Protein–RNA interactions for Protein: Q9BQT9

CLSTN3, Calsyntenin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3Q9BQT9 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.47□□□□□ -2.17
CLSTN3Q9BQT9 SNORD77.4-201ENST00000516158 81 ntBASIC1.47□□□□□ -2.17
CLSTN3Q9BQT9 RNU7-149P-201ENST00000516739 59 ntBASIC1.47□□□□□ -2.17
CLSTN3Q9BQT9 RNA5SP102-201ENST00000516865 106 ntBASIC1.47□□□□□ -2.17
CLSTN3Q9BQT9 AC006441.5-201ENST00000612680 209 ntBASIC1.47□□□□□ -2.17
CLSTN3Q9BQT9 Pinc.1-201ENST00000616452 154 ntBASIC1.47□□□□□ -2.17
CLSTN3Q9BQT9 AC141273.2-201ENST00000618989 130 ntBASIC1.47□□□□□ -2.17
CLSTN3Q9BQT9 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.47□□□□□ -2.17
CLSTN3Q9BQT9 AP000648.3-201ENST00000623539 4507 ntBASIC1.46□□□□□ -2.18
CLSTN3Q9BQT9 Y_RNA.199-201ENST00000364014 102 ntBASIC1.46□□□□□ -2.18
CLSTN3Q9BQT9 snoU2_19.4-201ENST00000364329 80 ntBASIC1.46□□□□□ -2.18
CLSTN3Q9BQT9 RNU6-53P-201ENST00000365367 106 ntBASIC1.46□□□□□ -2.18
CLSTN3Q9BQT9 Y_RNA.552-201ENST00000384665 112 ntBASIC1.46□□□□□ -2.18
CLSTN3Q9BQT9 MIR7-2-201ENST00000384970 110 ntBASIC1.46□□□□□ -2.18
CLSTN3Q9BQT9 RPL39P39-201ENST00000455840 151 ntBASIC1.46□□□□□ -2.18
CLSTN3Q9BQT9 RNU6-917P-201ENST00000516294 104 ntBASIC1.46□□□□□ -2.18
CLSTN3Q9BQT9 RNU6-830P-201ENST00000516353 107 ntBASIC1.46□□□□□ -2.18
CLSTN3Q9BQT9 RNU6-922P-201ENST00000516753 99 ntBASIC1.46□□□□□ -2.18
CLSTN3Q9BQT9 AC090142.3-201ENST00000519012 385 ntBASIC1.46□□□□□ -2.18
CLSTN3Q9BQT9 MIR3664-201ENST00000579074 99 ntBASIC1.46□□□□□ -2.18
CLSTN3Q9BQT9 AC009779.6-201ENST00000603972 165 ntBASIC1.46□□□□□ -2.18
CLSTN3Q9BQT9 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
CLSTN3Q9BQT9 MIR6734-201ENST00000621166 68 ntBASIC1.46□□□□□ -2.18
CLSTN3Q9BQT9 Y_RNA.200-201ENST00000364018 102 ntBASIC1.45□□□□□ -2.18
CLSTN3Q9BQT9 Y_RNA.308-201ENST00000365043 101 ntBASIC1.45□□□□□ -2.18
CLSTN3Q9BQT9 AL512310.8-201ENST00000550183 120 ntBASIC1.45□□□□□ -2.18
CLSTN3Q9BQT9 AC130289.1-201ENST00000577321 73 ntBASIC1.45□□□□□ -2.18
CLSTN3Q9BQT9 MIR6078-201ENST00000611069 100 ntBASIC1.45□□□□□ -2.18
CLSTN3Q9BQT9 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
CLSTN3Q9BQT9 RNU6-268P-201ENST00000364174 107 ntBASIC1.44□□□□□ -2.18
CLSTN3Q9BQT9 RNU6-923P-201ENST00000364753 107 ntBASIC1.44□□□□□ -2.18
CLSTN3Q9BQT9 Y_RNA.515-201ENST00000384535 112 ntBASIC1.44□□□□□ -2.18
CLSTN3Q9BQT9 RNU6-1067P-201ENST00000384752 107 ntBASIC1.44□□□□□ -2.18
CLSTN3Q9BQT9 MIR526A1-201ENST00000384897 85 ntBASIC1.44□□□□□ -2.18
CLSTN3Q9BQT9 MT-TT-201ENST00000387460 66 ntBASIC1.44□□□□□ -2.18
CLSTN3Q9BQT9 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
CLSTN3Q9BQT9 SNORD72-201ENST00000390994 80 ntBASIC1.44□□□□□ -2.18
CLSTN3Q9BQT9 RNU6-381P-201ENST00000391259 108 ntBASIC1.44□□□□□ -2.18
CLSTN3Q9BQT9 RNU6-493P-201ENST00000391321 108 ntBASIC1.44□□□□□ -2.18
CLSTN3Q9BQT9 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.44□□□□□ -2.18
CLSTN3Q9BQT9 RPS27P16-201ENST00000425758 201 ntBASIC1.44□□□□□ -2.18
CLSTN3Q9BQT9 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.44□□□□□ -2.18
CLSTN3Q9BQT9 AC245047.8-201ENST00000456455 284 ntBASIC1.44□□□□□ -2.18
CLSTN3Q9BQT9 SCARNA8-201ENST00000515924 131 ntBASIC1.44□□□□□ -2.18
CLSTN3Q9BQT9 RNU6-1299P-201ENST00000516316 100 ntBASIC1.44□□□□□ -2.18
CLSTN3Q9BQT9 RNU6-453P-201ENST00000516819 85 ntBASIC1.44□□□□□ -2.18
CLSTN3Q9BQT9 AP001485.1-201ENST00000604799 199 ntBASIC1.44□□□□□ -2.18
CLSTN3Q9BQT9 AC091895.1-201ENST00000624494 256 ntBASIC1.44□□□□□ -2.18
CLSTN3Q9BQT9 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
CLSTN3Q9BQT9 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
CLSTN3Q9BQT9 Y_RNA.83-201ENST00000363005 113 ntBASIC1.43□□□□□ -2.18
CLSTN3Q9BQT9 SNORA74.3-201ENST00000517108 154 ntBASIC1.43□□□□□ -2.18
CLSTN3Q9BQT9 RNU6-365P-201ENST00000517113 106 ntBASIC1.43□□□□□ -2.18
CLSTN3Q9BQT9 MIR7974-201ENST00000615835 79 ntBASIC1.43□□□□□ -2.18
CLSTN3Q9BQT9 MIR8065-201ENST00000620577 100 ntBASIC1.43□□□□□ -2.18
CLSTN3Q9BQT9 AL442644.1-201ENST00000454390 3105 ntBASIC1.42□□□□□ -2.18
CLSTN3Q9BQT9 MIR411-201ENST00000362239 96 ntBASIC1.42□□□□□ -2.18
CLSTN3Q9BQT9 Y_RNA.121-201ENST00000363309 113 ntBASIC1.42□□□□□ -2.18
CLSTN3Q9BQT9 Y_RNA.257-201ENST00000364596 102 ntBASIC1.42□□□□□ -2.18
CLSTN3Q9BQT9 SNORA1.2-201ENST00000365189 134 ntBASIC1.42□□□□□ -2.18
CLSTN3Q9BQT9 MIR516B2-201ENST00000385190 85 ntBASIC1.42□□□□□ -2.18
CLSTN3Q9BQT9 SNORA79-201ENST00000408376 140 ntBASIC1.42□□□□□ -2.18
CLSTN3Q9BQT9 SNRPGP14-201ENST00000435400 219 ntBASIC1.42□□□□□ -2.18
CLSTN3Q9BQT9 AC004223.1-201ENST00000479840 271 ntBASIC1.42□□□□□ -2.18
CLSTN3Q9BQT9 RNA5SP153-201ENST00000516498 76 ntBASIC1.42□□□□□ -2.18
CLSTN3Q9BQT9 RNU7-43P-201ENST00000516554 64 ntBASIC1.42□□□□□ -2.18
CLSTN3Q9BQT9 RN7SKP88-201ENST00000516847 250 ntBASIC1.42□□□□□ -2.18
CLSTN3Q9BQT9 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
CLSTN3Q9BQT9 MIR4308-201ENST00000580634 81 ntBASIC1.42□□□□□ -2.18
CLSTN3Q9BQT9 MIR3660-201ENST00000584845 100 ntBASIC1.42□□□□□ -2.18
CLSTN3Q9BQT9 7SK.8-201ENST00000612110 250 ntBASIC1.42□□□□□ -2.18
CLSTN3Q9BQT9 7SK.11-201ENST00000615477 250 ntBASIC1.42□□□□□ -2.18
CLSTN3Q9BQT9 RMST_2.1-201ENST00000617263 136 ntBASIC1.42□□□□□ -2.18
CLSTN3Q9BQT9 7SK.13-201ENST00000622040 250 ntBASIC1.42□□□□□ -2.18
CLSTN3Q9BQT9 Y_RNA.7-201ENST00000362352 102 ntBASIC1.41□□□□□ -2.18
CLSTN3Q9BQT9 Y_RNA.274-201ENST00000364714 101 ntBASIC1.41□□□□□ -2.18
CLSTN3Q9BQT9 RNU6-728P-201ENST00000365375 104 ntBASIC1.41□□□□□ -2.18
CLSTN3Q9BQT9 SNORD114-22-201ENST00000365423 72 ntBASIC1.41□□□□□ -2.18
CLSTN3Q9BQT9 Y_RNA.540-201ENST00000384638 111 ntBASIC1.41□□□□□ -2.18
CLSTN3Q9BQT9 AL606845.1-201ENST00000404881 255 ntBASIC1.41□□□□□ -2.18
CLSTN3Q9BQT9 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.41□□□□□ -2.18
CLSTN3Q9BQT9 RNU6-504P-201ENST00000516568 104 ntBASIC1.41□□□□□ -2.18
CLSTN3Q9BQT9 AL160236.1-201ENST00000556317 195 ntBASIC1.41□□□□□ -2.18
CLSTN3Q9BQT9 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.41□□□□□ -2.18
CLSTN3Q9BQT9 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.41□□□□□ -2.18
CLSTN3Q9BQT9 Y_RNA.432-201ENST00000384087 111 ntBASIC1.4□□□□□ -2.19
CLSTN3Q9BQT9 SNORD41-201ENST00000386967 70 ntBASIC1.4□□□□□ -2.19
CLSTN3Q9BQT9 RNU2-70P-201ENST00000410718 179 ntBASIC1.4□□□□□ -2.19
CLSTN3Q9BQT9 RNU1-98P-201ENST00000458992 160 ntBASIC1.4□□□□□ -2.19
CLSTN3Q9BQT9 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.4□□□□□ -2.19
CLSTN3Q9BQT9 MIR3671-201ENST00000580455 88 ntBASIC1.4□□□□□ -2.19
CLSTN3Q9BQT9 MIR4744-201ENST00000581563 82 ntBASIC1.4□□□□□ -2.19
CLSTN3Q9BQT9 Z83818.1-201ENST00000603584 150 ntBASIC1.4□□□□□ -2.19
CLSTN3Q9BQT9 AC090425.1-201ENST00000610007 140 ntBASIC1.4□□□□□ -2.19
CLSTN3Q9BQT9 Y_RNA.297-201ENST00000364950 91 ntBASIC1.39□□□□□ -2.19
CLSTN3Q9BQT9 RNU6-47P-201ENST00000383866 107 ntBASIC1.39□□□□□ -2.19
CLSTN3Q9BQT9 SNORD24-201ENST00000383884 75 ntBASIC1.39□□□□□ -2.19
CLSTN3Q9BQT9 MIR520C-201ENST00000385005 87 ntBASIC1.39□□□□□ -2.19
CLSTN3Q9BQT9 SNORA40.6-201ENST00000391153 128 ntBASIC1.39□□□□□ -2.19
CLSTN3Q9BQT9 RNU6-918P-201ENST00000391219 106 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 190.9 ms