Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 RNU6-763P-201ENST00000390865 106 ntBASIC1.53□□□□□ -2.16
HERPUD2Q9BSE4 SNORA67.6-201ENST00000391093 99 ntBASIC1.53□□□□□ -2.16
HERPUD2Q9BSE4 TMSB4XP3-201ENST00000445144 114 ntBASIC1.53□□□□□ -2.16
HERPUD2Q9BSE4 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.53□□□□□ -2.16
HERPUD2Q9BSE4 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.53□□□□□ -2.16
HERPUD2Q9BSE4 Y_RNA.662-201ENST00000516028 97 ntBASIC1.53□□□□□ -2.16
HERPUD2Q9BSE4 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.53□□□□□ -2.16
HERPUD2Q9BSE4 AC037487.3-201ENST00000606668 112 ntBASIC1.53□□□□□ -2.16
HERPUD2Q9BSE4 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.52□□□□□ -2.17
HERPUD2Q9BSE4 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
HERPUD2Q9BSE4 MIR378A-201ENST00000362177 66 ntBASIC1.52□□□□□ -2.17
HERPUD2Q9BSE4 SNORA25.1-201ENST00000362326 128 ntBASIC1.52□□□□□ -2.17
HERPUD2Q9BSE4 RNU4-10P-201ENST00000364383 140 ntBASIC1.52□□□□□ -2.17
HERPUD2Q9BSE4 Y_RNA.272-201ENST00000364696 102 ntBASIC1.52□□□□□ -2.17
HERPUD2Q9BSE4 MIR526A1-201ENST00000384897 85 ntBASIC1.52□□□□□ -2.17
HERPUD2Q9BSE4 HMGN2P32-201ENST00000444648 269 ntBASIC1.52□□□□□ -2.17
HERPUD2Q9BSE4 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.52□□□□□ -2.17
HERPUD2Q9BSE4 RNU7-121P-201ENST00000516604 62 ntBASIC1.52□□□□□ -2.17
HERPUD2Q9BSE4 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.52□□□□□ -2.17
HERPUD2Q9BSE4 MIR4303-201ENST00000581299 66 ntBASIC1.52□□□□□ -2.17
HERPUD2Q9BSE4 MIR2681-201ENST00000581814 105 ntBASIC1.52□□□□□ -2.17
HERPUD2Q9BSE4 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.51□□□□□ -2.17
HERPUD2Q9BSE4 Y_RNA.571-201ENST00000384753 98 ntBASIC1.51□□□□□ -2.17
HERPUD2Q9BSE4 RNU6-955P-201ENST00000410497 104 ntBASIC1.51□□□□□ -2.17
HERPUD2Q9BSE4 AL354695.1-201ENST00000427935 228 ntBASIC1.51□□□□□ -2.17
HERPUD2Q9BSE4 RNU7-141P-201ENST00000459304 62 ntBASIC1.51□□□□□ -2.17
HERPUD2Q9BSE4 Y_RNA.679-201ENST00000516416 91 ntBASIC1.51□□□□□ -2.17
HERPUD2Q9BSE4 RNU6-453P-201ENST00000516819 85 ntBASIC1.51□□□□□ -2.17
HERPUD2Q9BSE4 SNORA31.24-201ENST00000517232 57 ntBASIC1.51□□□□□ -2.17
HERPUD2Q9BSE4 AC100767.1-201ENST00000528178 123 ntBASIC1.51□□□□□ -2.17
HERPUD2Q9BSE4 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.51□□□□□ -2.17
HERPUD2Q9BSE4 AL512598.1-201ENST00000610158 273 ntBASIC1.51□□□□□ -2.17
HERPUD2Q9BSE4 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
HERPUD2Q9BSE4 AP000648.3-201ENST00000623539 4507 ntBASIC1.5□□□□□ -2.17
HERPUD2Q9BSE4 RNU4-84P-201ENST00000364200 139 ntBASIC1.5□□□□□ -2.17
HERPUD2Q9BSE4 RNU6-60P-201ENST00000364792 103 ntBASIC1.5□□□□□ -2.17
HERPUD2Q9BSE4 SNORA72.4-201ENST00000384174 132 ntBASIC1.5□□□□□ -2.17
HERPUD2Q9BSE4 RNU6-959P-201ENST00000384671 107 ntBASIC1.5□□□□□ -2.17
HERPUD2Q9BSE4 Y_RNA.568-201ENST00000384742 113 ntBASIC1.5□□□□□ -2.17
HERPUD2Q9BSE4 MIR136-201ENST00000385207 82 ntBASIC1.5□□□□□ -2.17
HERPUD2Q9BSE4 MIR569-201ENST00000385228 96 ntBASIC1.5□□□□□ -2.17
HERPUD2Q9BSE4 MIR802-201ENST00000390235 94 ntBASIC1.5□□□□□ -2.17
HERPUD2Q9BSE4 Y_RNA.586-201ENST00000391146 98 ntBASIC1.5□□□□□ -2.17
HERPUD2Q9BSE4 RNU6-381P-201ENST00000391259 108 ntBASIC1.5□□□□□ -2.17
HERPUD2Q9BSE4 MIR1278-201ENST00000408753 81 ntBASIC1.5□□□□□ -2.17
HERPUD2Q9BSE4 RNU4-62P-201ENST00000410125 130 ntBASIC1.5□□□□□ -2.17
HERPUD2Q9BSE4 RNU6-257P-201ENST00000410238 98 ntBASIC1.5□□□□□ -2.17
HERPUD2Q9BSE4 SNORA36B-201ENST00000410438 131 ntBASIC1.5□□□□□ -2.17
HERPUD2Q9BSE4 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.5□□□□□ -2.17
HERPUD2Q9BSE4 SNORA31.4-201ENST00000516049 129 ntBASIC1.5□□□□□ -2.17
HERPUD2Q9BSE4 RNU2-4P-201ENST00000606190 192 ntBASIC1.5□□□□□ -2.17
HERPUD2Q9BSE4 AL365222.1-201ENST00000614661 98 ntBASIC1.5□□□□□ -2.17
HERPUD2Q9BSE4 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
HERPUD2Q9BSE4 Y_RNA.75-201ENST00000362927 97 ntBASIC1.49□□□□□ -2.17
HERPUD2Q9BSE4 RNU6-1290P-201ENST00000362957 109 ntBASIC1.49□□□□□ -2.17
HERPUD2Q9BSE4 SNORD14E-201ENST00000364009 85 ntBASIC1.49□□□□□ -2.17
HERPUD2Q9BSE4 RNU1-42P-201ENST00000364033 160 ntBASIC1.49□□□□□ -2.17
HERPUD2Q9BSE4 Y_RNA.238-201ENST00000364441 102 ntBASIC1.49□□□□□ -2.17
HERPUD2Q9BSE4 Y_RNA.262-201ENST00000364641 102 ntBASIC1.49□□□□□ -2.17
HERPUD2Q9BSE4 SNORD50B-201ENST00000364995 70 ntBASIC1.49□□□□□ -2.17
HERPUD2Q9BSE4 Y_RNA.336-201ENST00000365307 109 ntBASIC1.49□□□□□ -2.17
HERPUD2Q9BSE4 RNU6-514P-201ENST00000384208 107 ntBASIC1.49□□□□□ -2.17
HERPUD2Q9BSE4 RNU6-22P-201ENST00000384355 107 ntBASIC1.49□□□□□ -2.17
HERPUD2Q9BSE4 MIR222-201ENST00000384992 110 ntBASIC1.49□□□□□ -2.17
HERPUD2Q9BSE4 SEPT7P4-201ENST00000437076 306 ntBASIC1.49□□□□□ -2.17
HERPUD2Q9BSE4 RNU6-437P-201ENST00000459408 95 ntBASIC1.49□□□□□ -2.17
HERPUD2Q9BSE4 AC023790.1-201ENST00000482174 347 ntBASIC1.49□□□□□ -2.17
HERPUD2Q9BSE4 SNORA31.2-201ENST00000516019 134 ntBASIC1.49□□□□□ -2.17
HERPUD2Q9BSE4 RNU6-561P-201ENST00000516222 102 ntBASIC1.49□□□□□ -2.17
HERPUD2Q9BSE4 SNORD116-25-201ENST00000516517 92 ntBASIC1.49□□□□□ -2.17
HERPUD2Q9BSE4 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.49□□□□□ -2.17
HERPUD2Q9BSE4 DNAJC19P9-201ENST00000555084 351 ntBASIC1.49□□□□□ -2.17
HERPUD2Q9BSE4 AL160236.1-201ENST00000556317 195 ntBASIC1.49□□□□□ -2.17
HERPUD2Q9BSE4 AC134026.1-201ENST00000623249 2239 ntBASIC1.48□□□□□ -2.17
HERPUD2Q9BSE4 SNORA22C-201ENST00000384614 134 ntBASIC1.48□□□□□ -2.17
HERPUD2Q9BSE4 MIR516B2-201ENST00000385190 85 ntBASIC1.48□□□□□ -2.17
HERPUD2Q9BSE4 BTF3P4-201ENST00000418852 495 ntBASIC1.48□□□□□ -2.17
HERPUD2Q9BSE4 BTF3P11-201ENST00000426582 477 ntBASIC1.48□□□□□ -2.17
HERPUD2Q9BSE4 RNU7-197P-201ENST00000458836 62 ntBASIC1.48□□□□□ -2.17
HERPUD2Q9BSE4 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.48□□□□□ -2.17
HERPUD2Q9BSE4 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.48□□□□□ -2.17
HERPUD2Q9BSE4 RNU6-426P-201ENST00000516464 97 ntBASIC1.48□□□□□ -2.17
HERPUD2Q9BSE4 RNU6-1007P-201ENST00000516586 107 ntBASIC1.48□□□□□ -2.17
HERPUD2Q9BSE4 SNORA70.22-201ENST00000517160 124 ntBASIC1.48□□□□□ -2.17
HERPUD2Q9BSE4 AC068338.1-201ENST00000565567 176 ntBASIC1.48□□□□□ -2.17
HERPUD2Q9BSE4 AC087685.1-201ENST00000587507 141 ntBASIC1.48□□□□□ -2.17
HERPUD2Q9BSE4 snoU13.31-201ENST00000607291 104 ntBASIC1.48□□□□□ -2.17
HERPUD2Q9BSE4 MIR3658-201ENST00000636291 56 ntBASIC1.48□□□□□ -2.17
HERPUD2Q9BSE4 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
HERPUD2Q9BSE4 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.48□□□□□ -2.17
HERPUD2Q9BSE4 Y_RNA.7-201ENST00000362352 102 ntBASIC1.47□□□□□ -2.17
HERPUD2Q9BSE4 RNU6-1209P-201ENST00000363655 107 ntBASIC1.47□□□□□ -2.17
HERPUD2Q9BSE4 RNU6-899P-201ENST00000363947 107 ntBASIC1.47□□□□□ -2.17
HERPUD2Q9BSE4 Y_RNA.215-201ENST00000364204 112 ntBASIC1.47□□□□□ -2.17
HERPUD2Q9BSE4 Y_RNA.218-201ENST00000364218 104 ntBASIC1.47□□□□□ -2.17
HERPUD2Q9BSE4 RNU6-312P-201ENST00000364629 107 ntBASIC1.47□□□□□ -2.17
HERPUD2Q9BSE4 SNORD116-18-201ENST00000383961 92 ntBASIC1.47□□□□□ -2.17
HERPUD2Q9BSE4 Y_RNA.400-201ENST00000383963 111 ntBASIC1.47□□□□□ -2.17
HERPUD2Q9BSE4 SNORA25-201ENST00000384384 134 ntBASIC1.47□□□□□ -2.17
HERPUD2Q9BSE4 MIR626-201ENST00000385032 94 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 228.7 ms