Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 RNU7-149P-201ENST00000516739 59 ntBASIC1.46□□□□□ -2.18
DDX4Q9NQI0 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.46□□□□□ -2.18
DDX4Q9NQI0 AC090049.2-201ENST00000550377 109 ntBASIC1.46□□□□□ -2.18
DDX4Q9NQI0 MIR3937-201ENST00000580135 106 ntBASIC1.46□□□□□ -2.18
DDX4Q9NQI0 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
DDX4Q9NQI0 Y_RNA.83-201ENST00000363005 113 ntBASIC1.45□□□□□ -2.18
DDX4Q9NQI0 SNORD114-27-201ENST00000363766 70 ntBASIC1.45□□□□□ -2.18
DDX4Q9NQI0 Y_RNA.308-201ENST00000365043 101 ntBASIC1.45□□□□□ -2.18
DDX4Q9NQI0 AL451046.2-201ENST00000403074 277 ntBASIC1.45□□□□□ -2.18
DDX4Q9NQI0 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.45□□□□□ -2.18
DDX4Q9NQI0 AC092991.1-201ENST00000477176 376 ntBASIC1.45□□□□□ -2.18
DDX4Q9NQI0 RPL30P7-201ENST00000479312 323 ntBASIC1.45□□□□□ -2.18
DDX4Q9NQI0 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
DDX4Q9NQI0 MIR4452-201ENST00000583004 71 ntBASIC1.45□□□□□ -2.18
DDX4Q9NQI0 AC006441.5-201ENST00000612680 209 ntBASIC1.45□□□□□ -2.18
DDX4Q9NQI0 AC106754.2-201ENST00000623006 233 ntBASIC1.45□□□□□ -2.18
DDX4Q9NQI0 MIR411-201ENST00000362239 96 ntBASIC1.44□□□□□ -2.18
DDX4Q9NQI0 Y_RNA.121-201ENST00000363309 113 ntBASIC1.44□□□□□ -2.18
DDX4Q9NQI0 Y_RNA.191-201ENST00000363972 113 ntBASIC1.44□□□□□ -2.18
DDX4Q9NQI0 snoU2_19.4-201ENST00000364329 80 ntBASIC1.44□□□□□ -2.18
DDX4Q9NQI0 MIR136-201ENST00000385207 82 ntBASIC1.44□□□□□ -2.18
DDX4Q9NQI0 Y_RNA.587-201ENST00000391210 103 ntBASIC1.44□□□□□ -2.18
DDX4Q9NQI0 AC015922.2-201ENST00000435593 184 ntBASIC1.44□□□□□ -2.18
DDX4Q9NQI0 AC245047.8-201ENST00000456455 284 ntBASIC1.44□□□□□ -2.18
DDX4Q9NQI0 AL357312.1-201ENST00000603879 298 ntBASIC1.44□□□□□ -2.18
DDX4Q9NQI0 AL365434.2-201ENST00000607979 234 ntBASIC1.44□□□□□ -2.18
DDX4Q9NQI0 Pinc.1-201ENST00000616452 154 ntBASIC1.44□□□□□ -2.18
DDX4Q9NQI0 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
DDX4Q9NQI0 MIR6767-201ENST00000637302 66 ntBASIC1.44□□□□□ -2.18
DDX4Q9NQI0 AL442644.1-201ENST00000454390 3105 ntBASIC1.43□□□□□ -2.18
DDX4Q9NQI0 Y_RNA.7-201ENST00000362352 102 ntBASIC1.43□□□□□ -2.18
DDX4Q9NQI0 RNU1-93P-201ENST00000364704 169 ntBASIC1.43□□□□□ -2.18
DDX4Q9NQI0 Y_RNA.572-201ENST00000384757 98 ntBASIC1.43□□□□□ -2.18
DDX4Q9NQI0 SNORD72-201ENST00000390994 80 ntBASIC1.43□□□□□ -2.18
DDX4Q9NQI0 AL606845.1-201ENST00000404881 255 ntBASIC1.43□□□□□ -2.18
DDX4Q9NQI0 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.43□□□□□ -2.18
DDX4Q9NQI0 RNU6-917P-201ENST00000516294 104 ntBASIC1.43□□□□□ -2.18
DDX4Q9NQI0 RNU6-388P-201ENST00000517012 105 ntBASIC1.43□□□□□ -2.18
DDX4Q9NQI0 RNU6-389P-201ENST00000517048 105 ntBASIC1.43□□□□□ -2.18
DDX4Q9NQI0 AC019176.1-201ENST00000518519 225 ntBASIC1.43□□□□□ -2.18
DDX4Q9NQI0 Y_RNA.118-201ENST00000363300 101 ntBASIC1.42□□□□□ -2.18
DDX4Q9NQI0 SNORA25.8-201ENST00000364831 128 ntBASIC1.42□□□□□ -2.18
DDX4Q9NQI0 RNU6-728P-201ENST00000365375 104 ntBASIC1.42□□□□□ -2.18
DDX4Q9NQI0 Y_RNA.435-201ENST00000384095 112 ntBASIC1.42□□□□□ -2.18
DDX4Q9NQI0 MIR526A1-201ENST00000384897 85 ntBASIC1.42□□□□□ -2.18
DDX4Q9NQI0 SNRPGP14-201ENST00000435400 219 ntBASIC1.42□□□□□ -2.18
DDX4Q9NQI0 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.42□□□□□ -2.18
DDX4Q9NQI0 RNU6-1299P-201ENST00000516316 100 ntBASIC1.42□□□□□ -2.18
DDX4Q9NQI0 Y_RNA.700-201ENST00000516806 100 ntBASIC1.42□□□□□ -2.18
DDX4Q9NQI0 RNU6-902P-201ENST00000517212 91 ntBASIC1.42□□□□□ -2.18
DDX4Q9NQI0 AC090142.3-201ENST00000519012 385 ntBASIC1.42□□□□□ -2.18
DDX4Q9NQI0 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.42□□□□□ -2.18
DDX4Q9NQI0 GHRLOS.1-201ENST00000610995 70 ntBASIC1.42□□□□□ -2.18
DDX4Q9NQI0 RNU6-268P-201ENST00000364174 107 ntBASIC1.41□□□□□ -2.18
DDX4Q9NQI0 Y_RNA.257-201ENST00000364596 102 ntBASIC1.41□□□□□ -2.18
DDX4Q9NQI0 Y_RNA.432-201ENST00000384087 111 ntBASIC1.41□□□□□ -2.18
DDX4Q9NQI0 MIR150-201ENST00000385048 84 ntBASIC1.41□□□□□ -2.18
DDX4Q9NQI0 MIR518E-201ENST00000385252 88 ntBASIC1.41□□□□□ -2.18
DDX4Q9NQI0 RNU6-493P-201ENST00000391321 108 ntBASIC1.41□□□□□ -2.18
DDX4Q9NQI0 SNORA79-201ENST00000408376 140 ntBASIC1.41□□□□□ -2.18
DDX4Q9NQI0 RNU6-830P-201ENST00000516353 107 ntBASIC1.41□□□□□ -2.18
DDX4Q9NQI0 RNA5SP153-201ENST00000516498 76 ntBASIC1.41□□□□□ -2.18
DDX4Q9NQI0 AC130289.1-201ENST00000577321 73 ntBASIC1.41□□□□□ -2.18
DDX4Q9NQI0 MIR4744-201ENST00000581563 82 ntBASIC1.41□□□□□ -2.18
DDX4Q9NQI0 SNORA4-201ENST00000584302 138 ntBASIC1.41□□□□□ -2.18
DDX4Q9NQI0 FAM106DP-201ENST00000586416 501 ntBASIC1.41□□□□□ -2.18
DDX4Q9NQI0 AC078938.1-201ENST00000620993 318 ntBASIC1.41□□□□□ -2.18
DDX4Q9NQI0 RNU6-1020P-201ENST00000363684 107 ntBASIC1.4□□□□□ -2.19
DDX4Q9NQI0 RNU4-70P-201ENST00000384579 139 ntBASIC1.4□□□□□ -2.19
DDX4Q9NQI0 MIR489-201ENST00000384923 84 ntBASIC1.4□□□□□ -2.19
DDX4Q9NQI0 MT-TT-201ENST00000387460 66 ntBASIC1.4□□□□□ -2.19
DDX4Q9NQI0 SCARNA8-201ENST00000515924 131 ntBASIC1.4□□□□□ -2.19
DDX4Q9NQI0 RNY3P16-201ENST00000516338 101 ntBASIC1.4□□□□□ -2.19
DDX4Q9NQI0 RNU6-453P-201ENST00000516819 85 ntBASIC1.4□□□□□ -2.19
DDX4Q9NQI0 RNU6-365P-201ENST00000517113 106 ntBASIC1.4□□□□□ -2.19
DDX4Q9NQI0 AC090821.2-201ENST00000523552 176 ntBASIC1.4□□□□□ -2.19
DDX4Q9NQI0 AC019288.1-201ENST00000557918 224 ntBASIC1.4□□□□□ -2.19
DDX4Q9NQI0 RNU6-200P-201ENST00000364743 107 ntBASIC1.39□□□□□ -2.19
DDX4Q9NQI0 RNU6-923P-201ENST00000364753 107 ntBASIC1.39□□□□□ -2.19
DDX4Q9NQI0 RNU6-484P-201ENST00000384016 107 ntBASIC1.39□□□□□ -2.19
DDX4Q9NQI0 Y_RNA.571-201ENST00000384753 98 ntBASIC1.39□□□□□ -2.19
DDX4Q9NQI0 MIR516B2-201ENST00000385190 85 ntBASIC1.39□□□□□ -2.19
DDX4Q9NQI0 RNU2-70P-201ENST00000410718 179 ntBASIC1.39□□□□□ -2.19
DDX4Q9NQI0 RPS27P16-201ENST00000425758 201 ntBASIC1.39□□□□□ -2.19
DDX4Q9NQI0 AL138752.1-201ENST00000452964 351 ntBASIC1.39□□□□□ -2.19
DDX4Q9NQI0 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.39□□□□□ -2.19
DDX4Q9NQI0 RNU6-922P-201ENST00000516753 99 ntBASIC1.39□□□□□ -2.19
DDX4Q9NQI0 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.39□□□□□ -2.19
DDX4Q9NQI0 MIR4308-201ENST00000580634 81 ntBASIC1.39□□□□□ -2.19
DDX4Q9NQI0 AC097639.2-201ENST00000603159 172 ntBASIC1.39□□□□□ -2.19
DDX4Q9NQI0 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
DDX4Q9NQI0 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
DDX4Q9NQI0 SNORD45.3-201ENST00000363836 72 ntBASIC1.38□□□□□ -2.19
DDX4Q9NQI0 Y_RNA.297-201ENST00000364950 91 ntBASIC1.38□□□□□ -2.19
DDX4Q9NQI0 SNORD24-201ENST00000383884 75 ntBASIC1.38□□□□□ -2.19
DDX4Q9NQI0 RNU6-939P-201ENST00000384634 107 ntBASIC1.38□□□□□ -2.19
DDX4Q9NQI0 SNORD41-201ENST00000386967 70 ntBASIC1.38□□□□□ -2.19
DDX4Q9NQI0 RNU6-955P-201ENST00000410497 104 ntBASIC1.38□□□□□ -2.19
DDX4Q9NQI0 RNU4-43P-201ENST00000410628 137 ntBASIC1.38□□□□□ -2.19
DDX4Q9NQI0 Y_RNA.797-201ENST00000515977 94 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms