Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 MIR548G-201ENST00000408442 89 ntBASIC3.15□□□□□ -1.91
COL25A1Q9BXS0 TRIAP1P1-201ENST00000427062 225 ntBASIC3.15□□□□□ -1.91
COL25A1Q9BXS0 RPS29P28-201ENST00000446439 141 ntBASIC3.15□□□□□ -1.91
COL25A1Q9BXS0 AL450471.1-201ENST00000447509 127 ntBASIC3.15□□□□□ -1.91
COL25A1Q9BXS0 AL163195.1-201ENST00000496941 348 ntBASIC3.15□□□□□ -1.91
COL25A1Q9BXS0 AC024995.1-201ENST00000523014 93 ntBASIC3.15□□□□□ -1.91
COL25A1Q9BXS0 HMSD-204ENST00000526932 162 ntTSL 3 BASIC3.15□□□□□ -1.91
COL25A1Q9BXS0 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC3.15□□□□□ -1.91
COL25A1Q9BXS0 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
COL25A1Q9BXS0 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.15□□□□□ -1.91
COL25A1Q9BXS0 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.14□□□□□ -1.91
COL25A1Q9BXS0 AC096644.4-201ENST00000563417 2912 ntBASIC3.14□□□□□ -1.91
COL25A1Q9BXS0 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.14□□□□□ -1.91
COL25A1Q9BXS0 RNU4-32P-201ENST00000363404 141 ntBASIC3.14□□□□□ -1.91
COL25A1Q9BXS0 MIR206-201ENST00000384872 86 ntBASIC3.14□□□□□ -1.91
COL25A1Q9BXS0 MIR767-201ENST00000390228 109 ntBASIC3.14□□□□□ -1.91
COL25A1Q9BXS0 Z98941.1-201ENST00000407764 100 ntBASIC3.14□□□□□ -1.91
COL25A1Q9BXS0 AC011753.1-201ENST00000451001 220 ntBASIC3.14□□□□□ -1.91
COL25A1Q9BXS0 SCARNA18B-201ENST00000458806 135 ntBASIC3.14□□□□□ -1.91
COL25A1Q9BXS0 SCARNA17.1-201ENST00000516211 143 ntBASIC3.14□□□□□ -1.91
COL25A1Q9BXS0 SCARNA17.2-201ENST00000516334 143 ntBASIC3.14□□□□□ -1.91
COL25A1Q9BXS0 RNU7-181P-201ENST00000517234 74 ntBASIC3.14□□□□□ -1.91
COL25A1Q9BXS0 AP000942.3-201ENST00000603702 160 ntBASIC3.14□□□□□ -1.91
COL25A1Q9BXS0 TP73-AS1.1-201ENST00000611447 161 ntBASIC3.14□□□□□ -1.91
COL25A1Q9BXS0 SCARNA17.4-201ENST00000614296 143 ntBASIC3.14□□□□□ -1.91
COL25A1Q9BXS0 XIST_intron.1-201ENST00000619444 68 ntBASIC3.14□□□□□ -1.91
COL25A1Q9BXS0 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
COL25A1Q9BXS0 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
COL25A1Q9BXS0 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
COL25A1Q9BXS0 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
COL25A1Q9BXS0 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
COL25A1Q9BXS0 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
COL25A1Q9BXS0 Y_RNA.386-201ENST00000383913 105 ntBASIC3.13□□□□□ -1.91
COL25A1Q9BXS0 RNU6-411P-201ENST00000384451 107 ntBASIC3.13□□□□□ -1.91
COL25A1Q9BXS0 MIR1267-201ENST00000408723 78 ntBASIC3.13□□□□□ -1.91
COL25A1Q9BXS0 RNA5SP425-201ENST00000410336 112 ntBASIC3.13□□□□□ -1.91
COL25A1Q9BXS0 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.13□□□□□ -1.91
COL25A1Q9BXS0 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC3.13□□□□□ -1.91
COL25A1Q9BXS0 snoU13.18-201ENST00000459483 104 ntBASIC3.13□□□□□ -1.91
COL25A1Q9BXS0 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC3.13□□□□□ -1.91
COL25A1Q9BXS0 RNU6-871P-201ENST00000516122 100 ntBASIC3.13□□□□□ -1.91
COL25A1Q9BXS0 RNA5SP148-201ENST00000516527 94 ntBASIC3.13□□□□□ -1.91
COL25A1Q9BXS0 RNU6-826P-201ENST00000516827 104 ntBASIC3.13□□□□□ -1.91
COL25A1Q9BXS0 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.13□□□□□ -1.91
COL25A1Q9BXS0 RNU6-90P-201ENST00000606352 106 ntBASIC3.13□□□□□ -1.91
COL25A1Q9BXS0 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
COL25A1Q9BXS0 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
COL25A1Q9BXS0 AC091152.2-201ENST00000591628 2569 ntBASIC3.12□□□□□ -1.91
COL25A1Q9BXS0 MAPK10-266ENST00000641066 6555 ntBASIC3.12□□□□□ -1.91
COL25A1Q9BXS0 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.12□□□□□ -1.91
COL25A1Q9BXS0 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.12□□□□□ -1.91
COL25A1Q9BXS0 Y_RNA.173-201ENST00000363776 113 ntBASIC3.12□□□□□ -1.91
COL25A1Q9BXS0 MIR515-2-201ENST00000384883 83 ntBASIC3.12□□□□□ -1.91
COL25A1Q9BXS0 MIR515-1-201ENST00000384884 83 ntBASIC3.12□□□□□ -1.91
COL25A1Q9BXS0 SNORD67-201ENST00000390833 111 ntBASIC3.12□□□□□ -1.91
COL25A1Q9BXS0 MIR1236-201ENST00000408340 102 ntBASIC3.12□□□□□ -1.91
COL25A1Q9BXS0 RNU4-37P-201ENST00000410214 84 ntBASIC3.12□□□□□ -1.91
COL25A1Q9BXS0 RNU2-48P-201ENST00000410694 191 ntBASIC3.12□□□□□ -1.91
COL25A1Q9BXS0 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.12□□□□□ -1.91
COL25A1Q9BXS0 AL161788.1-201ENST00000441805 169 ntBASIC3.12□□□□□ -1.91
COL25A1Q9BXS0 RNU7-28P-201ENST00000516759 62 ntBASIC3.12□□□□□ -1.91
COL25A1Q9BXS0 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.12□□□□□ -1.91
COL25A1Q9BXS0 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
COL25A1Q9BXS0 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
COL25A1Q9BXS0 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
COL25A1Q9BXS0 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
COL25A1Q9BXS0 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
COL25A1Q9BXS0 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
COL25A1Q9BXS0 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
COL25A1Q9BXS0 RNU6-859P-201ENST00000362728 107 ntBASIC3.11□□□□□ -1.91
COL25A1Q9BXS0 RNU1-105P-201ENST00000363470 161 ntBASIC3.11□□□□□ -1.91
COL25A1Q9BXS0 RNU6-424P-201ENST00000384367 105 ntBASIC3.11□□□□□ -1.91
COL25A1Q9BXS0 MIR499A-201ENST00000384903 122 ntBASIC3.11□□□□□ -1.91
COL25A1Q9BXS0 SRIP3-201ENST00000413200 219 ntBASIC3.11□□□□□ -1.91
COL25A1Q9BXS0 AC087499.7-201ENST00000441958 109 ntBASIC3.11□□□□□ -1.91
COL25A1Q9BXS0 RN7SL330P-201ENST00000469709 307 ntBASIC3.11□□□□□ -1.91
COL25A1Q9BXS0 RNU6-557P-201ENST00000516842 110 ntBASIC3.11□□□□□ -1.91
COL25A1Q9BXS0 RNU6-1015P-201ENST00000517121 99 ntBASIC3.11□□□□□ -1.91
COL25A1Q9BXS0 RNU6-1116P-201ENST00000517269 99 ntBASIC3.11□□□□□ -1.91
COL25A1Q9BXS0 MIR6717-201ENST00000622747 73 ntBASIC3.11□□□□□ -1.91
COL25A1Q9BXS0 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
COL25A1Q9BXS0 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.1□□□□□ -1.91
COL25A1Q9BXS0 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
COL25A1Q9BXS0 MIRLET7A1-201ENST00000362295 80 ntBASIC3.1□□□□□ -1.91
COL25A1Q9BXS0 RNU1-23P-201ENST00000363361 144 ntBASIC3.1□□□□□ -1.91
COL25A1Q9BXS0 RNA5SP42-201ENST00000364278 115 ntBASIC3.1□□□□□ -1.91
COL25A1Q9BXS0 MIR181B2-201ENST00000385004 89 ntBASIC3.1□□□□□ -1.91
COL25A1Q9BXS0 RNA5SP261-201ENST00000410536 106 ntBASIC3.1□□□□□ -1.91
COL25A1Q9BXS0 UQCRHP3-201ENST00000451503 251 ntBASIC3.1□□□□□ -1.91
COL25A1Q9BXS0 RN7SL93P-201ENST00000463035 293 ntBASIC3.1□□□□□ -1.91
COL25A1Q9BXS0 RN7SL297P-201ENST00000483161 293 ntBASIC3.1□□□□□ -1.91
COL25A1Q9BXS0 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.1□□□□□ -1.91
COL25A1Q9BXS0 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
COL25A1Q9BXS0 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.1□□□□□ -1.91
COL25A1Q9BXS0 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
COL25A1Q9BXS0 RNU6-163P-201ENST00000384396 106 ntBASIC3.09□□□□□ -1.91
COL25A1Q9BXS0 RNU6-851P-201ENST00000384565 107 ntBASIC3.09□□□□□ -1.91
COL25A1Q9BXS0 MIR95-201ENST00000385072 81 ntBASIC3.09□□□□□ -1.91
COL25A1Q9BXS0 RNU6-1190P-201ENST00000410811 104 ntBASIC3.09□□□□□ -1.91
COL25A1Q9BXS0 AC015922.2-201ENST00000435593 184 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms