Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 RNU6-1138P-201ENST00000365359 106 ntBASIC1.32□□□□□ -2.2
HCN3Q9P1Z3 MIR222-201ENST00000384992 110 ntBASIC1.32□□□□□ -2.2
HCN3Q9P1Z3 Y_RNA.622-201ENST00000411091 108 ntBASIC1.32□□□□□ -2.2
HCN3Q9P1Z3 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.32□□□□□ -2.2
HCN3Q9P1Z3 COX6CP14-201ENST00000469580 174 ntBASIC1.32□□□□□ -2.2
HCN3Q9P1Z3 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.32□□□□□ -2.2
HCN3Q9P1Z3 RNU7-43P-201ENST00000516554 64 ntBASIC1.32□□□□□ -2.2
HCN3Q9P1Z3 MIR3192-201ENST00000584920 77 ntBASIC1.32□□□□□ -2.2
HCN3Q9P1Z3 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.32□□□□□ -2.2
HCN3Q9P1Z3 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
HCN3Q9P1Z3 U8.1-201ENST00000362843 134 ntBASIC1.31□□□□□ -2.2
HCN3Q9P1Z3 snoU2_19.4-201ENST00000364329 80 ntBASIC1.31□□□□□ -2.2
HCN3Q9P1Z3 SNORA20.1-201ENST00000364790 130 ntBASIC1.31□□□□□ -2.2
HCN3Q9P1Z3 Y_RNA.307-201ENST00000365022 117 ntBASIC1.31□□□□□ -2.2
HCN3Q9P1Z3 RNU4-17P-201ENST00000365598 141 ntBASIC1.31□□□□□ -2.2
HCN3Q9P1Z3 Y_RNA.486-201ENST00000384398 107 ntBASIC1.31□□□□□ -2.2
HCN3Q9P1Z3 U8.17-201ENST00000391292 132 ntBASIC1.31□□□□□ -2.2
HCN3Q9P1Z3 MIR548O-201ENST00000408583 114 ntBASIC1.31□□□□□ -2.2
HCN3Q9P1Z3 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.31□□□□□ -2.2
HCN3Q9P1Z3 MTND1P19-201ENST00000511780 315 ntBASIC1.31□□□□□ -2.2
HCN3Q9P1Z3 SNORA31.4-201ENST00000516049 129 ntBASIC1.31□□□□□ -2.2
HCN3Q9P1Z3 RNU7-25P-201ENST00000516544 62 ntBASIC1.31□□□□□ -2.2
HCN3Q9P1Z3 RNU6-453P-201ENST00000516819 85 ntBASIC1.31□□□□□ -2.2
HCN3Q9P1Z3 RNU7-181P-201ENST00000517234 74 ntBASIC1.31□□□□□ -2.2
HCN3Q9P1Z3 MIR4421-201ENST00000578133 69 ntBASIC1.31□□□□□ -2.2
HCN3Q9P1Z3 MIR548AR-201ENST00000582191 57 ntBASIC1.31□□□□□ -2.2
HCN3Q9P1Z3 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.31□□□□□ -2.2
HCN3Q9P1Z3 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
HCN3Q9P1Z3 Y_RNA.60-201ENST00000362831 98 ntBASIC1.3□□□□□ -2.2
HCN3Q9P1Z3 SNORA7.1-201ENST00000363750 139 ntBASIC1.3□□□□□ -2.2
HCN3Q9P1Z3 Y_RNA.199-201ENST00000364014 102 ntBASIC1.3□□□□□ -2.2
HCN3Q9P1Z3 SNORA25.8-201ENST00000364831 128 ntBASIC1.3□□□□□ -2.2
HCN3Q9P1Z3 RNU6-42P-201ENST00000384165 107 ntBASIC1.3□□□□□ -2.2
HCN3Q9P1Z3 Y_RNA.447-201ENST00000384184 113 ntBASIC1.3□□□□□ -2.2
HCN3Q9P1Z3 Y_RNA.478-201ENST00000384358 107 ntBASIC1.3□□□□□ -2.2
HCN3Q9P1Z3 RNU6-910P-201ENST00000390844 107 ntBASIC1.3□□□□□ -2.2
HCN3Q9P1Z3 SNORD28B-201ENST00000390993 75 ntBASIC1.3□□□□□ -2.2
HCN3Q9P1Z3 AL606845.1-201ENST00000404881 255 ntBASIC1.3□□□□□ -2.2
HCN3Q9P1Z3 AC245047.7-201ENST00000440265 293 ntBASIC1.3□□□□□ -2.2
HCN3Q9P1Z3 RNU7-41P-201ENST00000515917 61 ntBASIC1.3□□□□□ -2.2
HCN3Q9P1Z3 RNU6-1299P-201ENST00000516316 100 ntBASIC1.3□□□□□ -2.2
HCN3Q9P1Z3 RNY3P16-201ENST00000516338 101 ntBASIC1.3□□□□□ -2.2
HCN3Q9P1Z3 RNU6-830P-201ENST00000516353 107 ntBASIC1.3□□□□□ -2.2
HCN3Q9P1Z3 Y_RNA.680-201ENST00000516441 93 ntBASIC1.3□□□□□ -2.2
HCN3Q9P1Z3 RNA5SP61-201ENST00000516453 100 ntBASIC1.3□□□□□ -2.2
HCN3Q9P1Z3 RNU6-365P-201ENST00000517113 106 ntBASIC1.3□□□□□ -2.2
HCN3Q9P1Z3 SNORA70.22-201ENST00000517160 124 ntBASIC1.3□□□□□ -2.2
HCN3Q9P1Z3 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
HCN3Q9P1Z3 Y_RNA.20-201ENST00000362479 113 ntBASIC1.29□□□□□ -2.2
HCN3Q9P1Z3 RNU6-653P-201ENST00000363074 106 ntBASIC1.29□□□□□ -2.2
HCN3Q9P1Z3 Y_RNA.308-201ENST00000365043 101 ntBASIC1.29□□□□□ -2.2
HCN3Q9P1Z3 RNU2-70P-201ENST00000410718 179 ntBASIC1.29□□□□□ -2.2
HCN3Q9P1Z3 RNU6-1054P-201ENST00000411293 104 ntBASIC1.29□□□□□ -2.2
HCN3Q9P1Z3 SCARNA8-201ENST00000515924 131 ntBASIC1.29□□□□□ -2.2
HCN3Q9P1Z3 SNORA25.3-201ENST00000363205 127 ntBASIC1.28□□□□□ -2.2
HCN3Q9P1Z3 Y_RNA.191-201ENST00000363972 113 ntBASIC1.28□□□□□ -2.2
HCN3Q9P1Z3 Y_RNA.539-201ENST00000384635 107 ntBASIC1.28□□□□□ -2.2
HCN3Q9P1Z3 Y_RNA.547-201ENST00000384654 119 ntBASIC1.28□□□□□ -2.2
HCN3Q9P1Z3 RNU6-1067P-201ENST00000384752 107 ntBASIC1.28□□□□□ -2.2
HCN3Q9P1Z3 MIR570-201ENST00000384917 97 ntBASIC1.28□□□□□ -2.2
HCN3Q9P1Z3 MIR616-201ENST00000385293 97 ntBASIC1.28□□□□□ -2.2
HCN3Q9P1Z3 RNU6-493P-201ENST00000391321 108 ntBASIC1.28□□□□□ -2.2
HCN3Q9P1Z3 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.28□□□□□ -2.2
HCN3Q9P1Z3 AL133373.1-201ENST00000497098 94 ntBASIC1.28□□□□□ -2.2
HCN3Q9P1Z3 RNU6-693P-201ENST00000516134 107 ntBASIC1.28□□□□□ -2.2
HCN3Q9P1Z3 RNU6-126P-201ENST00000516685 103 ntBASIC1.28□□□□□ -2.2
HCN3Q9P1Z3 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.28□□□□□ -2.2
HCN3Q9P1Z3 AL160236.1-201ENST00000556317 195 ntBASIC1.28□□□□□ -2.2
HCN3Q9P1Z3 AC004817.2-201ENST00000561794 651 ntBASIC1.28□□□□□ -2.2
HCN3Q9P1Z3 MIR4452-201ENST00000583004 71 ntBASIC1.28□□□□□ -2.2
HCN3Q9P1Z3 AL022345.2-201ENST00000606307 135 ntBASIC1.28□□□□□ -2.2
HCN3Q9P1Z3 AL157834.3-201ENST00000615543 103 ntBASIC1.28□□□□□ -2.2
HCN3Q9P1Z3 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.28□□□□□ -2.2
HCN3Q9P1Z3 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
HCN3Q9P1Z3 SNORA1.2-201ENST00000365189 134 ntBASIC1.27□□□□□ -2.21
HCN3Q9P1Z3 Y_RNA.370-201ENST00000365589 108 ntBASIC1.27□□□□□ -2.21
HCN3Q9P1Z3 Y_RNA.432-201ENST00000384087 111 ntBASIC1.27□□□□□ -2.21
HCN3Q9P1Z3 RNY3P5-201ENST00000384127 102 ntBASIC1.27□□□□□ -2.21
HCN3Q9P1Z3 SNORA25-201ENST00000384384 134 ntBASIC1.27□□□□□ -2.21
HCN3Q9P1Z3 Y_RNA.540-201ENST00000384638 111 ntBASIC1.27□□□□□ -2.21
HCN3Q9P1Z3 RNU6-1228P-201ENST00000391014 107 ntBASIC1.27□□□□□ -2.21
HCN3Q9P1Z3 RNU6-381P-201ENST00000391259 108 ntBASIC1.27□□□□□ -2.21
HCN3Q9P1Z3 RNU1-123P-201ENST00000458950 160 ntBASIC1.27□□□□□ -2.21
HCN3Q9P1Z3 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.27□□□□□ -2.21
HCN3Q9P1Z3 RNU6-1023P-201ENST00000516137 106 ntBASIC1.27□□□□□ -2.21
HCN3Q9P1Z3 RNA5SP220-201ENST00000516298 104 ntBASIC1.27□□□□□ -2.21
HCN3Q9P1Z3 AC011921.3-201ENST00000605540 361 ntBASIC1.27□□□□□ -2.21
HCN3Q9P1Z3 AL391903.3-201ENST00000612158 163 ntBASIC1.27□□□□□ -2.21
HCN3Q9P1Z3 AC008133.2-201ENST00000624540 351 ntBASIC1.27□□□□□ -2.21
HCN3Q9P1Z3 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
HCN3Q9P1Z3 RNU6-923P-201ENST00000364753 107 ntBASIC1.26□□□□□ -2.21
HCN3Q9P1Z3 RNY4P28-201ENST00000365281 93 ntBASIC1.26□□□□□ -2.21
HCN3Q9P1Z3 snosnR66.1-201ENST00000391095 99 ntBASIC1.26□□□□□ -2.21
HCN3Q9P1Z3 SNORA26-201ENST00000391286 122 ntBASIC1.26□□□□□ -2.21
HCN3Q9P1Z3 SNRPGP8-201ENST00000454064 226 ntBASIC1.26□□□□□ -2.21
HCN3Q9P1Z3 AC004223.1-201ENST00000479840 271 ntBASIC1.26□□□□□ -2.21
HCN3Q9P1Z3 RNU4-57P-201ENST00000515980 135 ntBASIC1.26□□□□□ -2.21
HCN3Q9P1Z3 RNU7-40P-201ENST00000516397 64 ntBASIC1.26□□□□□ -2.21
HCN3Q9P1Z3 RNU6-504P-201ENST00000516568 104 ntBASIC1.26□□□□□ -2.21
HCN3Q9P1Z3 RNU6-1270P-201ENST00000517128 108 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 176.5 ms