Q9UDT6 RNU6-508P-201ENST00000363231 103 ntBASIC1.32□□□□□ -2.2
CLIP2Q9UDT6 Y_RNA.121-201ENST00000363309 113 ntBASIC1.32□□□□□ -2.2
CLIP2Q9UDT6 RNU4-11P-201ENST00000365287 132 ntBASIC1.32□□□□□ -2.2
CLIP2Q9UDT6 RNU6-449P-201ENST00000383914 107 ntBASIC1.32□□□□□ -2.2
CLIP2Q9UDT6 Y_RNA.525-201ENST00000384570 113 ntBASIC1.32□□□□□ -2.2
CLIP2Q9UDT6 MIR613-201ENST00000385248 95 ntBASIC1.32□□□□□ -2.2
CLIP2Q9UDT6 RNA5SP109-201ENST00000391010 116 ntBASIC1.32□□□□□ -2.2
CLIP2Q9UDT6 RNU6-1248P-201ENST00000391096 64 ntBASIC1.32□□□□□ -2.2
CLIP2Q9UDT6 RNU6-257P-201ENST00000410238 98 ntBASIC1.32□□□□□ -2.2
CLIP2Q9UDT6 AC006461.1-201ENST00000412637 326 ntBASIC1.32□□□□□ -2.2
CLIP2Q9UDT6 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.32□□□□□ -2.2
CLIP2Q9UDT6 SNRPGP8-201ENST00000454064 226 ntBASIC1.32□□□□□ -2.2
CLIP2Q9UDT6 RNU7-34P-201ENST00000459394 64 ntBASIC1.32□□□□□ -2.2
CLIP2Q9UDT6 RPL23AP54-201ENST00000495129 419 ntBASIC1.32□□□□□ -2.2
CLIP2Q9UDT6 SNORA25.12-201ENST00000516202 82 ntBASIC1.32□□□□□ -2.2
CLIP2Q9UDT6 RNU7-121P-201ENST00000516604 62 ntBASIC1.32□□□□□ -2.2
CLIP2Q9UDT6 AC127455.1-201ENST00000565496 145 ntBASIC1.32□□□□□ -2.2
CLIP2Q9UDT6 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CLIP2Q9UDT6 AP003357.1-201ENST00000604497 148 ntBASIC1.32□□□□□ -2.2
CLIP2Q9UDT6 Y_RNA.778-201ENST00000620203 90 ntBASIC1.32□□□□□ -2.2
CLIP2Q9UDT6 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.32□□□□□ -2.2
CLIP2Q9UDT6 RNU6-312P-201ENST00000364629 107 ntBASIC1.31□□□□□ -2.2
CLIP2Q9UDT6 Y_RNA.400-201ENST00000383963 111 ntBASIC1.31□□□□□ -2.2
CLIP2Q9UDT6 RNU6-1080P-201ENST00000383982 107 ntBASIC1.31□□□□□ -2.2
CLIP2Q9UDT6 RNU6-768P-201ENST00000384683 107 ntBASIC1.31□□□□□ -2.2
CLIP2Q9UDT6 Y_RNA.568-201ENST00000384742 113 ntBASIC1.31□□□□□ -2.2
CLIP2Q9UDT6 MIR15B-201ENST00000385045 98 ntBASIC1.31□□□□□ -2.2
CLIP2Q9UDT6 MIR616-201ENST00000385293 97 ntBASIC1.31□□□□□ -2.2
CLIP2Q9UDT6 MIR526A2-201ENST00000390198 65 ntBASIC1.31□□□□□ -2.2
CLIP2Q9UDT6 Y_RNA.586-201ENST00000391146 98 ntBASIC1.31□□□□□ -2.2
CLIP2Q9UDT6 RNU6-460P-201ENST00000391158 108 ntBASIC1.31□□□□□ -2.2
CLIP2Q9UDT6 RNU6-710P-201ENST00000410424 105 ntBASIC1.31□□□□□ -2.2
CLIP2Q9UDT6 AL162725.1-201ENST00000435405 301 ntBASIC1.31□□□□□ -2.2
CLIP2Q9UDT6 TMSB4XP3-201ENST00000445144 114 ntBASIC1.31□□□□□ -2.2
CLIP2Q9UDT6 AL121914.1-201ENST00000450188 156 ntBASIC1.31□□□□□ -2.2
CLIP2Q9UDT6 RNU7-197P-201ENST00000458836 62 ntBASIC1.31□□□□□ -2.2
CLIP2Q9UDT6 AC097462.1-201ENST00000514125 324 ntBASIC1.31□□□□□ -2.2
CLIP2Q9UDT6 RN7SKP164-201ENST00000516138 266 ntBASIC1.31□□□□□ -2.2
CLIP2Q9UDT6 MIR4431-201ENST00000579990 94 ntBASIC1.31□□□□□ -2.2
CLIP2Q9UDT6 MIR4438-201ENST00000585271 93 ntBASIC1.31□□□□□ -2.2
CLIP2Q9UDT6 AL049861.1-201ENST00000603130 150 ntBASIC1.31□□□□□ -2.2
CLIP2Q9UDT6 AC022217.4-201ENST00000604389 163 ntBASIC1.31□□□□□ -2.2
CLIP2Q9UDT6 AL021707.8-201ENST00000609428 183 ntBASIC1.31□□□□□ -2.2
CLIP2Q9UDT6 AL365222.1-201ENST00000614661 98 ntBASIC1.31□□□□□ -2.2
CLIP2Q9UDT6 U6.73-201ENST00000619194 103 ntBASIC1.31□□□□□ -2.2
CLIP2Q9UDT6 Y_RNA.91-201ENST00000363042 107 ntBASIC1.3□□□□□ -2.2
CLIP2Q9UDT6 SNORD45.3-201ENST00000363836 72 ntBASIC1.3□□□□□ -2.2
CLIP2Q9UDT6 Y_RNA.218-201ENST00000364218 104 ntBASIC1.3□□□□□ -2.2
CLIP2Q9UDT6 RNU6-1082P-201ENST00000364574 107 ntBASIC1.3□□□□□ -2.2
CLIP2Q9UDT6 Y_RNA.488-201ENST00000384403 102 ntBASIC1.3□□□□□ -2.2
CLIP2Q9UDT6 Y_RNA.497-201ENST00000384447 98 ntBASIC1.3□□□□□ -2.2
CLIP2Q9UDT6 MIR513A1-201ENST00000385138 129 ntBASIC1.3□□□□□ -2.2
CLIP2Q9UDT6 RNU6-239P-201ENST00000390990 99 ntBASIC1.3□□□□□ -2.2
CLIP2Q9UDT6 Y_RNA.587-201ENST00000391210 103 ntBASIC1.3□□□□□ -2.2
CLIP2Q9UDT6 MIR548I2-201ENST00000408348 149 ntBASIC1.3□□□□□ -2.2
CLIP2Q9UDT6 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.3□□□□□ -2.2
CLIP2Q9UDT6 AL591704.2-201ENST00000421658 181 ntBASIC1.3□□□□□ -2.2
CLIP2Q9UDT6 SNX2P2-201ENST00000424553 323 ntBASIC1.3□□□□□ -2.2
CLIP2Q9UDT6 AL606517.2-201ENST00000442855 241 ntBASIC1.3□□□□□ -2.2
CLIP2Q9UDT6 HSPE1P13-201ENST00000451143 297 ntBASIC1.3□□□□□ -2.2
CLIP2Q9UDT6 AC087343.1-201ENST00000477341 475 ntBASIC1.3□□□□□ -2.2
CLIP2Q9UDT6 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.3□□□□□ -2.2
CLIP2Q9UDT6 MIR4724-201ENST00000579485 89 ntBASIC1.3□□□□□ -2.2
CLIP2Q9UDT6 AC005972.2-201ENST00000604690 348 ntBASIC1.3□□□□□ -2.2
CLIP2Q9UDT6 AC021506.2-201ENST00000612354 169 ntBASIC1.3□□□□□ -2.2
CLIP2Q9UDT6 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.3□□□□□ -2.2
CLIP2Q9UDT6 MIR367-201ENST00000362299 68 ntBASIC1.29□□□□□ -2.2
CLIP2Q9UDT6 Y_RNA.796-201ENST00000364268 102 ntBASIC1.29□□□□□ -2.2
CLIP2Q9UDT6 Y_RNA.261-201ENST00000364631 102 ntBASIC1.29□□□□□ -2.2
CLIP2Q9UDT6 Y_RNA.291-201ENST00000364886 113 ntBASIC1.29□□□□□ -2.2
CLIP2Q9UDT6 Y_RNA.294-201ENST00000364916 102 ntBASIC1.29□□□□□ -2.2
CLIP2Q9UDT6 Y_RNA.799-201ENST00000364992 102 ntBASIC1.29□□□□□ -2.2
CLIP2Q9UDT6 SNORD114-22-201ENST00000365423 72 ntBASIC1.29□□□□□ -2.2
CLIP2Q9UDT6 RNU6-81P-201ENST00000365608 104 ntBASIC1.29□□□□□ -2.2
CLIP2Q9UDT6 RNU6-484P-201ENST00000384016 107 ntBASIC1.29□□□□□ -2.2
CLIP2Q9UDT6 RNU6-1323P-201ENST00000384025 107 ntBASIC1.29□□□□□ -2.2
CLIP2Q9UDT6 Y_RNA.542-201ENST00000384641 111 ntBASIC1.29□□□□□ -2.2
CLIP2Q9UDT6 RNU6-1031P-201ENST00000384773 107 ntBASIC1.29□□□□□ -2.2
CLIP2Q9UDT6 RNU6-588P-201ENST00000410281 105 ntBASIC1.29□□□□□ -2.2
CLIP2Q9UDT6 RNU6-1186P-201ENST00000410429 97 ntBASIC1.29□□□□□ -2.2
CLIP2Q9UDT6 MTND4LP9-201ENST00000427694 174 ntBASIC1.29□□□□□ -2.2
CLIP2Q9UDT6 RNU6-437P-201ENST00000459408 95 ntBASIC1.29□□□□□ -2.2
CLIP2Q9UDT6 AC092991.1-201ENST00000477176 376 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms