Protein–RNA interactions for Protein: Q99250

SCN2A, Sodium channel protein type 2 subunit alpha, humanhuman

Predictions only

Length 2,005 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2AQ99250 MIR3192-201ENST00000584920 77 ntBASIC0.71□□□□□ -2.3
SCN2AQ99250 AC087685.1-201ENST00000587507 141 ntBASIC0.71□□□□□ -2.3
SCN2AQ99250 AP000942.4-201ENST00000604811 241 ntBASIC0.71□□□□□ -2.3
SCN2AQ99250 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.71□□□□□ -2.3
SCN2AQ99250 Y_RNA.183-201ENST00000363882 113 ntBASIC0.7□□□□□ -2.3
SCN2AQ99250 RNU6-1048P-201ENST00000364054 107 ntBASIC0.7□□□□□ -2.3
SCN2AQ99250 RNU6-639P-201ENST00000384074 107 ntBASIC0.7□□□□□ -2.3
SCN2AQ99250 RNU6-472P-201ENST00000384299 107 ntBASIC0.7□□□□□ -2.3
SCN2AQ99250 MIR1197-201ENST00000408818 88 ntBASIC0.7□□□□□ -2.3
SCN2AQ99250 RNU6-613P-201ENST00000410412 108 ntBASIC0.7□□□□□ -2.3
SCN2AQ99250 snoU13.21-201ENST00000459368 105 ntBASIC0.7□□□□□ -2.3
SCN2AQ99250 RPL39P28-201ENST00000465655 155 ntBASIC0.7□□□□□ -2.3
SCN2AQ99250 MIR5688-201ENST00000580619 83 ntBASIC0.7□□□□□ -2.3
SCN2AQ99250 MIR4423-201ENST00000580922 80 ntBASIC0.7□□□□□ -2.3
SCN2AQ99250 AL590095.2-201ENST00000604136 117 ntBASIC0.7□□□□□ -2.3
SCN2AQ99250 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.7□□□□□ -2.3
SCN2AQ99250 MIR103A2-201ENST00000362154 78 ntBASIC0.69□□□□□ -2.3
SCN2AQ99250 Y_RNA.16-201ENST00000362421 102 ntBASIC0.69□□□□□ -2.3
SCN2AQ99250 RNU6-770P-201ENST00000363929 105 ntBASIC0.69□□□□□ -2.3
SCN2AQ99250 U8.5-201ENST00000364528 136 ntBASIC0.69□□□□□ -2.3
SCN2AQ99250 Y_RNA.275-201ENST00000364726 110 ntBASIC0.69□□□□□ -2.3
SCN2AQ99250 RNU6-1227P-201ENST00000383981 107 ntBASIC0.69□□□□□ -2.3
SCN2AQ99250 SNORD111-201ENST00000408139 94 ntBASIC0.69□□□□□ -2.3
SCN2AQ99250 MIR1302-7-201ENST00000408841 72 ntBASIC0.69□□□□□ -2.3
SCN2AQ99250 SNRPGP10-201ENST00000432323 225 ntBASIC0.69□□□□□ -2.3
SCN2AQ99250 MTND5P15-201ENST00000434246 349 ntBASIC0.69□□□□□ -2.3
SCN2AQ99250 AL133373.1-201ENST00000497098 94 ntBASIC0.69□□□□□ -2.3
SCN2AQ99250 RNU6-453P-201ENST00000516819 85 ntBASIC0.69□□□□□ -2.3
SCN2AQ99250 MIR1273G-201ENST00000577677 100 ntBASIC0.69□□□□□ -2.3
SCN2AQ99250 AC008507.4-201ENST00000585464 127 ntBASIC0.69□□□□□ -2.3
SCN2AQ99250 SNORD113.3-201ENST00000364630 78 ntBASIC0.69□□□□□ -2.3
SCN2AQ99250 SNORA2.2-201ENST00000365473 135 ntBASIC0.69□□□□□ -2.3
SCN2AQ99250 Y_RNA.363-201ENST00000365529 113 ntBASIC0.69□□□□□ -2.3
SCN2AQ99250 SNORD41-201ENST00000386967 70 ntBASIC0.69□□□□□ -2.3
SCN2AQ99250 MT-TN-201ENST00000387400 73 ntBASIC0.69□□□□□ -2.3
SCN2AQ99250 MIR942-201ENST00000401111 86 ntBASIC0.69□□□□□ -2.3
SCN2AQ99250 AC113618.1-201ENST00000416747 285 ntBASIC0.69□□□□□ -2.3
SCN2AQ99250 MTCYBP6-201ENST00000441810 138 ntBASIC0.69□□□□□ -2.3
SCN2AQ99250 RNU6-1132P-201ENST00000459214 107 ntBASIC0.69□□□□□ -2.3
SCN2AQ99250 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.69□□□□□ -2.3
SCN2AQ99250 SNORA70.22-201ENST00000517160 124 ntBASIC0.69□□□□□ -2.3
SCN2AQ99250 AC243829.6-201ENST00000612652 106 ntBASIC0.69□□□□□ -2.3
SCN2AQ99250 SNORA8.3-201ENST00000384679 139 ntBASIC0.68□□□□□ -2.3
SCN2AQ99250 RNA5SP496-201ENST00000391240 109 ntBASIC0.68□□□□□ -2.3
SCN2AQ99250 AL358176.2-201ENST00000425769 204 ntBASIC0.68□□□□□ -2.3
SCN2AQ99250 RNU11-2P-201ENST00000516898 142 ntBASIC0.68□□□□□ -2.3
SCN2AQ99250 MIR4661-201ENST00000582720 75 ntBASIC0.68□□□□□ -2.3
SCN2AQ99250 AC006504.6-201ENST00000590142 199 ntBASIC0.68□□□□□ -2.3
SCN2AQ99250 BX284668.6-201ENST00000606899 438 ntBASIC0.68□□□□□ -2.3
SCN2AQ99250 MIR4791-201ENST00000607666 84 ntBASIC0.68□□□□□ -2.3
SCN2AQ99250 MIR4251-201ENST00000635819 61 ntBASIC0.68□□□□□ -2.3
SCN2AQ99250 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
SCN2AQ99250 RNU6-102P-201ENST00000384485 104 ntBASIC0.67□□□□□ -2.3
SCN2AQ99250 SNORA80D-201ENST00000384488 135 ntBASIC0.67□□□□□ -2.3
SCN2AQ99250 MIR216A-201ENST00000385063 110 ntBASIC0.67□□□□□ -2.3
SCN2AQ99250 MIR146A-201ENST00000385201 99 ntBASIC0.67□□□□□ -2.3
SCN2AQ99250 SNORD28B-201ENST00000390993 75 ntBASIC0.67□□□□□ -2.3
SCN2AQ99250 SNORD72-201ENST00000390994 80 ntBASIC0.67□□□□□ -2.3
SCN2AQ99250 AL603910.2-201ENST00000407268 136 ntBASIC0.67□□□□□ -2.3
SCN2AQ99250 MTCO2P12-201ENST00000427426 682 ntBASIC0.67□□□□□ -2.3
SCN2AQ99250 RNU7-21P-201ENST00000459430 62 ntBASIC0.67□□□□□ -2.3
SCN2AQ99250 RNU7-25P-201ENST00000516544 62 ntBASIC0.67□□□□□ -2.3
SCN2AQ99250 RNA5SP264-201ENST00000363115 107 ntBASIC0.67□□□□□ -2.3
SCN2AQ99250 Y_RNA.276-201ENST00000364732 109 ntBASIC0.67□□□□□ -2.3
SCN2AQ99250 Y_RNA.634-201ENST00000364811 113 ntBASIC0.67□□□□□ -2.3
SCN2AQ99250 SNORA27.4-201ENST00000516650 95 ntBASIC0.67□□□□□ -2.3
SCN2AQ99250 RNU2-31P-201ENST00000516954 155 ntBASIC0.67□□□□□ -2.3
SCN2AQ99250 AP003716.2-201ENST00000528260 108 ntBASIC0.67□□□□□ -2.3
SCN2AQ99250 AL355297.3-201ENST00000604082 446 ntBASIC0.67□□□□□ -2.3
SCN2AQ99250 MIR6513-201ENST00000621188 64 ntBASIC0.67□□□□□ -2.3
SCN2AQ99250 Y_RNA.64-201ENST00000362845 102 ntBASIC0.66□□□□□ -2.3
SCN2AQ99250 SNORD14E-201ENST00000364009 85 ntBASIC0.66□□□□□ -2.3
SCN2AQ99250 Y_RNA.326-201ENST00000365176 113 ntBASIC0.66□□□□□ -2.3
SCN2AQ99250 MIR570-201ENST00000384917 97 ntBASIC0.66□□□□□ -2.3
SCN2AQ99250 RNU1-119P-201ENST00000391122 165 ntBASIC0.66□□□□□ -2.3
SCN2AQ99250 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.66□□□□□ -2.3
SCN2AQ99250 snoU13.16-201ENST00000459350 104 ntBASIC0.66□□□□□ -2.3
SCN2AQ99250 PRELID3BP2-201ENST00000605362 201 ntBASIC0.66□□□□□ -2.3
SCN2AQ99250 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.66□□□□□ -2.3
SCN2AQ99250 Y_RNA.105-201ENST00000363182 111 ntBASIC0.65□□□□□ -2.3
SCN2AQ99250 Y_RNA.145-201ENST00000363527 102 ntBASIC0.65□□□□□ -2.3
SCN2AQ99250 RNU6-1109P-201ENST00000391187 107 ntBASIC0.65□□□□□ -2.3
SCN2AQ99250 RNY3P15-201ENST00000516297 97 ntBASIC0.65□□□□□ -2.3
SCN2AQ99250 AC019288.1-201ENST00000557918 224 ntBASIC0.65□□□□□ -2.3
SCN2AQ99250 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.65□□□□□ -2.3
SCN2AQ99250 AC006006.1-201ENST00000603082 144 ntBASIC0.65□□□□□ -2.3
SCN2AQ99250 7SK.10-201ENST00000621414 298 ntBASIC0.65□□□□□ -2.3
SCN2AQ99250 MIR6866-201ENST00000638146 69 ntBASIC0.65□□□□□ -2.3
SCN2AQ99250 Y_RNA.19-201ENST00000362462 99 ntBASIC0.65□□□□□ -2.31
SCN2AQ99250 Y_RNA.133-201ENST00000363428 110 ntBASIC0.65□□□□□ -2.31
SCN2AQ99250 RNU6-1205P-201ENST00000363625 106 ntBASIC0.65□□□□□ -2.31
SCN2AQ99250 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.65□□□□□ -2.31
SCN2AQ99250 AP000753.3-201ENST00000604083 169 ntBASIC0.65□□□□□ -2.31
SCN2AQ99250 AC211469.2-201ENST00000605461 205 ntBASIC0.65□□□□□ -2.31
SCN2AQ99250 RNA5SP327-201ENST00000362494 101 ntBASIC0.64□□□□□ -2.31
SCN2AQ99250 RNU6-1272P-201ENST00000362776 107 ntBASIC0.64□□□□□ -2.31
SCN2AQ99250 Y_RNA.66-201ENST00000362862 102 ntBASIC0.64□□□□□ -2.31
SCN2AQ99250 RNU6-1209P-201ENST00000363655 107 ntBASIC0.64□□□□□ -2.31
SCN2AQ99250 SNORD115-28-201ENST00000363931 81 ntBASIC0.64□□□□□ -2.31
SCN2AQ99250 MIR193B-201ENST00000384907 83 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms