Protein–RNA interactions for Protein: Q96QS3

ARX, Homeobox protein ARX, humanhuman

Predictions only

Length 562 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARXQ96QS3 U8.5-201ENST00000364528 136 ntBASIC3.27□□□□□ -1.89
ARXQ96QS3 SNORA1-201ENST00000384107 130 ntBASIC3.27□□□□□ -1.89
ARXQ96QS3 Y_RNA.508-201ENST00000384502 114 ntBASIC3.27□□□□□ -1.89
ARXQ96QS3 SNORA80E-201ENST00000384744 137 ntBASIC3.27□□□□□ -1.89
ARXQ96QS3 RNA5SP445-201ENST00000515889 115 ntBASIC3.27□□□□□ -1.89
ARXQ96QS3 SNORA9.3-201ENST00000516383 129 ntBASIC3.27□□□□□ -1.89
ARXQ96QS3 AL022345.2-201ENST00000606307 135 ntBASIC3.27□□□□□ -1.89
ARXQ96QS3 SNORA28-201ENST00000606769 126 ntBASIC3.27□□□□□ -1.89
ARXQ96QS3 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.27□□□□□ -1.89
ARXQ96QS3 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ARXQ96QS3 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
ARXQ96QS3 HMGN2P32-201ENST00000444648 269 ntBASIC3.26□□□□□ -1.89
ARXQ96QS3 RNU6-113P-201ENST00000516653 101 ntBASIC3.26□□□□□ -1.89
ARXQ96QS3 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.26□□□□□ -1.89
ARXQ96QS3 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.26□□□□□ -1.89
ARXQ96QS3 AP000942.3-201ENST00000603702 160 ntBASIC3.26□□□□□ -1.89
ARXQ96QS3 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
ARXQ96QS3 RNU6-309P-201ENST00000364573 106 ntBASIC3.25□□□□□ -1.89
ARXQ96QS3 Y_RNA.336-201ENST00000365307 109 ntBASIC3.25□□□□□ -1.89
ARXQ96QS3 Y_RNA.346-201ENST00000365385 112 ntBASIC3.25□□□□□ -1.89
ARXQ96QS3 SNORA40.5-201ENST00000391061 128 ntBASIC3.25□□□□□ -1.89
ARXQ96QS3 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.25□□□□□ -1.89
ARXQ96QS3 RNU6-1053P-201ENST00000515930 101 ntBASIC3.25□□□□□ -1.89
ARXQ96QS3 RNU2-60P-201ENST00000517290 128 ntBASIC3.25□□□□□ -1.89
ARXQ96QS3 AC103810.8-201ENST00000607347 118 ntBASIC3.25□□□□□ -1.89
ARXQ96QS3 TP73-AS1.1-201ENST00000611447 161 ntBASIC3.25□□□□□ -1.89
ARXQ96QS3 AC134878.1-201ENST00000619901 243 ntBASIC3.25□□□□□ -1.89
ARXQ96QS3 DEFA7P-201ENST00000382676 285 ntBASIC3.24□□□□□ -1.89
ARXQ96QS3 Y_RNA.410-201ENST00000383992 113 ntBASIC3.24□□□□□ -1.89
ARXQ96QS3 Y_RNA.525-201ENST00000384570 113 ntBASIC3.24□□□□□ -1.89
ARXQ96QS3 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.24□□□□□ -1.89
ARXQ96QS3 AC108729.3-201ENST00000513484 108 ntBASIC3.24□□□□□ -1.89
ARXQ96QS3 AL670379.3-201ENST00000605040 251 ntBASIC3.24□□□□□ -1.89
ARXQ96QS3 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC3.24□□□□□ -1.89
ARXQ96QS3 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.23□□□□□ -1.89
ARXQ96QS3 SNORD58C-201ENST00000365223 64 ntBASIC3.23□□□□□ -1.89
ARXQ96QS3 Y_RNA.466-201ENST00000384294 113 ntBASIC3.23□□□□□ -1.89
ARXQ96QS3 MIR548O-201ENST00000408583 114 ntBASIC3.23□□□□□ -1.89
ARXQ96QS3 AL021397.1-201ENST00000451806 248 ntBASIC3.23□□□□□ -1.89
ARXQ96QS3 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ARXQ96QS3 MIR4781-201ENST00000585250 76 ntBASIC3.23□□□□□ -1.89
ARXQ96QS3 AC006441.5-201ENST00000612680 209 ntBASIC3.23□□□□□ -1.89
ARXQ96QS3 MTND5P32-201ENST00000560711 1802 ntBASIC3.23□□□□□ -1.89
ARXQ96QS3 SNORA25.6-201ENST00000364121 118 ntBASIC3.22□□□□□ -1.89
ARXQ96QS3 MIR548A3-201ENST00000385297 97 ntBASIC3.22□□□□□ -1.89
ARXQ96QS3 Y_RNA.617-201ENST00000410920 90 ntBASIC3.22□□□□□ -1.89
ARXQ96QS3 RPS12P2-201ENST00000439728 269 ntBASIC3.22□□□□□ -1.89
ARXQ96QS3 JTBP1-201ENST00000441314 247 ntBASIC3.22□□□□□ -1.89
ARXQ96QS3 snoU13.9-201ENST00000458927 103 ntBASIC3.22□□□□□ -1.89
ARXQ96QS3 MIR4498-201ENST00000577599 66 ntBASIC3.22□□□□□ -1.89
ARXQ96QS3 MIR6129-201ENST00000616087 109 ntBASIC3.22□□□□□ -1.89
ARXQ96QS3 AL121890.5-201ENST00000620848 304 ntBASIC3.22□□□□□ -1.89
ARXQ96QS3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
ARXQ96QS3 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
ARXQ96QS3 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
ARXQ96QS3 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC3.21□□□□□ -1.9
ARXQ96QS3 RNU6-439P-201ENST00000384188 106 ntBASIC3.21□□□□□ -1.9
ARXQ96QS3 AC079804.2-201ENST00000490376 200 ntBASIC3.21□□□□□ -1.9
ARXQ96QS3 SNORD45.4-201ENST00000516629 73 ntBASIC3.21□□□□□ -1.9
ARXQ96QS3 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC3.21□□□□□ -1.9
ARXQ96QS3 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
ARXQ96QS3 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
ARXQ96QS3 Y_RNA.355-201ENST00000365462 98 ntBASIC3.2□□□□□ -1.9
ARXQ96QS3 MIR518F-201ENST00000384973 87 ntBASIC3.2□□□□□ -1.9
ARXQ96QS3 SNORD77.3-201ENST00000391113 65 ntBASIC3.2□□□□□ -1.9
ARXQ96QS3 AL034345.1-201ENST00000407768 123 ntBASIC3.2□□□□□ -1.9
ARXQ96QS3 AC234781.5-201ENST00000508429 271 ntBASIC3.2□□□□□ -1.9
ARXQ96QS3 AC008834.1-201ENST00000511612 175 ntBASIC3.2□□□□□ -1.9
ARXQ96QS3 RN7SKP19-201ENST00000516016 252 ntBASIC3.2□□□□□ -1.9
ARXQ96QS3 RNU6-1149P-201ENST00000516810 97 ntBASIC3.2□□□□□ -1.9
ARXQ96QS3 RNU7-70P-201ENST00000516941 66 ntBASIC3.2□□□□□ -1.9
ARXQ96QS3 MIR8054-201ENST00000620877 86 ntBASIC3.2□□□□□ -1.9
ARXQ96QS3 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
ARXQ96QS3 RNU6-1189P-201ENST00000383958 107 ntBASIC3.19□□□□□ -1.9
ARXQ96QS3 MIR548A2-201ENST00000384956 97 ntBASIC3.19□□□□□ -1.9
ARXQ96QS3 RNU6-440P-201ENST00000390882 105 ntBASIC3.19□□□□□ -1.9
ARXQ96QS3 Y_RNA.709-201ENST00000516952 92 ntBASIC3.19□□□□□ -1.9
ARXQ96QS3 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC3.19□□□□□ -1.9
ARXQ96QS3 MIR5197-201ENST00000583721 112 ntBASIC3.19□□□□□ -1.9
ARXQ96QS3 AC025166.1-201ENST00000612411 163 ntBASIC3.19□□□□□ -1.9
ARXQ96QS3 SNORD115-28-201ENST00000363931 81 ntBASIC3.18□□□□□ -1.9
ARXQ96QS3 SNORA4.2-201ENST00000365313 147 ntBASIC3.18□□□□□ -1.9
ARXQ96QS3 HMGN2P38-201ENST00000423806 265 ntBASIC3.18□□□□□ -1.9
ARXQ96QS3 AC245517.4-201ENST00000448601 281 ntBASIC3.18□□□□□ -1.9
ARXQ96QS3 RNA5SP281-201ENST00000516504 135 ntBASIC3.18□□□□□ -1.9
ARXQ96QS3 SNORD38C-201ENST00000384381 69 ntBASIC3.17□□□□□ -1.9
ARXQ96QS3 RNU6-429P-201ENST00000384582 108 ntBASIC3.17□□□□□ -1.9
ARXQ96QS3 STAG3L5P-204ENST00000443759 179 ntBASIC3.17□□□□□ -1.9
ARXQ96QS3 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC3.17□□□□□ -1.9
ARXQ96QS3 CYCTP-201ENST00000504253 315 ntBASIC3.17□□□□□ -1.9
ARXQ96QS3 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC3.17□□□□□ -1.9
ARXQ96QS3 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.17□□□□□ -1.9
ARXQ96QS3 RNA5SP236-201ENST00000516169 116 ntBASIC3.17□□□□□ -1.9
ARXQ96QS3 AL137847.3-201ENST00000611521 109 ntBASIC3.17□□□□□ -1.9
ARXQ96QS3 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.17□□□□□ -1.9
ARXQ96QS3 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
ARXQ96QS3 RNU6-268P-201ENST00000364174 107 ntBASIC3.16□□□□□ -1.9
ARXQ96QS3 RNU6-153P-201ENST00000364422 104 ntBASIC3.16□□□□□ -1.9
ARXQ96QS3 RNU6-163P-201ENST00000384396 106 ntBASIC3.16□□□□□ -1.9
ARXQ96QS3 AL359511.1-201ENST00000402970 211 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 8.4 ms