Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 Y_RNA.569-201ENST00000384749 103 ntBASIC0.46□□□□□ -2.34
PTP4A1Q93096 RNU6-308P-201ENST00000390957 107 ntBASIC0.46□□□□□ -2.34
PTP4A1Q93096 MIR4771-2-201ENST00000577758 74 ntBASIC0.46□□□□□ -2.34
PTP4A1Q93096 MIR4771-1-201ENST00000582617 74 ntBASIC0.46□□□□□ -2.34
PTP4A1Q93096 C8orf59P2-201ENST00000603441 271 ntBASIC0.46□□□□□ -2.34
PTP4A1Q93096 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.45□□□□□ -2.34
PTP4A1Q93096 RNA5SP347-201ENST00000362445 119 ntBASIC0.45□□□□□ -2.34
PTP4A1Q93096 Y_RNA.183-201ENST00000363882 113 ntBASIC0.45□□□□□ -2.34
PTP4A1Q93096 RNA5SP499-201ENST00000363982 119 ntBASIC0.45□□□□□ -2.34
PTP4A1Q93096 RNU6-1138P-201ENST00000365359 106 ntBASIC0.45□□□□□ -2.34
PTP4A1Q93096 SNORA24-201ENST00000384096 131 ntBASIC0.45□□□□□ -2.34
PTP4A1Q93096 SNORD38B-201ENST00000384690 67 ntBASIC0.45□□□□□ -2.34
PTP4A1Q93096 Y_RNA.579-201ENST00000390939 94 ntBASIC0.45□□□□□ -2.34
PTP4A1Q93096 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.45□□□□□ -2.34
PTP4A1Q93096 AC092628.1-201ENST00000436250 252 ntBASIC0.45□□□□□ -2.34
PTP4A1Q93096 RNU7-62P-201ENST00000458856 62 ntBASIC0.45□□□□□ -2.34
PTP4A1Q93096 RNU6-764P-201ENST00000516396 105 ntBASIC0.45□□□□□ -2.34
PTP4A1Q93096 MIR4724-201ENST00000579485 89 ntBASIC0.45□□□□□ -2.34
PTP4A1Q93096 PART1_1.1-201ENST00000611761 217 ntBASIC0.45□□□□□ -2.34
PTP4A1Q93096 SNORD38B-202ENST00000625943 69 ntBASIC0.45□□□□□ -2.34
PTP4A1Q93096 Y_RNA.58-201ENST00000362807 102 ntBASIC0.44□□□□□ -2.34
PTP4A1Q93096 Y_RNA.154-201ENST00000363624 102 ntBASIC0.44□□□□□ -2.34
PTP4A1Q93096 RNY3P1-201ENST00000365085 102 ntBASIC0.44□□□□□ -2.34
PTP4A1Q93096 Y_RNA.431-201ENST00000384086 102 ntBASIC0.44□□□□□ -2.34
PTP4A1Q93096 RNU6-514P-201ENST00000384208 107 ntBASIC0.44□□□□□ -2.34
PTP4A1Q93096 RNU6-125P-201ENST00000384505 107 ntBASIC0.44□□□□□ -2.34
PTP4A1Q93096 RNU6-763P-201ENST00000390865 106 ntBASIC0.44□□□□□ -2.34
PTP4A1Q93096 Y_RNA.602-201ENST00000410535 92 ntBASIC0.44□□□□□ -2.34
PTP4A1Q93096 RNU6-130P-201ENST00000411112 103 ntBASIC0.44□□□□□ -2.34
PTP4A1Q93096 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.44□□□□□ -2.34
PTP4A1Q93096 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.44□□□□□ -2.34
PTP4A1Q93096 MTND3P22-201ENST00000510932 243 ntBASIC0.44□□□□□ -2.34
PTP4A1Q93096 RNU7-53P-201ENST00000516705 60 ntBASIC0.44□□□□□ -2.34
PTP4A1Q93096 AC124312.5-201ENST00000604451 268 ntBASIC0.44□□□□□ -2.34
PTP4A1Q93096 AC013791.1-201ENST00000616619 62 ntBASIC0.44□□□□□ -2.34
PTP4A1Q93096 AC112487.2-201ENST00000637950 304 ntBASIC0.44□□□□□ -2.34
PTP4A1Q93096 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
PTP4A1Q93096 SNORD18A-201ENST00000363753 72 ntBASIC0.43□□□□□ -2.34
PTP4A1Q93096 SNORD45.3-201ENST00000363836 72 ntBASIC0.43□□□□□ -2.34
PTP4A1Q93096 Y_RNA.418-201ENST00000384029 102 ntBASIC0.43□□□□□ -2.34
PTP4A1Q93096 RNU6-342P-201ENST00000384521 104 ntBASIC0.43□□□□□ -2.34
PTP4A1Q93096 SNORD83.1-201ENST00000411362 77 ntBASIC0.43□□□□□ -2.34
PTP4A1Q93096 AC010655.3-201ENST00000478818 450 ntBASIC0.43□□□□□ -2.34
PTP4A1Q93096 AC090971.5-201ENST00000621102 293 ntBASIC0.43□□□□□ -2.34
PTP4A1Q93096 SNORD115-28-201ENST00000363931 81 ntBASIC0.42□□□□□ -2.34
PTP4A1Q93096 RNU6-42P-201ENST00000384165 107 ntBASIC0.42□□□□□ -2.34
PTP4A1Q93096 SNORA53-201ENST00000391141 249 ntBASIC0.42□□□□□ -2.34
PTP4A1Q93096 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.42□□□□□ -2.34
PTP4A1Q93096 RNA5SP247-201ENST00000411181 105 ntBASIC0.42□□□□□ -2.34
PTP4A1Q93096 AC114737.2-201ENST00000421583 173 ntBASIC0.42□□□□□ -2.34
PTP4A1Q93096 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.42□□□□□ -2.34
PTP4A1Q93096 RNU6-1046P-201ENST00000516538 107 ntBASIC0.42□□□□□ -2.34
PTP4A1Q93096 Y_RNA.721-201ENST00000517207 102 ntBASIC0.42□□□□□ -2.34
PTP4A1Q93096 MIR548S-201ENST00000581352 82 ntBASIC0.42□□□□□ -2.34
PTP4A1Q93096 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
PTP4A1Q93096 AC090625.1-201ENST00000357130 210 ntBASIC0.41□□□□□ -2.34
PTP4A1Q93096 RNU6-369P-201ENST00000362515 102 ntBASIC0.41□□□□□ -2.34
PTP4A1Q93096 Y_RNA.116-201ENST00000363292 103 ntBASIC0.41□□□□□ -2.34
PTP4A1Q93096 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
PTP4A1Q93096 SNORA40.5-201ENST00000391061 128 ntBASIC0.41□□□□□ -2.34
PTP4A1Q93096 MIR18B-201ENST00000454574 71 ntBASIC0.41□□□□□ -2.34
PTP4A1Q93096 RNU7-73P-201ENST00000458743 63 ntBASIC0.41□□□□□ -2.34
PTP4A1Q93096 MRPS35P2-201ENST00000508242 191 ntBASIC0.41□□□□□ -2.34
PTP4A1Q93096 RNU6-496P-201ENST00000516145 99 ntBASIC0.41□□□□□ -2.34
PTP4A1Q93096 RNU6-958P-201ENST00000516995 106 ntBASIC0.41□□□□□ -2.34
PTP4A1Q93096 MIR5692C2-201ENST00000577959 77 ntBASIC0.41□□□□□ -2.34
PTP4A1Q93096 MIR3612-201ENST00000579753 87 ntBASIC0.41□□□□□ -2.34
PTP4A1Q93096 MIR4804-201ENST00000581683 73 ntBASIC0.41□□□□□ -2.34
PTP4A1Q93096 MIR4676-201ENST00000583078 72 ntBASIC0.41□□□□□ -2.34
PTP4A1Q93096 SNORA4-201ENST00000584302 138 ntBASIC0.41□□□□□ -2.34
PTP4A1Q93096 AL049861.1-201ENST00000603130 150 ntBASIC0.41□□□□□ -2.34
PTP4A1Q93096 AP000942.4-201ENST00000604811 241 ntBASIC0.41□□□□□ -2.34
PTP4A1Q93096 AL162730.1-201ENST00000605734 292 ntBASIC0.41□□□□□ -2.34
PTP4A1Q93096 AC007485.1-201ENST00000616755 206 ntBASIC0.41□□□□□ -2.34
PTP4A1Q93096 MIR6734-201ENST00000621166 68 ntBASIC0.41□□□□□ -2.34
PTP4A1Q93096 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
PTP4A1Q93096 MIR18A-201ENST00000362310 71 ntBASIC0.4□□□□□ -2.35
PTP4A1Q93096 Y_RNA.813-201ENST00000364639 102 ntBASIC0.4□□□□□ -2.35
PTP4A1Q93096 Y_RNA.303-201ENST00000364998 94 ntBASIC0.4□□□□□ -2.35
PTP4A1Q93096 MIR518E-201ENST00000385252 88 ntBASIC0.4□□□□□ -2.35
PTP4A1Q93096 SNORD115-46-201ENST00000390982 71 ntBASIC0.4□□□□□ -2.35
PTP4A1Q93096 MIR938-201ENST00000401216 83 ntBASIC0.4□□□□□ -2.35
PTP4A1Q93096 RNU6-101P-201ENST00000410323 104 ntBASIC0.4□□□□□ -2.35
PTP4A1Q93096 AC022028.1-201ENST00000412054 408 ntBASIC0.4□□□□□ -2.35
PTP4A1Q93096 MTCO1P5-201ENST00000433573 344 ntBASIC0.4□□□□□ -2.35
PTP4A1Q93096 HSPE1P25-201ENST00000455484 251 ntBASIC0.4□□□□□ -2.35
PTP4A1Q93096 SNORA18.4-201ENST00000516440 124 ntBASIC0.4□□□□□ -2.35
PTP4A1Q93096 MIR5688-201ENST00000580619 83 ntBASIC0.4□□□□□ -2.35
PTP4A1Q93096 AL133255.1-201ENST00000606374 441 ntBASIC0.4□□□□□ -2.35
PTP4A1Q93096 AL021707.8-201ENST00000609428 183 ntBASIC0.4□□□□□ -2.35
PTP4A1Q93096 MIR6513-201ENST00000621188 64 ntBASIC0.4□□□□□ -2.35
PTP4A1Q93096 SNORA25.1-201ENST00000362326 128 ntBASIC0.39□□□□□ -2.35
PTP4A1Q93096 RNU1-133P-201ENST00000364867 167 ntBASIC0.39□□□□□ -2.35
PTP4A1Q93096 Y_RNA.293-201ENST00000364908 93 ntBASIC0.39□□□□□ -2.35
PTP4A1Q93096 RNU6-383P-201ENST00000410864 94 ntBASIC0.39□□□□□ -2.35
PTP4A1Q93096 snoU13.21-201ENST00000459368 105 ntBASIC0.39□□□□□ -2.35
PTP4A1Q93096 Y_RNA.666-201ENST00000516187 112 ntBASIC0.39□□□□□ -2.35
PTP4A1Q93096 RNU6-397P-201ENST00000516226 104 ntBASIC0.39□□□□□ -2.35
PTP4A1Q93096 RNU6-229P-201ENST00000516614 102 ntBASIC0.39□□□□□ -2.35
PTP4A1Q93096 Y_RNA.715-201ENST00000517082 110 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 164.9 ms