Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 RNU6-1219P-201ENST00000516143 112 ntBASIC1.64□□□□□ -2.15
HIPK3Q9H422 RNU6-970P-201ENST00000516312 107 ntBASIC1.64□□□□□ -2.15
HIPK3Q9H422 AC109810.1-201ENST00000534066 224 ntBASIC1.64□□□□□ -2.15
HIPK3Q9H422 MIR4778-201ENST00000577635 80 ntBASIC1.64□□□□□ -2.15
HIPK3Q9H422 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.64□□□□□ -2.15
HIPK3Q9H422 Y_RNA.75-201ENST00000362927 97 ntBASIC1.63□□□□□ -2.15
HIPK3Q9H422 SNORD45.3-201ENST00000363836 72 ntBASIC1.63□□□□□ -2.15
HIPK3Q9H422 RNU6-682P-201ENST00000363843 106 ntBASIC1.63□□□□□ -2.15
HIPK3Q9H422 SNORD14E-201ENST00000364009 85 ntBASIC1.63□□□□□ -2.15
HIPK3Q9H422 Y_RNA.242-201ENST00000364473 110 ntBASIC1.63□□□□□ -2.15
HIPK3Q9H422 RNU6-275P-201ENST00000364910 107 ntBASIC1.63□□□□□ -2.15
HIPK3Q9H422 Y_RNA.336-201ENST00000365307 109 ntBASIC1.63□□□□□ -2.15
HIPK3Q9H422 RNU6-728P-201ENST00000365375 104 ntBASIC1.63□□□□□ -2.15
HIPK3Q9H422 Y_RNA.412-201ENST00000384001 104 ntBASIC1.63□□□□□ -2.15
HIPK3Q9H422 RNU6-484P-201ENST00000384016 107 ntBASIC1.63□□□□□ -2.15
HIPK3Q9H422 HMGN2P32-201ENST00000444648 269 ntBASIC1.63□□□□□ -2.15
HIPK3Q9H422 RNU6-861P-201ENST00000516745 106 ntBASIC1.63□□□□□ -2.15
HIPK3Q9H422 MIR4662B-201ENST00000579498 81 ntBASIC1.63□□□□□ -2.15
HIPK3Q9H422 U6.106-201ENST00000636360 105 ntBASIC1.63□□□□□ -2.15
HIPK3Q9H422 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.63□□□□□ -2.15
HIPK3Q9H422 RNU6-442P-201ENST00000383968 104 ntBASIC1.62□□□□□ -2.15
HIPK3Q9H422 RNU6-42P-201ENST00000384165 107 ntBASIC1.62□□□□□ -2.15
HIPK3Q9H422 Y_RNA.486-201ENST00000384398 107 ntBASIC1.62□□□□□ -2.15
HIPK3Q9H422 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.62□□□□□ -2.15
HIPK3Q9H422 RNU6-1299P-201ENST00000516316 100 ntBASIC1.62□□□□□ -2.15
HIPK3Q9H422 SUMO2P16-201ENST00000519475 264 ntBASIC1.62□□□□□ -2.15
HIPK3Q9H422 MRPS18CP4-201ENST00000535821 231 ntBASIC1.62□□□□□ -2.15
HIPK3Q9H422 AL078603.1-201ENST00000603824 313 ntBASIC1.62□□□□□ -2.15
HIPK3Q9H422 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.62□□□□□ -2.15
HIPK3Q9H422 RNU6-53P-201ENST00000365367 106 ntBASIC1.61□□□□□ -2.15
HIPK3Q9H422 Y_RNA.432-201ENST00000384087 111 ntBASIC1.61□□□□□ -2.15
HIPK3Q9H422 RNU6-997P-201ENST00000384725 107 ntBASIC1.61□□□□□ -2.15
HIPK3Q9H422 MIR15B-201ENST00000385045 98 ntBASIC1.61□□□□□ -2.15
HIPK3Q9H422 MIR802-201ENST00000390235 94 ntBASIC1.61□□□□□ -2.15
HIPK3Q9H422 RNU4-43P-201ENST00000410628 137 ntBASIC1.61□□□□□ -2.15
HIPK3Q9H422 SNRPGP14-201ENST00000435400 219 ntBASIC1.61□□□□□ -2.15
HIPK3Q9H422 AL121914.1-201ENST00000450188 156 ntBASIC1.61□□□□□ -2.15
HIPK3Q9H422 RNU6-126P-201ENST00000516685 103 ntBASIC1.61□□□□□ -2.15
HIPK3Q9H422 MIR6078-201ENST00000611069 100 ntBASIC1.61□□□□□ -2.15
HIPK3Q9H422 FTX_2.1-201ENST00000618816 94 ntBASIC1.61□□□□□ -2.15
HIPK3Q9H422 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.61□□□□□ -2.15
HIPK3Q9H422 Y_RNA.240-201ENST00000364469 95 ntBASIC1.6□□□□□ -2.15
HIPK3Q9H422 RNU6-312P-201ENST00000364629 107 ntBASIC1.6□□□□□ -2.15
HIPK3Q9H422 MIR513A1-201ENST00000385138 129 ntBASIC1.6□□□□□ -2.15
HIPK3Q9H422 RN7SKP51-201ENST00000410781 304 ntBASIC1.6□□□□□ -2.15
HIPK3Q9H422 AC005908.1-201ENST00000468701 347 ntBASIC1.6□□□□□ -2.15
HIPK3Q9H422 RNA5SP153-201ENST00000516498 76 ntBASIC1.6□□□□□ -2.15
HIPK3Q9H422 AC015688.6-201ENST00000577737 104 ntBASIC1.6□□□□□ -2.15
HIPK3Q9H422 AC098479.1-201ENST00000609225 154 ntBASIC1.6□□□□□ -2.15
HIPK3Q9H422 AC006441.5-201ENST00000612680 209 ntBASIC1.6□□□□□ -2.15
HIPK3Q9H422 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
HIPK3Q9H422 Y_RNA.23-201ENST00000362496 106 ntBASIC1.59□□□□□ -2.15
HIPK3Q9H422 RNU6-199P-201ENST00000362954 107 ntBASIC1.59□□□□□ -2.15
HIPK3Q9H422 RNU6-268P-201ENST00000364174 107 ntBASIC1.59□□□□□ -2.15
HIPK3Q9H422 SNORD114-22-201ENST00000365423 72 ntBASIC1.59□□□□□ -2.15
HIPK3Q9H422 RNA5SP259-201ENST00000365541 109 ntBASIC1.59□□□□□ -2.15
HIPK3Q9H422 MIR1304-201ENST00000408243 91 ntBASIC1.59□□□□□ -2.15
HIPK3Q9H422 snoU13.9-201ENST00000458927 103 ntBASIC1.59□□□□□ -2.15
HIPK3Q9H422 RNA5SP220-201ENST00000516298 104 ntBASIC1.59□□□□□ -2.15
HIPK3Q9H422 AL160236.1-201ENST00000556317 195 ntBASIC1.59□□□□□ -2.15
HIPK3Q9H422 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.59□□□□□ -2.15
HIPK3Q9H422 RMST_2.1-201ENST00000617263 136 ntBASIC1.59□□□□□ -2.15
HIPK3Q9H422 AL442644.1-201ENST00000454390 3105 ntBASIC1.58□□□□□ -2.16
HIPK3Q9H422 ICE2P2-201ENST00000483823 2787 ntBASIC1.58□□□□□ -2.16
HIPK3Q9H422 Y_RNA.91-201ENST00000363042 107 ntBASIC1.58□□□□□ -2.16
HIPK3Q9H422 Y_RNA.634-201ENST00000364811 113 ntBASIC1.58□□□□□ -2.16
HIPK3Q9H422 SNORA26-201ENST00000391286 122 ntBASIC1.58□□□□□ -2.16
HIPK3Q9H422 RNU2-70P-201ENST00000410718 179 ntBASIC1.58□□□□□ -2.16
HIPK3Q9H422 AC015922.2-201ENST00000435593 184 ntBASIC1.58□□□□□ -2.16
HIPK3Q9H422 Y_RNA.662-201ENST00000516028 97 ntBASIC1.58□□□□□ -2.16
HIPK3Q9H422 RNU6-197P-201ENST00000516680 100 ntBASIC1.58□□□□□ -2.16
HIPK3Q9H422 RNU6-365P-201ENST00000517113 106 ntBASIC1.58□□□□□ -2.16
HIPK3Q9H422 MIR6734-201ENST00000621166 68 ntBASIC1.58□□□□□ -2.16
HIPK3Q9H422 AC106754.2-201ENST00000623006 233 ntBASIC1.58□□□□□ -2.16
HIPK3Q9H422 Y_RNA.150-201ENST00000363562 102 ntBASIC1.57□□□□□ -2.16
HIPK3Q9H422 MIR526A1-201ENST00000384897 85 ntBASIC1.57□□□□□ -2.16
HIPK3Q9H422 MIR452-201ENST00000385020 85 ntBASIC1.57□□□□□ -2.16
HIPK3Q9H422 SNORA79-201ENST00000408376 140 ntBASIC1.57□□□□□ -2.16
HIPK3Q9H422 Y_RNA.666-201ENST00000516187 112 ntBASIC1.57□□□□□ -2.16
HIPK3Q9H422 AC090142.3-201ENST00000519012 385 ntBASIC1.57□□□□□ -2.16
HIPK3Q9H422 MIR4431-201ENST00000579990 94 ntBASIC1.57□□□□□ -2.16
HIPK3Q9H422 AC097639.2-201ENST00000603159 172 ntBASIC1.57□□□□□ -2.16
HIPK3Q9H422 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.57□□□□□ -2.16
HIPK3Q9H422 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
HIPK3Q9H422 MIR302D-201ENST00000362275 68 ntBASIC1.56□□□□□ -2.16
HIPK3Q9H422 Y_RNA.270-201ENST00000364693 104 ntBASIC1.56□□□□□ -2.16
HIPK3Q9H422 RNU6-643P-201ENST00000384018 107 ntBASIC1.56□□□□□ -2.16
HIPK3Q9H422 RNU6-886P-201ENST00000384319 105 ntBASIC1.56□□□□□ -2.16
HIPK3Q9H422 SNORD38C-201ENST00000384381 69 ntBASIC1.56□□□□□ -2.16
HIPK3Q9H422 SEPT7P4-201ENST00000437076 306 ntBASIC1.56□□□□□ -2.16
HIPK3Q9H422 HSPE1P24-201ENST00000450782 238 ntBASIC1.56□□□□□ -2.16
HIPK3Q9H422 AC074198.2-201ENST00000508153 258 ntBASIC1.56□□□□□ -2.16
HIPK3Q9H422 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
HIPK3Q9H422 MIR8063-201ENST00000621930 81 ntBASIC1.56□□□□□ -2.16
HIPK3Q9H422 Y_RNA.66-201ENST00000362862 102 ntBASIC1.55□□□□□ -2.16
HIPK3Q9H422 SNORD61-201ENST00000384252 73 ntBASIC1.55□□□□□ -2.16
HIPK3Q9H422 Y_RNA.555-201ENST00000384673 110 ntBASIC1.55□□□□□ -2.16
HIPK3Q9H422 MIR516B2-201ENST00000385190 85 ntBASIC1.55□□□□□ -2.16
HIPK3Q9H422 MIR653-201ENST00000385279 96 ntBASIC1.55□□□□□ -2.16
HIPK3Q9H422 MT-TR-201ENST00000387439 65 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 185.3 ms