Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 Y_RNA.651-201ENST00000459380 103 ntBASIC2.01□□□□□ -2.09
PDLIM2Q96JY6 RNU6-1149P-201ENST00000516810 97 ntBASIC2.01□□□□□ -2.09
PDLIM2Q96JY6 MIR8054-201ENST00000620877 86 ntBASIC2.01□□□□□ -2.09
PDLIM2Q96JY6 RNU6-268P-201ENST00000364174 107 ntBASIC2□□□□□ -2.09
PDLIM2Q96JY6 SNORD58C-201ENST00000365223 64 ntBASIC2□□□□□ -2.09
PDLIM2Q96JY6 SNORA64-201ENST00000384674 134 ntBASIC2□□□□□ -2.09
PDLIM2Q96JY6 Y_RNA.617-201ENST00000410920 90 ntBASIC2□□□□□ -2.09
PDLIM2Q96JY6 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2□□□□□ -2.09
PDLIM2Q96JY6 AL445646.1-201ENST00000431784 216 ntBASIC2□□□□□ -2.09
PDLIM2Q96JY6 RNU6-781P-201ENST00000516377 101 ntBASIC2□□□□□ -2.09
PDLIM2Q96JY6 RNU7-25P-201ENST00000516544 62 ntBASIC2□□□□□ -2.09
PDLIM2Q96JY6 RNA5SP137-201ENST00000516833 135 ntBASIC2□□□□□ -2.09
PDLIM2Q96JY6 AC108081.1-201ENST00000604358 221 ntBASIC2□□□□□ -2.09
PDLIM2Q96JY6 AC006441.5-201ENST00000612680 209 ntBASIC2□□□□□ -2.09
PDLIM2Q96JY6 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2□□□□□ -2.09
PDLIM2Q96JY6 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.99□□□□□ -2.09
PDLIM2Q96JY6 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.99□□□□□ -2.09
PDLIM2Q96JY6 RN7SKP19-201ENST00000516016 252 ntBASIC1.99□□□□□ -2.09
PDLIM2Q96JY6 RNU1-41P-201ENST00000516161 162 ntBASIC1.99□□□□□ -2.09
PDLIM2Q96JY6 RNA5SP236-201ENST00000516169 116 ntBASIC1.99□□□□□ -2.09
PDLIM2Q96JY6 SNORD33.1-201ENST00000516213 88 ntBASIC1.99□□□□□ -2.09
PDLIM2Q96JY6 RNU1-48P-201ENST00000516400 162 ntBASIC1.99□□□□□ -2.09
PDLIM2Q96JY6 MIR4648-201ENST00000580107 72 ntBASIC1.99□□□□□ -2.09
PDLIM2Q96JY6 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.99□□□□□ -2.09
PDLIM2Q96JY6 AC134878.1-201ENST00000619901 243 ntBASIC1.99□□□□□ -2.09
PDLIM2Q96JY6 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
PDLIM2Q96JY6 Y_RNA.336-201ENST00000365307 109 ntBASIC1.98□□□□□ -2.09
PDLIM2Q96JY6 SNORA67.3-201ENST00000384366 140 ntBASIC1.98□□□□□ -2.09
PDLIM2Q96JY6 RNU6-163P-201ENST00000384396 106 ntBASIC1.98□□□□□ -2.09
PDLIM2Q96JY6 Y_RNA.547-201ENST00000384654 119 ntBASIC1.98□□□□□ -2.09
PDLIM2Q96JY6 RPL31P63-201ENST00000422565 375 ntBASIC1.98□□□□□ -2.09
PDLIM2Q96JY6 MIR3618-201ENST00000580330 88 ntBASIC1.98□□□□□ -2.09
PDLIM2Q96JY6 SNORA28-201ENST00000606769 126 ntBASIC1.98□□□□□ -2.09
PDLIM2Q96JY6 MIR376A2-201ENST00000636782 80 ntBASIC1.98□□□□□ -2.09
PDLIM2Q96JY6 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
PDLIM2Q96JY6 SNORD115-28-201ENST00000363931 81 ntBASIC1.97□□□□□ -2.09
PDLIM2Q96JY6 SNORA2.2-201ENST00000365473 135 ntBASIC1.97□□□□□ -2.09
PDLIM2Q96JY6 RNU6-1189P-201ENST00000383958 107 ntBASIC1.97□□□□□ -2.09
PDLIM2Q96JY6 Y_RNA.410-201ENST00000383992 113 ntBASIC1.97□□□□□ -2.09
PDLIM2Q96JY6 MIR548A3-201ENST00000385297 97 ntBASIC1.97□□□□□ -2.09
PDLIM2Q96JY6 RNY4P18-201ENST00000391107 89 ntBASIC1.97□□□□□ -2.09
PDLIM2Q96JY6 SNORD23.1-201ENST00000408212 104 ntBASIC1.97□□□□□ -2.09
PDLIM2Q96JY6 HMGN2P3-201ENST00000433603 273 ntBASIC1.97□□□□□ -2.09
PDLIM2Q96JY6 SNRPGP14-201ENST00000435400 219 ntBASIC1.97□□□□□ -2.09
PDLIM2Q96JY6 HMGN2P5-201ENST00000436882 273 ntBASIC1.97□□□□□ -2.09
PDLIM2Q96JY6 AC069257.2-201ENST00000441819 155 ntBASIC1.97□□□□□ -2.09
PDLIM2Q96JY6 HMGN2P32-201ENST00000444648 269 ntBASIC1.97□□□□□ -2.09
PDLIM2Q96JY6 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.97□□□□□ -2.09
PDLIM2Q96JY6 AC114811.1-201ENST00000507207 168 ntBASIC1.97□□□□□ -2.09
PDLIM2Q96JY6 SNORA31.10-201ENST00000516482 106 ntBASIC1.97□□□□□ -2.09
PDLIM2Q96JY6 SCARNA15-202ENST00000516881 127 ntBASIC1.97□□□□□ -2.09
PDLIM2Q96JY6 RNU6-1116P-201ENST00000517269 99 ntBASIC1.97□□□□□ -2.09
PDLIM2Q96JY6 MIR5197-201ENST00000583721 112 ntBASIC1.97□□□□□ -2.09
PDLIM2Q96JY6 AL096840.1-201ENST00000603287 93 ntBASIC1.97□□□□□ -2.09
PDLIM2Q96JY6 AL670379.3-201ENST00000605040 251 ntBASIC1.97□□□□□ -2.09
PDLIM2Q96JY6 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.97□□□□□ -2.09
PDLIM2Q96JY6 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.97□□□□□ -2.09
PDLIM2Q96JY6 AL121890.5-201ENST00000620848 304 ntBASIC1.97□□□□□ -2.09
PDLIM2Q96JY6 ZNF355P-201ENST00000427301 3216 ntBASIC1.97□□□□□ -2.09
PDLIM2Q96JY6 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.96□□□□□ -2.09
PDLIM2Q96JY6 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
PDLIM2Q96JY6 Y_RNA.37-201ENST00000362606 108 ntBASIC1.96□□□□□ -2.1
PDLIM2Q96JY6 SNORA63.4-201ENST00000362763 126 ntBASIC1.96□□□□□ -2.1
PDLIM2Q96JY6 Y_RNA.346-201ENST00000365385 112 ntBASIC1.96□□□□□ -2.1
PDLIM2Q96JY6 MIR518A2-201ENST00000384966 87 ntBASIC1.96□□□□□ -2.1
PDLIM2Q96JY6 MIR1263-201ENST00000408324 86 ntBASIC1.96□□□□□ -2.1
PDLIM2Q96JY6 RN7SKP200-201ENST00000410564 320 ntBASIC1.96□□□□□ -2.1
PDLIM2Q96JY6 RPS29P11-201ENST00000496507 171 ntBASIC1.96□□□□□ -2.1
PDLIM2Q96JY6 Y_RNA.709-201ENST00000516952 92 ntBASIC1.96□□□□□ -2.1
PDLIM2Q96JY6 AC025166.1-201ENST00000612411 163 ntBASIC1.96□□□□□ -2.1
PDLIM2Q96JY6 AC015726.2-201ENST00000620112 122 ntBASIC1.96□□□□□ -2.1
PDLIM2Q96JY6 MIR219B-201ENST00000637023 88 ntBASIC1.96□□□□□ -2.1
PDLIM2Q96JY6 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
PDLIM2Q96JY6 RNU6-153P-201ENST00000364422 104 ntBASIC1.95□□□□□ -2.1
PDLIM2Q96JY6 MIR1283-2-201ENST00000408621 87 ntBASIC1.95□□□□□ -2.1
PDLIM2Q96JY6 CYCTP-201ENST00000504253 315 ntBASIC1.95□□□□□ -2.1
PDLIM2Q96JY6 PDCD5P2-201ENST00000507570 312 ntBASIC1.95□□□□□ -2.1
PDLIM2Q96JY6 RNVU1-2-201ENST00000516326 135 ntBASIC1.95□□□□□ -2.1
PDLIM2Q96JY6 RNU6-113P-201ENST00000516653 101 ntBASIC1.95□□□□□ -2.1
PDLIM2Q96JY6 IGKV1-22-201ENST00000524313 326 ntBASIC1.95□□□□□ -2.1
PDLIM2Q96JY6 MTND5P18-201ENST00000445624 1801 ntBASIC1.94□□□□□ -2.1
PDLIM2Q96JY6 SNORA22-201ENST00000383907 134 ntBASIC1.94□□□□□ -2.1
PDLIM2Q96JY6 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
PDLIM2Q96JY6 RNA5SP465-201ENST00000391195 109 ntBASIC1.94□□□□□ -2.1
PDLIM2Q96JY6 HMGN2P39-201ENST00000398005 273 ntBASIC1.94□□□□□ -2.1
PDLIM2Q96JY6 HSPE1P9-201ENST00000440046 311 ntBASIC1.94□□□□□ -2.1
PDLIM2Q96JY6 Y_RNA.649-201ENST00000459077 103 ntBASIC1.94□□□□□ -2.1
PDLIM2Q96JY6 SNORD36C-201ENST00000516733 66 ntBASIC1.94□□□□□ -2.1
PDLIM2Q96JY6 RNU7-70P-201ENST00000516941 66 ntBASIC1.94□□□□□ -2.1
PDLIM2Q96JY6 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.94□□□□□ -2.1
PDLIM2Q96JY6 MIRLET7C-201ENST00000362160 84 ntBASIC1.93□□□□□ -2.1
PDLIM2Q96JY6 SNORA4.2-201ENST00000365313 147 ntBASIC1.93□□□□□ -2.1
PDLIM2Q96JY6 SNORD38C-201ENST00000384381 69 ntBASIC1.93□□□□□ -2.1
PDLIM2Q96JY6 SNORD116-21-201ENST00000384507 92 ntBASIC1.93□□□□□ -2.1
PDLIM2Q96JY6 MIR548A1-201ENST00000385041 97 ntBASIC1.93□□□□□ -2.1
PDLIM2Q96JY6 MIRLET7F2-201ENST00000385277 83 ntBASIC1.93□□□□□ -2.1
PDLIM2Q96JY6 AL034345.1-201ENST00000407768 123 ntBASIC1.93□□□□□ -2.1
PDLIM2Q96JY6 CALM2P4-201ENST00000430810 426 ntBASIC1.93□□□□□ -2.1
PDLIM2Q96JY6 RNU6-589P-201ENST00000516485 107 ntBASIC1.93□□□□□ -2.1
PDLIM2Q96JY6 AL137067.1-201ENST00000615933 120 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 205.1 ms