Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 Y_RNA.562-201ENST00000384695 113 ntBASIC1.02□□□□□ -2.25
HACD3Q9P035 RNU6-1053P-201ENST00000515930 101 ntBASIC1.02□□□□□ -2.25
HACD3Q9P035 RNU4-57P-201ENST00000515980 135 ntBASIC1.02□□□□□ -2.25
HACD3Q9P035 SNORD79.1-201ENST00000516069 84 ntBASIC1.02□□□□□ -2.25
HACD3Q9P035 Y_RNA.668-201ENST00000516233 93 ntBASIC1.02□□□□□ -2.25
HACD3Q9P035 AP003716.2-201ENST00000528260 108 ntBASIC1.02□□□□□ -2.25
HACD3Q9P035 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.02□□□□□ -2.25
HACD3Q9P035 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.02□□□□□ -2.25
HACD3Q9P035 AC015726.2-201ENST00000620112 122 ntBASIC1.02□□□□□ -2.25
HACD3Q9P035 RNU4-38P-201ENST00000364472 129 ntBASIC1.01□□□□□ -2.25
HACD3Q9P035 Y_RNA.277-201ENST00000364754 102 ntBASIC1.01□□□□□ -2.25
HACD3Q9P035 Y_RNA.486-201ENST00000384398 107 ntBASIC1.01□□□□□ -2.25
HACD3Q9P035 Y_RNA.587-201ENST00000391210 103 ntBASIC1.01□□□□□ -2.25
HACD3Q9P035 U8.17-201ENST00000391292 132 ntBASIC1.01□□□□□ -2.25
HACD3Q9P035 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.01□□□□□ -2.25
HACD3Q9P035 AL118496.2-201ENST00000448300 230 ntBASIC1.01□□□□□ -2.25
HACD3Q9P035 RPL39P28-201ENST00000465655 155 ntBASIC1.01□□□□□ -2.25
HACD3Q9P035 RPS23P4-201ENST00000487908 423 ntBASIC1.01□□□□□ -2.25
HACD3Q9P035 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.01□□□□□ -2.25
HACD3Q9P035 SNORD116-28-201ENST00000516123 91 ntBASIC1.01□□□□□ -2.25
HACD3Q9P035 RNU7-25P-201ENST00000516544 62 ntBASIC1.01□□□□□ -2.25
HACD3Q9P035 AC011921.3-201ENST00000605540 361 ntBASIC1.01□□□□□ -2.25
HACD3Q9P035 AL365265.1-201ENST00000621045 234 ntBASIC1.01□□□□□ -2.25
HACD3Q9P035 Y_RNA.76-201ENST00000362931 109 ntBASIC1□□□□□ -2.25
HACD3Q9P035 RNA5SP264-201ENST00000363115 107 ntBASIC1□□□□□ -2.25
HACD3Q9P035 snoU2_19.4-201ENST00000364329 80 ntBASIC1□□□□□ -2.25
HACD3Q9P035 Y_RNA.304-201ENST00000365011 112 ntBASIC1□□□□□ -2.25
HACD3Q9P035 Y_RNA.547-201ENST00000384654 119 ntBASIC1□□□□□ -2.25
HACD3Q9P035 Y_RNA.556-201ENST00000384677 113 ntBASIC1□□□□□ -2.25
HACD3Q9P035 SNORA75.2-201ENST00000391138 150 ntBASIC1□□□□□ -2.25
HACD3Q9P035 SNORA75.3-201ENST00000391231 150 ntBASIC1□□□□□ -2.25
HACD3Q9P035 Y_RNA.638-201ENST00000459374 113 ntBASIC1□□□□□ -2.25
HACD3Q9P035 COX6CP14-201ENST00000469580 174 ntBASIC1□□□□□ -2.25
HACD3Q9P035 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1□□□□□ -2.25
HACD3Q9P035 Y_RNA.666-201ENST00000516187 112 ntBASIC1□□□□□ -2.25
HACD3Q9P035 Y_RNA.679-201ENST00000516416 91 ntBASIC1□□□□□ -2.25
HACD3Q9P035 RNU7-181P-201ENST00000517234 74 ntBASIC1□□□□□ -2.25
HACD3Q9P035 MIR4662B-201ENST00000579498 81 ntBASIC1□□□□□ -2.25
HACD3Q9P035 AL391516.1-201ENST00000554380 2449 ntBASIC0.99□□□□□ -2.25
HACD3Q9P035 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.99□□□□□ -2.25
HACD3Q9P035 Y_RNA.54-201ENST00000362766 105 ntBASIC0.99□□□□□ -2.25
HACD3Q9P035 RNU6-653P-201ENST00000363074 106 ntBASIC0.99□□□□□ -2.25
HACD3Q9P035 SNORA25.3-201ENST00000363205 127 ntBASIC0.99□□□□□ -2.25
HACD3Q9P035 RNU1-124P-201ENST00000363861 145 ntBASIC0.99□□□□□ -2.25
HACD3Q9P035 SNORA80D-201ENST00000384488 135 ntBASIC0.99□□□□□ -2.25
HACD3Q9P035 MIR222-201ENST00000384992 110 ntBASIC0.99□□□□□ -2.25
HACD3Q9P035 MT-TT-201ENST00000387460 66 ntBASIC0.99□□□□□ -2.25
HACD3Q9P035 MIR548O-201ENST00000408583 114 ntBASIC0.99□□□□□ -2.25
HACD3Q9P035 MTND3P2-201ENST00000438452 342 ntBASIC0.99□□□□□ -2.25
HACD3Q9P035 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.99□□□□□ -2.25
HACD3Q9P035 RNU6-1132P-201ENST00000459214 107 ntBASIC0.99□□□□□ -2.25
HACD3Q9P035 SCARNA8-201ENST00000515924 131 ntBASIC0.99□□□□□ -2.25
HACD3Q9P035 AC008133.2-201ENST00000624540 351 ntBASIC0.99□□□□□ -2.25
HACD3Q9P035 RNA5SP48-201ENST00000363969 126 ntBASIC0.98□□□□□ -2.25
HACD3Q9P035 Y_RNA.416-201ENST00000384014 113 ntBASIC0.98□□□□□ -2.25
HACD3Q9P035 MIR570-201ENST00000384917 97 ntBASIC0.98□□□□□ -2.25
HACD3Q9P035 SNORD12-201ENST00000391002 90 ntBASIC0.98□□□□□ -2.25
HACD3Q9P035 MIR1302-3-201ENST00000408128 138 ntBASIC0.98□□□□□ -2.25
HACD3Q9P035 MIR1185-1-201ENST00000408598 86 ntBASIC0.98□□□□□ -2.25
HACD3Q9P035 MIR548H3-201ENST00000408771 118 ntBASIC0.98□□□□□ -2.25
HACD3Q9P035 AC002429.1-201ENST00000437672 148 ntBASIC0.98□□□□□ -2.25
HACD3Q9P035 RNU7-21P-201ENST00000459430 62 ntBASIC0.98□□□□□ -2.25
HACD3Q9P035 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.98□□□□□ -2.25
HACD3Q9P035 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.98□□□□□ -2.25
HACD3Q9P035 MTND1P19-201ENST00000511780 315 ntBASIC0.98□□□□□ -2.25
HACD3Q9P035 RNU6-453P-201ENST00000516819 85 ntBASIC0.98□□□□□ -2.25
HACD3Q9P035 AC007751.1-201ENST00000529260 376 ntBASIC0.98□□□□□ -2.25
HACD3Q9P035 AL442067.1-201ENST00000613261 223 ntBASIC0.98□□□□□ -2.25
HACD3Q9P035 AC012676.2-201ENST00000619258 186 ntBASIC0.98□□□□□ -2.25
HACD3Q9P035 MIR19B1-201ENST00000384829 87 ntBASIC0.97□□□□□ -2.25
HACD3Q9P035 MIR548A2-201ENST00000384956 97 ntBASIC0.97□□□□□ -2.25
HACD3Q9P035 MIR1302-7-201ENST00000408841 72 ntBASIC0.97□□□□□ -2.25
HACD3Q9P035 UBL5P1-201ENST00000507979 193 ntBASIC0.97□□□□□ -2.25
HACD3Q9P035 MIR4251-201ENST00000635819 61 ntBASIC0.97□□□□□ -2.25
HACD3Q9P035 MIR103A2-201ENST00000362154 78 ntBASIC0.96□□□□□ -2.26
HACD3Q9P035 MIR337-201ENST00000362281 93 ntBASIC0.96□□□□□ -2.26
HACD3Q9P035 Y_RNA.292-201ENST00000364904 97 ntBASIC0.96□□□□□ -2.26
HACD3Q9P035 Y_RNA.370-201ENST00000365589 108 ntBASIC0.96□□□□□ -2.26
HACD3Q9P035 RNU6-484P-201ENST00000384016 107 ntBASIC0.96□□□□□ -2.26
HACD3Q9P035 MIR518F-201ENST00000384973 87 ntBASIC0.96□□□□□ -2.26
HACD3Q9P035 MIR616-201ENST00000385293 97 ntBASIC0.96□□□□□ -2.26
HACD3Q9P035 RNU6-381P-201ENST00000391259 108 ntBASIC0.96□□□□□ -2.26
HACD3Q9P035 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.96□□□□□ -2.26
HACD3Q9P035 AC063976.4-201ENST00000421971 163 ntBASIC0.96□□□□□ -2.26
HACD3Q9P035 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.96□□□□□ -2.26
HACD3Q9P035 SNRPGP8-201ENST00000454064 226 ntBASIC0.96□□□□□ -2.26
HACD3Q9P035 RNU2-13P-201ENST00000515909 113 ntBASIC0.96□□□□□ -2.26
HACD3Q9P035 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.96□□□□□ -2.26
HACD3Q9P035 MIR4503-201ENST00000582187 83 ntBASIC0.96□□□□□ -2.26
HACD3Q9P035 MIR4791-201ENST00000607666 84 ntBASIC0.96□□□□□ -2.26
HACD3Q9P035 U4.1-201ENST00000620349 87 ntBASIC0.96□□□□□ -2.26
HACD3Q9P035 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.26
HACD3Q9P035 AC008163.1-202ENST00000636004 2889 ntBASIC0.95□□□□□ -2.26
HACD3Q9P035 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
HACD3Q9P035 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.95□□□□□ -2.26
HACD3Q9P035 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
HACD3Q9P035 SNORA1.2-201ENST00000365189 134 ntBASIC0.95□□□□□ -2.26
HACD3Q9P035 SNORD24-201ENST00000383884 75 ntBASIC0.95□□□□□ -2.26
HACD3Q9P035 RNY3P5-201ENST00000384127 102 ntBASIC0.95□□□□□ -2.26
HACD3Q9P035 SNORD61-201ENST00000384252 73 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 221.4 ms