Protein–RNA interactions for Protein: Q9NXE4

SMPD4, Sphingomyelin phosphodiesterase 4, humanhuman

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4Q9NXE4 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
SMPD4Q9NXE4 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.39□□□□□ -2.03
SMPD4Q9NXE4 RNU6-268P-201ENST00000364174 107 ntBASIC2.39□□□□□ -2.03
SMPD4Q9NXE4 RNU4-36P-201ENST00000364294 144 ntBASIC2.39□□□□□ -2.03
SMPD4Q9NXE4 RNU4-16P-201ENST00000364737 141 ntBASIC2.39□□□□□ -2.03
SMPD4Q9NXE4 RNU1-133P-201ENST00000364867 167 ntBASIC2.39□□□□□ -2.03
SMPD4Q9NXE4 RNU6-497P-201ENST00000365316 104 ntBASIC2.39□□□□□ -2.03
SMPD4Q9NXE4 SNORA31.4-201ENST00000516049 129 ntBASIC2.39□□□□□ -2.03
SMPD4Q9NXE4 U7.3-201ENST00000616123 62 ntBASIC2.39□□□□□ -2.03
SMPD4Q9NXE4 AC080100.1-201ENST00000624239 5356 ntBASIC2.38□□□□□ -2.03
SMPD4Q9NXE4 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
SMPD4Q9NXE4 Y_RNA.531-201ENST00000384589 121 ntBASIC2.38□□□□□ -2.03
SMPD4Q9NXE4 MIR218-1-201ENST00000384999 110 ntBASIC2.38□□□□□ -2.03
SMPD4Q9NXE4 MIR1912-201ENST00000410389 80 ntBASIC2.38□□□□□ -2.03
SMPD4Q9NXE4 RN7SKP192-201ENST00000411291 327 ntBASIC2.38□□□□□ -2.03
SMPD4Q9NXE4 AL356320.1-201ENST00000429616 163 ntBASIC2.38□□□□□ -2.03
SMPD4Q9NXE4 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SMPD4Q9NXE4 RPL39P39-201ENST00000455840 151 ntBASIC2.38□□□□□ -2.03
SMPD4Q9NXE4 RNU1-131P-201ENST00000458943 161 ntBASIC2.38□□□□□ -2.03
SMPD4Q9NXE4 RNU6-1041P-201ENST00000516254 102 ntBASIC2.38□□□□□ -2.03
SMPD4Q9NXE4 AL358944.1-201ENST00000528537 144 ntBASIC2.38□□□□□ -2.03
SMPD4Q9NXE4 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.38□□□□□ -2.03
SMPD4Q9NXE4 AC007336.1-201ENST00000576365 3828 ntBASIC2.38□□□□□ -2.03
SMPD4Q9NXE4 MIR3618-201ENST00000580330 88 ntBASIC2.38□□□□□ -2.03
SMPD4Q9NXE4 AL356280.1-201ENST00000603614 379 ntBASIC2.38□□□□□ -2.03
SMPD4Q9NXE4 Y_RNA.773-201ENST00000607168 90 ntBASIC2.38□□□□□ -2.03
SMPD4Q9NXE4 AC091932.4-201ENST00000623386 200 ntBASIC2.38□□□□□ -2.03
SMPD4Q9NXE4 MIR338-201ENST00000636369 67 ntBASIC2.38□□□□□ -2.03
SMPD4Q9NXE4 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.38□□□□□ -2.03
SMPD4Q9NXE4 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SMPD4Q9NXE4 RNU6-1125P-201ENST00000363601 107 ntBASIC2.37□□□□□ -2.03
SMPD4Q9NXE4 Y_RNA.244-201ENST00000364484 109 ntBASIC2.37□□□□□ -2.03
SMPD4Q9NXE4 Y_RNA.351-201ENST00000365436 96 ntBASIC2.37□□□□□ -2.03
SMPD4Q9NXE4 MIR577-201ENST00000385196 96 ntBASIC2.37□□□□□ -2.03
SMPD4Q9NXE4 Y_RNA.601-201ENST00000410500 113 ntBASIC2.37□□□□□ -2.03
SMPD4Q9NXE4 AL445646.1-201ENST00000431784 216 ntBASIC2.37□□□□□ -2.03
SMPD4Q9NXE4 AL353813.1-201ENST00000440700 253 ntBASIC2.37□□□□□ -2.03
SMPD4Q9NXE4 MIR1273D-201ENST00000577266 86 ntBASIC2.37□□□□□ -2.03
SMPD4Q9NXE4 MIR4648-201ENST00000580107 72 ntBASIC2.37□□□□□ -2.03
SMPD4Q9NXE4 MIR5007-201ENST00000583098 95 ntBASIC2.37□□□□□ -2.03
SMPD4Q9NXE4 AL513534.2-201ENST00000603836 250 ntBASIC2.37□□□□□ -2.03
SMPD4Q9NXE4 AL359075.3-201ENST00000613288 217 ntBASIC2.37□□□□□ -2.03
SMPD4Q9NXE4 AC095038.3-201ENST00000634439 195 ntBASIC2.37□□□□□ -2.03
SMPD4Q9NXE4 MIR3202-2-201ENST00000635980 79 ntBASIC2.37□□□□□ -2.03
SMPD4Q9NXE4 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
SMPD4Q9NXE4 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
SMPD4Q9NXE4 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
SMPD4Q9NXE4 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SMPD4Q9NXE4 SNORD68-201ENST00000363214 84 ntBASIC2.36□□□□□ -2.03
SMPD4Q9NXE4 RNY1P1-201ENST00000364372 112 ntBASIC2.36□□□□□ -2.03
SMPD4Q9NXE4 RNU6-1276P-201ENST00000365372 104 ntBASIC2.36□□□□□ -2.03
SMPD4Q9NXE4 RNU6-1072P-201ENST00000384703 107 ntBASIC2.36□□□□□ -2.03
SMPD4Q9NXE4 RNU6-443P-201ENST00000384780 107 ntBASIC2.36□□□□□ -2.03
SMPD4Q9NXE4 MIR221-201ENST00000385135 110 ntBASIC2.36□□□□□ -2.03
SMPD4Q9NXE4 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
SMPD4Q9NXE4 AC004941.2-201ENST00000427009 228 ntBASIC2.36□□□□□ -2.03
SMPD4Q9NXE4 AL049830.1-201ENST00000468034 425 ntBASIC2.36□□□□□ -2.03
SMPD4Q9NXE4 RNU7-70P-201ENST00000516941 66 ntBASIC2.36□□□□□ -2.03
SMPD4Q9NXE4 AP003484.1-201ENST00000530974 250 ntBASIC2.36□□□□□ -2.03
SMPD4Q9NXE4 MIR4446-201ENST00000578505 67 ntBASIC2.36□□□□□ -2.03
SMPD4Q9NXE4 MIR3683-201ENST00000580847 82 ntBASIC2.36□□□□□ -2.03
SMPD4Q9NXE4 MIR4762-201ENST00000585261 75 ntBASIC2.36□□□□□ -2.03
SMPD4Q9NXE4 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.36□□□□□ -2.03
SMPD4Q9NXE4 AC091304.10-201ENST00000641554 121 ntBASIC2.36□□□□□ -2.03
SMPD4Q9NXE4 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SMPD4Q9NXE4 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SMPD4Q9NXE4 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
SMPD4Q9NXE4 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SMPD4Q9NXE4 RNU6-170P-201ENST00000362832 104 ntBASIC2.35□□□□□ -2.03
SMPD4Q9NXE4 Y_RNA.242-201ENST00000364473 110 ntBASIC2.35□□□□□ -2.03
SMPD4Q9NXE4 SNORA4.2-201ENST00000365313 147 ntBASIC2.35□□□□□ -2.03
SMPD4Q9NXE4 RNU6-442P-201ENST00000383968 104 ntBASIC2.35□□□□□ -2.03
SMPD4Q9NXE4 RNU6-675P-201ENST00000384236 104 ntBASIC2.35□□□□□ -2.03
SMPD4Q9NXE4 MIR95-201ENST00000385072 81 ntBASIC2.35□□□□□ -2.03
SMPD4Q9NXE4 MIR605-201ENST00000385078 83 ntBASIC2.35□□□□□ -2.03
SMPD4Q9NXE4 MIR802-201ENST00000390235 94 ntBASIC2.35□□□□□ -2.03
SMPD4Q9NXE4 BTF3P4-201ENST00000418852 495 ntBASIC2.35□□□□□ -2.03
SMPD4Q9NXE4 AC099677.2-201ENST00000436385 175 ntBASIC2.35□□□□□ -2.03
SMPD4Q9NXE4 RNU6-521P-201ENST00000516663 105 ntBASIC2.35□□□□□ -2.03
SMPD4Q9NXE4 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.35□□□□□ -2.03
SMPD4Q9NXE4 AC104984.5-201ENST00000586878 94 ntBASIC2.35□□□□□ -2.03
SMPD4Q9NXE4 RNU6-832P-201ENST00000363319 107 ntBASIC2.34□□□□□ -2.03
SMPD4Q9NXE4 SNORD14E-201ENST00000364009 85 ntBASIC2.34□□□□□ -2.03
SMPD4Q9NXE4 SNORD114-6-201ENST00000364393 72 ntBASIC2.34□□□□□ -2.03
SMPD4Q9NXE4 U8.5-201ENST00000364528 136 ntBASIC2.34□□□□□ -2.03
SMPD4Q9NXE4 Y_RNA.360-201ENST00000365512 102 ntBASIC2.34□□□□□ -2.03
SMPD4Q9NXE4 RNU6-220P-201ENST00000390919 107 ntBASIC2.34□□□□□ -2.03
SMPD4Q9NXE4 AC096949.1-201ENST00000412047 152 ntBASIC2.34□□□□□ -2.03
SMPD4Q9NXE4 AL512326.2-201ENST00000426359 151 ntBASIC2.34□□□□□ -2.03
SMPD4Q9NXE4 MICF-203ENST00000432679 129 ntBASIC2.34□□□□□ -2.03
SMPD4Q9NXE4 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.34□□□□□ -2.03
SMPD4Q9NXE4 RNU6-267P-201ENST00000516714 103 ntBASIC2.34□□□□□ -2.03
SMPD4Q9NXE4 SNORA18.7-201ENST00000516910 131 ntBASIC2.34□□□□□ -2.03
SMPD4Q9NXE4 Y_RNA.714-201ENST00000517065 90 ntBASIC2.34□□□□□ -2.03
SMPD4Q9NXE4 AP002004.2-201ENST00000531656 154 ntBASIC2.34□□□□□ -2.03
SMPD4Q9NXE4 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.34□□□□□ -2.03
SMPD4Q9NXE4 MIR4694-201ENST00000578534 80 ntBASIC2.34□□□□□ -2.03
SMPD4Q9NXE4 MIR3199-1-201ENST00000582434 88 ntBASIC2.34□□□□□ -2.03
SMPD4Q9NXE4 MIR4777-201ENST00000583710 86 ntBASIC2.34□□□□□ -2.03
SMPD4Q9NXE4 IGLL4P-201ENST00000614590 133 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 322.1 ms