Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 RNU6-1138P-201ENST00000365359 106 ntBASIC1.76□□□□□ -2.13
NCKIPSDQ9NZQ3 MIR522-201ENST00000385071 87 ntBASIC1.76□□□□□ -2.13
NCKIPSDQ9NZQ3 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
NCKIPSDQ9NZQ3 RNU6-440P-201ENST00000390882 105 ntBASIC1.76□□□□□ -2.13
NCKIPSDQ9NZQ3 MTND4LP9-201ENST00000427694 174 ntBASIC1.76□□□□□ -2.13
NCKIPSDQ9NZQ3 AC008267.6-201ENST00000441664 139 ntBASIC1.76□□□□□ -2.13
NCKIPSDQ9NZQ3 AL049830.1-201ENST00000468034 425 ntBASIC1.76□□□□□ -2.13
NCKIPSDQ9NZQ3 OR9P1P-201ENST00000496431 281 ntBASIC1.76□□□□□ -2.13
NCKIPSDQ9NZQ3 RNU6-313P-201ENST00000516317 112 ntBASIC1.76□□□□□ -2.13
NCKIPSDQ9NZQ3 AC103810.8-201ENST00000607347 118 ntBASIC1.76□□□□□ -2.13
NCKIPSDQ9NZQ3 MIR8074-201ENST00000615081 81 ntBASIC1.76□□□□□ -2.13
NCKIPSDQ9NZQ3 AP001340.1-201ENST00000624405 217 ntBASIC1.76□□□□□ -2.13
NCKIPSDQ9NZQ3 WWP1P1-201ENST00000466609 2769 ntBASIC1.76□□□□□ -2.13
NCKIPSDQ9NZQ3 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.75□□□□□ -2.13
NCKIPSDQ9NZQ3 MIR378A-201ENST00000362177 66 ntBASIC1.75□□□□□ -2.13
NCKIPSDQ9NZQ3 SNORA25.7-201ENST00000364375 127 ntBASIC1.75□□□□□ -2.13
NCKIPSDQ9NZQ3 Y_RNA.420-201ENST00000384043 110 ntBASIC1.75□□□□□ -2.13
NCKIPSDQ9NZQ3 MIR9-3-201ENST00000385084 90 ntBASIC1.75□□□□□ -2.13
NCKIPSDQ9NZQ3 SNORD72-201ENST00000390994 80 ntBASIC1.75□□□□□ -2.13
NCKIPSDQ9NZQ3 RNU6-1154P-201ENST00000391001 104 ntBASIC1.75□□□□□ -2.13
NCKIPSDQ9NZQ3 AL627390.1-201ENST00000396055 340 ntBASIC1.75□□□□□ -2.13
NCKIPSDQ9NZQ3 MIR1267-201ENST00000408723 78 ntBASIC1.75□□□□□ -2.13
NCKIPSDQ9NZQ3 RN7SKP200-201ENST00000410564 320 ntBASIC1.75□□□□□ -2.13
NCKIPSDQ9NZQ3 AC108667.1-201ENST00000428618 249 ntBASIC1.75□□□□□ -2.13
NCKIPSDQ9NZQ3 STAG3L5P-204ENST00000443759 179 ntBASIC1.75□□□□□ -2.13
NCKIPSDQ9NZQ3 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.75□□□□□ -2.13
NCKIPSDQ9NZQ3 AC092991.1-201ENST00000477176 376 ntBASIC1.75□□□□□ -2.13
NCKIPSDQ9NZQ3 RPS29P11-201ENST00000496507 171 ntBASIC1.75□□□□□ -2.13
NCKIPSDQ9NZQ3 RNU6-1053P-201ENST00000515930 101 ntBASIC1.75□□□□□ -2.13
NCKIPSDQ9NZQ3 MIR4762-201ENST00000585261 75 ntBASIC1.75□□□□□ -2.13
NCKIPSDQ9NZQ3 AC097639.2-201ENST00000603159 172 ntBASIC1.75□□□□□ -2.13
NCKIPSDQ9NZQ3 snoU13.31-201ENST00000607291 104 ntBASIC1.75□□□□□ -2.13
NCKIPSDQ9NZQ3 MIRLET7C-201ENST00000362160 84 ntBASIC1.74□□□□□ -2.13
NCKIPSDQ9NZQ3 Y_RNA.91-201ENST00000363042 107 ntBASIC1.74□□□□□ -2.13
NCKIPSDQ9NZQ3 RNU6-978P-201ENST00000364371 103 ntBASIC1.74□□□□□ -2.13
NCKIPSDQ9NZQ3 U8.5-201ENST00000364528 136 ntBASIC1.74□□□□□ -2.13
NCKIPSDQ9NZQ3 SNORD48-201ENST00000364953 64 ntBASIC1.74□□□□□ -2.13
NCKIPSDQ9NZQ3 RNU6-1168P-201ENST00000390831 104 ntBASIC1.74□□□□□ -2.13
NCKIPSDQ9NZQ3 RNU2-70P-201ENST00000410718 179 ntBASIC1.74□□□□□ -2.13
NCKIPSDQ9NZQ3 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.74□□□□□ -2.13
NCKIPSDQ9NZQ3 RNA5SP272-201ENST00000516095 111 ntBASIC1.74□□□□□ -2.13
NCKIPSDQ9NZQ3 RNU7-149P-201ENST00000516739 59 ntBASIC1.74□□□□□ -2.13
NCKIPSDQ9NZQ3 Y_RNA.714-201ENST00000517065 90 ntBASIC1.74□□□□□ -2.13
NCKIPSDQ9NZQ3 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.74□□□□□ -2.13
NCKIPSDQ9NZQ3 AC008507.4-201ENST00000585464 127 ntBASIC1.74□□□□□ -2.13
NCKIPSDQ9NZQ3 AC087685.1-201ENST00000587507 141 ntBASIC1.74□□□□□ -2.13
NCKIPSDQ9NZQ3 AC120024.3-201ENST00000603167 156 ntBASIC1.74□□□□□ -2.13
NCKIPSDQ9NZQ3 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.74□□□□□ -2.13
NCKIPSDQ9NZQ3 SNORD68-201ENST00000363214 84 ntBASIC1.73□□□□□ -2.13
NCKIPSDQ9NZQ3 Y_RNA.634-201ENST00000364811 113 ntBASIC1.73□□□□□ -2.13
NCKIPSDQ9NZQ3 MIR30A-201ENST00000385092 71 ntBASIC1.73□□□□□ -2.13
NCKIPSDQ9NZQ3 RNU6-588P-201ENST00000410281 105 ntBASIC1.73□□□□□ -2.13
NCKIPSDQ9NZQ3 MTATP6P29-201ENST00000415057 132 ntBASIC1.73□□□□□ -2.13
NCKIPSDQ9NZQ3 AC099513.1-201ENST00000490423 301 ntBASIC1.73□□□□□ -2.13
NCKIPSDQ9NZQ3 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.73□□□□□ -2.13
NCKIPSDQ9NZQ3 AC090142.3-201ENST00000519012 385 ntBASIC1.73□□□□□ -2.13
NCKIPSDQ9NZQ3 Pinc.1-201ENST00000616452 154 ntBASIC1.73□□□□□ -2.13
NCKIPSDQ9NZQ3 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
NCKIPSDQ9NZQ3 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
NCKIPSDQ9NZQ3 Y_RNA.251-201ENST00000364551 99 ntBASIC1.72□□□□□ -2.13
NCKIPSDQ9NZQ3 Y_RNA.265-201ENST00000364677 108 ntBASIC1.72□□□□□ -2.13
NCKIPSDQ9NZQ3 SNORD50B-201ENST00000364995 70 ntBASIC1.72□□□□□ -2.13
NCKIPSDQ9NZQ3 Y_RNA.486-201ENST00000384398 107 ntBASIC1.72□□□□□ -2.13
NCKIPSDQ9NZQ3 Y_RNA.542-201ENST00000384641 111 ntBASIC1.72□□□□□ -2.13
NCKIPSDQ9NZQ3 MLLT10P1-201ENST00000418346 262 ntBASIC1.72□□□□□ -2.13
NCKIPSDQ9NZQ3 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.72□□□□□ -2.13
NCKIPSDQ9NZQ3 CALM2P4-201ENST00000430810 426 ntBASIC1.72□□□□□ -2.13
NCKIPSDQ9NZQ3 JTBP1-201ENST00000441314 247 ntBASIC1.72□□□□□ -2.13
NCKIPSDQ9NZQ3 SNORD13-201ENST00000459299 104 ntBASIC1.72□□□□□ -2.13
NCKIPSDQ9NZQ3 RNU6-1116P-201ENST00000517269 99 ntBASIC1.72□□□□□ -2.13
NCKIPSDQ9NZQ3 AP001328.1-201ENST00000528550 176 ntBASIC1.72□□□□□ -2.13
NCKIPSDQ9NZQ3 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.72□□□□□ -2.13
NCKIPSDQ9NZQ3 U7.2-201ENST00000607576 63 ntBASIC1.72□□□□□ -2.13
NCKIPSDQ9NZQ3 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.72□□□□□ -2.13
NCKIPSDQ9NZQ3 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.13
NCKIPSDQ9NZQ3 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
NCKIPSDQ9NZQ3 MIR337-201ENST00000362281 93 ntBASIC1.71□□□□□ -2.14
NCKIPSDQ9NZQ3 Y_RNA.127-201ENST00000363386 109 ntBASIC1.71□□□□□ -2.14
NCKIPSDQ9NZQ3 RNU6-1082P-201ENST00000364574 107 ntBASIC1.71□□□□□ -2.14
NCKIPSDQ9NZQ3 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
NCKIPSDQ9NZQ3 Y_RNA.584-201ENST00000391090 114 ntBASIC1.71□□□□□ -2.14
NCKIPSDQ9NZQ3 RNA5SP482-201ENST00000391269 118 ntBASIC1.71□□□□□ -2.14
NCKIPSDQ9NZQ3 AL034345.1-201ENST00000407768 123 ntBASIC1.71□□□□□ -2.14
NCKIPSDQ9NZQ3 RNU6-365P-201ENST00000517113 106 ntBASIC1.71□□□□□ -2.14
NCKIPSDQ9NZQ3 AL365222.1-201ENST00000614661 98 ntBASIC1.71□□□□□ -2.14
NCKIPSDQ9NZQ3 Y_RNA.66-201ENST00000362862 102 ntBASIC1.7□□□□□ -2.14
NCKIPSDQ9NZQ3 Y_RNA.71-201ENST00000362892 104 ntBASIC1.7□□□□□ -2.14
NCKIPSDQ9NZQ3 RNA5SP205-201ENST00000364653 136 ntBASIC1.7□□□□□ -2.14
NCKIPSDQ9NZQ3 SNORD116-14-201ENST00000383894 92 ntBASIC1.7□□□□□ -2.14
NCKIPSDQ9NZQ3 SNORD116-17-201ENST00000383929 92 ntBASIC1.7□□□□□ -2.14
NCKIPSDQ9NZQ3 RNU6-80P-201ENST00000384195 107 ntBASIC1.7□□□□□ -2.14
NCKIPSDQ9NZQ3 SNORD116-15-201ENST00000384445 92 ntBASIC1.7□□□□□ -2.14
NCKIPSDQ9NZQ3 SNORA22C-201ENST00000384614 134 ntBASIC1.7□□□□□ -2.14
NCKIPSDQ9NZQ3 SNORA20-201ENST00000384662 132 ntBASIC1.7□□□□□ -2.14
NCKIPSDQ9NZQ3 SNORD116-19-201ENST00000384729 92 ntBASIC1.7□□□□□ -2.14
NCKIPSDQ9NZQ3 RNU6-1031P-201ENST00000384773 107 ntBASIC1.7□□□□□ -2.14
NCKIPSDQ9NZQ3 RNU6-460P-201ENST00000391158 108 ntBASIC1.7□□□□□ -2.14
NCKIPSDQ9NZQ3 U8.16-201ENST00000391279 133 ntBASIC1.7□□□□□ -2.14
NCKIPSDQ9NZQ3 Y_RNA.629-201ENST00000411368 105 ntBASIC1.7□□□□□ -2.14
NCKIPSDQ9NZQ3 SNRPGP14-201ENST00000435400 219 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms