Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 RNU6-268P-201ENST00000364174 107 ntBASIC1.18□□□□□ -2.22
PDLIM5Q96HC4 Y_RNA.238-201ENST00000364441 102 ntBASIC1.18□□□□□ -2.22
PDLIM5Q96HC4 RNU6-1318P-201ENST00000365389 103 ntBASIC1.18□□□□□ -2.22
PDLIM5Q96HC4 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
PDLIM5Q96HC4 AL451046.2-201ENST00000403074 277 ntBASIC1.18□□□□□ -2.22
PDLIM5Q96HC4 RNU6-847P-201ENST00000411115 108 ntBASIC1.18□□□□□ -2.22
PDLIM5Q96HC4 RNU2-55P-201ENST00000411146 174 ntBASIC1.18□□□□□ -2.22
PDLIM5Q96HC4 AP1B1P2-201ENST00000416196 106 ntBASIC1.18□□□□□ -2.22
PDLIM5Q96HC4 AC009474.2-201ENST00000451383 136 ntBASIC1.18□□□□□ -2.22
PDLIM5Q96HC4 AL133373.1-201ENST00000497098 94 ntBASIC1.18□□□□□ -2.22
PDLIM5Q96HC4 RNU6-138P-201ENST00000515952 107 ntBASIC1.18□□□□□ -2.22
PDLIM5Q96HC4 RN7SKP164-201ENST00000516138 266 ntBASIC1.18□□□□□ -2.22
PDLIM5Q96HC4 RNU6-917P-201ENST00000516294 104 ntBASIC1.18□□□□□ -2.22
PDLIM5Q96HC4 RNU6-922P-201ENST00000516753 99 ntBASIC1.18□□□□□ -2.22
PDLIM5Q96HC4 AC090821.2-201ENST00000523552 176 ntBASIC1.18□□□□□ -2.22
PDLIM5Q96HC4 MIR4744-201ENST00000581563 82 ntBASIC1.18□□□□□ -2.22
PDLIM5Q96HC4 AL357312.1-201ENST00000603879 298 ntBASIC1.18□□□□□ -2.22
PDLIM5Q96HC4 AL022345.2-201ENST00000606307 135 ntBASIC1.18□□□□□ -2.22
PDLIM5Q96HC4 AC006441.5-201ENST00000612680 209 ntBASIC1.18□□□□□ -2.22
PDLIM5Q96HC4 Y_RNA.121-201ENST00000363309 113 ntBASIC1.17□□□□□ -2.22
PDLIM5Q96HC4 RNU6-103P-201ENST00000363686 107 ntBASIC1.17□□□□□ -2.22
PDLIM5Q96HC4 Y_RNA.297-201ENST00000364950 91 ntBASIC1.17□□□□□ -2.22
PDLIM5Q96HC4 RNU6-484P-201ENST00000384016 107 ntBASIC1.17□□□□□ -2.22
PDLIM5Q96HC4 Y_RNA.435-201ENST00000384095 112 ntBASIC1.17□□□□□ -2.22
PDLIM5Q96HC4 Y_RNA.571-201ENST00000384753 98 ntBASIC1.17□□□□□ -2.22
PDLIM5Q96HC4 AC108059.2-201ENST00000434626 151 ntBASIC1.17□□□□□ -2.22
PDLIM5Q96HC4 AC023449.1-201ENST00000454464 154 ntBASIC1.17□□□□□ -2.22
PDLIM5Q96HC4 Y_RNA.644-201ENST00000459006 113 ntBASIC1.17□□□□□ -2.22
PDLIM5Q96HC4 RN7SKP179-201ENST00000516126 217 ntBASIC1.17□□□□□ -2.22
PDLIM5Q96HC4 Y_RNA.674-201ENST00000516362 113 ntBASIC1.17□□□□□ -2.22
PDLIM5Q96HC4 RNU6-1007P-201ENST00000516586 107 ntBASIC1.17□□□□□ -2.22
PDLIM5Q96HC4 RNA5SP404-201ENST00000517118 132 ntBASIC1.17□□□□□ -2.22
PDLIM5Q96HC4 AC090142.3-201ENST00000519012 385 ntBASIC1.17□□□□□ -2.22
PDLIM5Q96HC4 Z83818.1-201ENST00000603584 150 ntBASIC1.17□□□□□ -2.22
PDLIM5Q96HC4 AC090425.1-201ENST00000610007 140 ntBASIC1.17□□□□□ -2.22
PDLIM5Q96HC4 SNORD14E-201ENST00000364009 85 ntBASIC1.16□□□□□ -2.22
PDLIM5Q96HC4 RNU6-442P-201ENST00000383968 104 ntBASIC1.16□□□□□ -2.22
PDLIM5Q96HC4 RNU6-578P-201ENST00000390980 103 ntBASIC1.16□□□□□ -2.22
PDLIM5Q96HC4 HMGN2P32-201ENST00000444648 269 ntBASIC1.16□□□□□ -2.22
PDLIM5Q96HC4 RPL39P39-201ENST00000455840 151 ntBASIC1.16□□□□□ -2.22
PDLIM5Q96HC4 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.16□□□□□ -2.22
PDLIM5Q96HC4 AC022559.1-201ENST00000520905 205 ntBASIC1.16□□□□□ -2.22
PDLIM5Q96HC4 AC090049.2-201ENST00000550377 109 ntBASIC1.16□□□□□ -2.22
PDLIM5Q96HC4 RNU2-4P-201ENST00000606190 192 ntBASIC1.16□□□□□ -2.22
PDLIM5Q96HC4 AC108706.1-201ENST00000611053 297 ntBASIC1.16□□□□□ -2.22
PDLIM5Q96HC4 AL353770.2-201ENST00000620024 78 ntBASIC1.16□□□□□ -2.22
PDLIM5Q96HC4 SNORA2.2-201ENST00000365473 135 ntBASIC1.15□□□□□ -2.23
PDLIM5Q96HC4 Y_RNA.785-201ENST00000384290 109 ntBASIC1.15□□□□□ -2.23
PDLIM5Q96HC4 RNU6-482P-201ENST00000391068 107 ntBASIC1.15□□□□□ -2.23
PDLIM5Q96HC4 Y_RNA.622-201ENST00000411091 108 ntBASIC1.15□□□□□ -2.23
PDLIM5Q96HC4 BTF3P4-201ENST00000418852 495 ntBASIC1.15□□□□□ -2.23
PDLIM5Q96HC4 RNU6-830P-201ENST00000516353 107 ntBASIC1.15□□□□□ -2.23
PDLIM5Q96HC4 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.15□□□□□ -2.23
PDLIM5Q96HC4 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.15□□□□□ -2.23
PDLIM5Q96HC4 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
PDLIM5Q96HC4 RNU6-1020P-201ENST00000363684 107 ntBASIC1.14□□□□□ -2.23
PDLIM5Q96HC4 SNORD45.3-201ENST00000363836 72 ntBASIC1.14□□□□□ -2.23
PDLIM5Q96HC4 MIR452-201ENST00000385020 85 ntBASIC1.14□□□□□ -2.23
PDLIM5Q96HC4 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.14□□□□□ -2.23
PDLIM5Q96HC4 RNU4-43P-201ENST00000410628 137 ntBASIC1.14□□□□□ -2.23
PDLIM5Q96HC4 AL591704.2-201ENST00000421658 181 ntBASIC1.14□□□□□ -2.23
PDLIM5Q96HC4 AL138752.1-201ENST00000452964 351 ntBASIC1.14□□□□□ -2.23
PDLIM5Q96HC4 Y_RNA.666-201ENST00000516187 112 ntBASIC1.14□□□□□ -2.23
PDLIM5Q96HC4 RNU6-1299P-201ENST00000516316 100 ntBASIC1.14□□□□□ -2.23
PDLIM5Q96HC4 RNA5SP153-201ENST00000516498 76 ntBASIC1.14□□□□□ -2.23
PDLIM5Q96HC4 Y_RNA.700-201ENST00000516806 100 ntBASIC1.14□□□□□ -2.23
PDLIM5Q96HC4 RNU6-165P-201ENST00000517170 99 ntBASIC1.14□□□□□ -2.23
PDLIM5Q96HC4 AC007751.1-201ENST00000529260 376 ntBASIC1.14□□□□□ -2.23
PDLIM5Q96HC4 AC109810.1-201ENST00000534066 224 ntBASIC1.14□□□□□ -2.23
PDLIM5Q96HC4 MIR4662B-201ENST00000579498 81 ntBASIC1.14□□□□□ -2.23
PDLIM5Q96HC4 FAM106DP-201ENST00000586416 501 ntBASIC1.14□□□□□ -2.23
PDLIM5Q96HC4 AC012676.2-201ENST00000619258 186 ntBASIC1.14□□□□□ -2.23
PDLIM5Q96HC4 AC027335.2-201ENST00000624030 375 ntBASIC1.14□□□□□ -2.23
PDLIM5Q96HC4 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.14□□□□□ -2.23
PDLIM5Q96HC4 U6.106-201ENST00000636360 105 ntBASIC1.14□□□□□ -2.23
PDLIM5Q96HC4 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
PDLIM5Q96HC4 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
PDLIM5Q96HC4 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.13□□□□□ -2.23
PDLIM5Q96HC4 Y_RNA.66-201ENST00000362862 102 ntBASIC1.13□□□□□ -2.23
PDLIM5Q96HC4 Y_RNA.75-201ENST00000362927 97 ntBASIC1.13□□□□□ -2.23
PDLIM5Q96HC4 Y_RNA.91-201ENST00000363042 107 ntBASIC1.13□□□□□ -2.23
PDLIM5Q96HC4 Y_RNA.233-201ENST00000364407 101 ntBASIC1.13□□□□□ -2.23
PDLIM5Q96HC4 Y_RNA.242-201ENST00000364473 110 ntBASIC1.13□□□□□ -2.23
PDLIM5Q96HC4 Y_RNA.634-201ENST00000364811 113 ntBASIC1.13□□□□□ -2.23
PDLIM5Q96HC4 RNU6-728P-201ENST00000365375 104 ntBASIC1.13□□□□□ -2.23
PDLIM5Q96HC4 Y_RNA.412-201ENST00000384001 104 ntBASIC1.13□□□□□ -2.23
PDLIM5Q96HC4 SNORD61-201ENST00000384252 73 ntBASIC1.13□□□□□ -2.23
PDLIM5Q96HC4 RNU4-70P-201ENST00000384579 139 ntBASIC1.13□□□□□ -2.23
PDLIM5Q96HC4 MIR516B2-201ENST00000385190 85 ntBASIC1.13□□□□□ -2.23
PDLIM5Q96HC4 SNORD41-201ENST00000386967 70 ntBASIC1.13□□□□□ -2.23
PDLIM5Q96HC4 SNORA31.2-201ENST00000516019 134 ntBASIC1.13□□□□□ -2.23
PDLIM5Q96HC4 RNU6-947P-201ENST00000516264 106 ntBASIC1.13□□□□□ -2.23
PDLIM5Q96HC4 MIR4524B-201ENST00000581569 115 ntBASIC1.13□□□□□ -2.23
PDLIM5Q96HC4 AC097639.2-201ENST00000603159 172 ntBASIC1.13□□□□□ -2.23
PDLIM5Q96HC4 AP000942.3-201ENST00000603702 160 ntBASIC1.13□□□□□ -2.23
PDLIM5Q96HC4 AC004792.1-201ENST00000614523 137 ntBASIC1.13□□□□□ -2.23
PDLIM5Q96HC4 Y_RNA.29-201ENST00000362570 113 ntBASIC1.12□□□□□ -2.23
PDLIM5Q96HC4 RNU1-124P-201ENST00000363861 145 ntBASIC1.12□□□□□ -2.23
PDLIM5Q96HC4 Y_RNA.182-201ENST00000363880 111 ntBASIC1.12□□□□□ -2.23
PDLIM5Q96HC4 Y_RNA.547-201ENST00000384654 119 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms