Protein–RNA interactions for Protein: Q9H3S1

SEMA4A, Semaphorin-4A, humanhuman

Predictions only

Length 761 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4AQ9H3S1 RNU6-126P-201ENST00000516685 103 ntBASIC2.45□□□□□ -2.02
SEMA4AQ9H3S1 AC069114.2-201ENST00000604699 304 ntBASIC2.45□□□□□ -2.02
SEMA4AQ9H3S1 AC046143.2-201ENST00000609789 160 ntBASIC2.45□□□□□ -2.02
SEMA4AQ9H3S1 AL137067.1-201ENST00000615933 120 ntBASIC2.45□□□□□ -2.02
SEMA4AQ9H3S1 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
SEMA4AQ9H3S1 AC016717.2-201ENST00000609089 5141 ntBASIC2.44□□□□□ -2.02
SEMA4AQ9H3S1 MIR337-201ENST00000362281 93 ntBASIC2.44□□□□□ -2.02
SEMA4AQ9H3S1 Y_RNA.118-201ENST00000363300 101 ntBASIC2.44□□□□□ -2.02
SEMA4AQ9H3S1 U8.6-201ENST00000364939 135 ntBASIC2.44□□□□□ -2.02
SEMA4AQ9H3S1 Y_RNA.388-201ENST00000383919 113 ntBASIC2.44□□□□□ -2.02
SEMA4AQ9H3S1 SNORA51.5-201ENST00000384126 131 ntBASIC2.44□□□□□ -2.02
SEMA4AQ9H3S1 Y_RNA.466-201ENST00000384294 113 ntBASIC2.44□□□□□ -2.02
SEMA4AQ9H3S1 MIR518A2-201ENST00000384966 87 ntBASIC2.44□□□□□ -2.02
SEMA4AQ9H3S1 HMGN2P39-201ENST00000398005 273 ntBASIC2.44□□□□□ -2.02
SEMA4AQ9H3S1 SNORA19.1-201ENST00000410656 129 ntBASIC2.44□□□□□ -2.02
SEMA4AQ9H3S1 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.44□□□□□ -2.02
SEMA4AQ9H3S1 HMGN1P7-201ENST00000491722 313 ntBASIC2.44□□□□□ -2.02
SEMA4AQ9H3S1 RNU6-762P-201ENST00000517107 102 ntBASIC2.44□□□□□ -2.02
SEMA4AQ9H3S1 AP002004.2-201ENST00000531656 154 ntBASIC2.44□□□□□ -2.02
SEMA4AQ9H3S1 MIR4662B-201ENST00000579498 81 ntBASIC2.44□□□□□ -2.02
SEMA4AQ9H3S1 MIR4781-201ENST00000585250 76 ntBASIC2.44□□□□□ -2.02
SEMA4AQ9H3S1 AC022202.1-201ENST00000613515 211 ntBASIC2.44□□□□□ -2.02
SEMA4AQ9H3S1 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.44□□□□□ -2.02
SEMA4AQ9H3S1 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
SEMA4AQ9H3S1 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.43□□□□□ -2.02
SEMA4AQ9H3S1 AC080100.1-201ENST00000624239 5356 ntBASIC2.43□□□□□ -2.02
SEMA4AQ9H3S1 Y_RNA.85-201ENST00000363014 111 ntBASIC2.43□□□□□ -2.02
SEMA4AQ9H3S1 Y_RNA.163-201ENST00000363702 113 ntBASIC2.43□□□□□ -2.02
SEMA4AQ9H3S1 RNU6-1019P-201ENST00000364424 107 ntBASIC2.43□□□□□ -2.02
SEMA4AQ9H3S1 Y_RNA.242-201ENST00000364473 110 ntBASIC2.43□□□□□ -2.02
SEMA4AQ9H3S1 Y_RNA.281-201ENST00000364774 94 ntBASIC2.43□□□□□ -2.02
SEMA4AQ9H3S1 SNORA64-201ENST00000384674 134 ntBASIC2.43□□□□□ -2.02
SEMA4AQ9H3S1 MT-TI-201ENST00000387365 69 ntBASIC2.43□□□□□ -2.02
SEMA4AQ9H3S1 RNA5SP270-201ENST00000411361 118 ntBASIC2.43□□□□□ -2.02
SEMA4AQ9H3S1 BX510359.4-201ENST00000423750 193 ntBASIC2.43□□□□□ -2.02
SEMA4AQ9H3S1 AC099677.2-201ENST00000436385 175 ntBASIC2.43□□□□□ -2.02
SEMA4AQ9H3S1 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.43□□□□□ -2.02
SEMA4AQ9H3S1 AL163195.1-201ENST00000496941 348 ntBASIC2.43□□□□□ -2.02
SEMA4AQ9H3S1 SCARNA15-202ENST00000516881 127 ntBASIC2.43□□□□□ -2.02
SEMA4AQ9H3S1 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.43□□□□□ -2.02
SEMA4AQ9H3S1 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.43□□□□□ -2.02
SEMA4AQ9H3S1 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
SEMA4AQ9H3S1 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
SEMA4AQ9H3S1 MIR126-201ENST00000362291 85 ntBASIC2.42□□□□□ -2.02
SEMA4AQ9H3S1 RNU6-294P-201ENST00000364999 102 ntBASIC2.42□□□□□ -2.02
SEMA4AQ9H3S1 Y_RNA.328-201ENST00000365208 113 ntBASIC2.42□□□□□ -2.02
SEMA4AQ9H3S1 MIR518F-201ENST00000384973 87 ntBASIC2.42□□□□□ -2.02
SEMA4AQ9H3S1 RNU11-3P-201ENST00000391111 133 ntBASIC2.42□□□□□ -2.02
SEMA4AQ9H3S1 RPL39P34-201ENST00000477141 156 ntBASIC2.42□□□□□ -2.02
SEMA4AQ9H3S1 RNU6-412P-201ENST00000516434 106 ntBASIC2.42□□□□□ -2.02
SEMA4AQ9H3S1 MIR514B-201ENST00000516774 80 ntBASIC2.42□□□□□ -2.02
SEMA4AQ9H3S1 Y_RNA.714-201ENST00000517065 90 ntBASIC2.42□□□□□ -2.02
SEMA4AQ9H3S1 AC103810.6-201ENST00000606708 136 ntBASIC2.42□□□□□ -2.02
SEMA4AQ9H3S1 AP001318.4-201ENST00000616637 121 ntBASIC2.42□□□□□ -2.02
SEMA4AQ9H3S1 AL591926.4-201ENST00000616895 298 ntBASIC2.42□□□□□ -2.02
SEMA4AQ9H3S1 MIR219B-201ENST00000637023 88 ntBASIC2.42□□□□□ -2.02
SEMA4AQ9H3S1 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
SEMA4AQ9H3S1 MIR488-201ENST00000365739 83 ntBASIC2.41□□□□□ -2.02
SEMA4AQ9H3S1 RNY1P7-201ENST00000384743 110 ntBASIC2.41□□□□□ -2.02
SEMA4AQ9H3S1 MIR570-201ENST00000384917 97 ntBASIC2.41□□□□□ -2.02
SEMA4AQ9H3S1 MIR1283-2-201ENST00000408621 87 ntBASIC2.41□□□□□ -2.02
SEMA4AQ9H3S1 RNA5SP445-201ENST00000515889 115 ntBASIC2.41□□□□□ -2.02
SEMA4AQ9H3S1 RNU6-295P-201ENST00000516901 104 ntBASIC2.41□□□□□ -2.02
SEMA4AQ9H3S1 AC008507.4-201ENST00000585464 127 ntBASIC2.41□□□□□ -2.02
SEMA4AQ9H3S1 AC087685.1-201ENST00000587507 141 ntBASIC2.41□□□□□ -2.02
SEMA4AQ9H3S1 AC022513.1-201ENST00000624512 117 ntBASIC2.41□□□□□ -2.02
SEMA4AQ9H3S1 MIR1291-201ENST00000627649 87 ntBASIC2.41□□□□□ -2.02
SEMA4AQ9H3S1 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.02
SEMA4AQ9H3S1 AL596028.1-201ENST00000326971 197 ntBASIC2.4□□□□□ -2.03
SEMA4AQ9H3S1 RNU6-766P-201ENST00000362478 107 ntBASIC2.4□□□□□ -2.03
SEMA4AQ9H3S1 RNU6-888P-201ENST00000363010 101 ntBASIC2.4□□□□□ -2.03
SEMA4AQ9H3S1 Y_RNA.355-201ENST00000365462 98 ntBASIC2.4□□□□□ -2.03
SEMA4AQ9H3S1 RNU6-1014P-201ENST00000383940 103 ntBASIC2.4□□□□□ -2.03
SEMA4AQ9H3S1 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
SEMA4AQ9H3S1 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.4□□□□□ -2.03
SEMA4AQ9H3S1 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.4□□□□□ -2.03
SEMA4AQ9H3S1 RNU7-28P-201ENST00000516759 62 ntBASIC2.4□□□□□ -2.03
SEMA4AQ9H3S1 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.4□□□□□ -2.03
SEMA4AQ9H3S1 U1.36-201ENST00000620684 176 ntBASIC2.4□□□□□ -2.03
SEMA4AQ9H3S1 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
SEMA4AQ9H3S1 RNU6-950P-201ENST00000384651 107 ntBASIC2.39□□□□□ -2.03
SEMA4AQ9H3S1 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
SEMA4AQ9H3S1 RNU6-440P-201ENST00000390882 105 ntBASIC2.39□□□□□ -2.03
SEMA4AQ9H3S1 AC104435.1-201ENST00000483483 166 ntBASIC2.39□□□□□ -2.03
SEMA4AQ9H3S1 AC026436.1-201ENST00000510537 270 ntBASIC2.39□□□□□ -2.03
SEMA4AQ9H3S1 RNU6-830P-201ENST00000516353 107 ntBASIC2.39□□□□□ -2.03
SEMA4AQ9H3S1 RNY4P20-201ENST00000516678 93 ntBASIC2.39□□□□□ -2.03
SEMA4AQ9H3S1 AC078899.2-201ENST00000595282 212 ntBASIC2.39□□□□□ -2.03
SEMA4AQ9H3S1 HSPE1P19-201ENST00000603327 295 ntBASIC2.39□□□□□ -2.03
SEMA4AQ9H3S1 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
SEMA4AQ9H3S1 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
SEMA4AQ9H3S1 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
SEMA4AQ9H3S1 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SEMA4AQ9H3S1 SNORA1B-201ENST00000362535 133 ntBASIC2.38□□□□□ -2.03
SEMA4AQ9H3S1 SNORD68-201ENST00000363214 84 ntBASIC2.38□□□□□ -2.03
SEMA4AQ9H3S1 RNU6-414P-201ENST00000363705 104 ntBASIC2.38□□□□□ -2.03
SEMA4AQ9H3S1 RNU6-1292P-201ENST00000383856 107 ntBASIC2.38□□□□□ -2.03
SEMA4AQ9H3S1 MIR590-201ENST00000385008 97 ntBASIC2.38□□□□□ -2.03
SEMA4AQ9H3S1 SNORA48.1-201ENST00000390879 135 ntBASIC2.38□□□□□ -2.03
SEMA4AQ9H3S1 MIR1302-5-201ENST00000408164 150 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 205.9 ms