Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 MIR1265-201ENST00000408444 86 ntBASIC3.26□□□□□ -1.89
SNIP1Q8TAD8 AC245047.7-201ENST00000440265 293 ntBASIC3.26□□□□□ -1.89
SNIP1Q8TAD8 RNU7-73P-201ENST00000458743 63 ntBASIC3.26□□□□□ -1.89
SNIP1Q8TAD8 RNU7-170P-201ENST00000459303 61 ntBASIC3.26□□□□□ -1.89
SNIP1Q8TAD8 TRBV12-2-201ENST00000489763 344 ntBASIC3.26□□□□□ -1.89
SNIP1Q8TAD8 AC018868.1-201ENST00000491307 315 ntBASIC3.26□□□□□ -1.89
SNIP1Q8TAD8 SNORD67.1-201ENST00000516618 108 ntBASIC3.26□□□□□ -1.89
SNIP1Q8TAD8 RNU6-711P-201ENST00000517255 106 ntBASIC3.26□□□□□ -1.89
SNIP1Q8TAD8 MTND5P40-201ENST00000559945 246 ntBASIC3.26□□□□□ -1.89
SNIP1Q8TAD8 AC007336.1-201ENST00000576365 3828 ntBASIC3.26□□□□□ -1.89
SNIP1Q8TAD8 RPL12P50-201ENST00000603116 116 ntBASIC3.26□□□□□ -1.89
SNIP1Q8TAD8 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.26□□□□□ -1.89
SNIP1Q8TAD8 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
SNIP1Q8TAD8 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SNIP1Q8TAD8 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.25□□□□□ -1.89
SNIP1Q8TAD8 MIR422A-201ENST00000362286 90 ntBASIC3.25□□□□□ -1.89
SNIP1Q8TAD8 RNU6-160P-201ENST00000384591 107 ntBASIC3.25□□□□□ -1.89
SNIP1Q8TAD8 RNU6-1072P-201ENST00000384703 107 ntBASIC3.25□□□□□ -1.89
SNIP1Q8TAD8 RNU6-443P-201ENST00000384780 107 ntBASIC3.25□□□□□ -1.89
SNIP1Q8TAD8 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC3.25□□□□□ -1.89
SNIP1Q8TAD8 SNORD59.2-201ENST00000516873 68 ntBASIC3.25□□□□□ -1.89
SNIP1Q8TAD8 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC3.25□□□□□ -1.89
SNIP1Q8TAD8 FAM106DP-201ENST00000586416 501 ntBASIC3.25□□□□□ -1.89
SNIP1Q8TAD8 AC105081.1-201ENST00000617727 106 ntBASIC3.25□□□□□ -1.89
SNIP1Q8TAD8 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.25□□□□□ -1.89
SNIP1Q8TAD8 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SNIP1Q8TAD8 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SNIP1Q8TAD8 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SNIP1Q8TAD8 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SNIP1Q8TAD8 RNU6-833P-201ENST00000363486 107 ntBASIC3.24□□□□□ -1.89
SNIP1Q8TAD8 RNU6-1321P-201ENST00000390905 107 ntBASIC3.24□□□□□ -1.89
SNIP1Q8TAD8 SEM1P1-201ENST00000506694 209 ntBASIC3.24□□□□□ -1.89
SNIP1Q8TAD8 RNU6-871P-201ENST00000516122 100 ntBASIC3.24□□□□□ -1.89
SNIP1Q8TAD8 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC3.24□□□□□ -1.89
SNIP1Q8TAD8 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SNIP1Q8TAD8 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SNIP1Q8TAD8 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.24□□□□□ -1.89
SNIP1Q8TAD8 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
SNIP1Q8TAD8 MIRLET7A1-201ENST00000362295 80 ntBASIC3.23□□□□□ -1.89
SNIP1Q8TAD8 SNORA2B-201ENST00000384583 137 ntBASIC3.23□□□□□ -1.89
SNIP1Q8TAD8 U8.16-201ENST00000391279 133 ntBASIC3.23□□□□□ -1.89
SNIP1Q8TAD8 HMGN1P33-201ENST00000432945 451 ntBASIC3.23□□□□□ -1.89
SNIP1Q8TAD8 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.23□□□□□ -1.89
SNIP1Q8TAD8 AC234781.5-201ENST00000508429 271 ntBASIC3.23□□□□□ -1.89
SNIP1Q8TAD8 SNORA31.10-201ENST00000516482 106 ntBASIC3.23□□□□□ -1.89
SNIP1Q8TAD8 RNU6-1015P-201ENST00000517121 99 ntBASIC3.23□□□□□ -1.89
SNIP1Q8TAD8 AC243994.1-201ENST00000618627 109 ntBASIC3.23□□□□□ -1.89
SNIP1Q8TAD8 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.23□□□□□ -1.89
SNIP1Q8TAD8 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
SNIP1Q8TAD8 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.22□□□□□ -1.89
SNIP1Q8TAD8 AP000648.3-201ENST00000623539 4507 ntBASIC3.22□□□□□ -1.89
SNIP1Q8TAD8 SNORA5B-201ENST00000363786 132 ntBASIC3.22□□□□□ -1.89
SNIP1Q8TAD8 RNA5SP126-201ENST00000365092 109 ntBASIC3.22□□□□□ -1.89
SNIP1Q8TAD8 SNORD38.2-201ENST00000384470 69 ntBASIC3.22□□□□□ -1.89
SNIP1Q8TAD8 SNORA44-201ENST00000384584 132 ntBASIC3.22□□□□□ -1.89
SNIP1Q8TAD8 RNU6-1086P-201ENST00000410930 100 ntBASIC3.22□□□□□ -1.89
SNIP1Q8TAD8 ARF4P2-201ENST00000430209 526 ntBASIC3.22□□□□□ -1.89
SNIP1Q8TAD8 RPS29P31-201ENST00000446147 164 ntBASIC3.22□□□□□ -1.89
SNIP1Q8TAD8 RNU6-557P-201ENST00000516842 110 ntBASIC3.22□□□□□ -1.89
SNIP1Q8TAD8 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.22□□□□□ -1.89
SNIP1Q8TAD8 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.22□□□□□ -1.89
SNIP1Q8TAD8 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SNIP1Q8TAD8 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SNIP1Q8TAD8 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SNIP1Q8TAD8 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.22□□□□□ -1.89
SNIP1Q8TAD8 AC006989.1-201ENST00000427212 131 ntBASIC3.21□□□□□ -1.9
SNIP1Q8TAD8 SNORD4B-201ENST00000459083 72 ntBASIC3.21□□□□□ -1.9
SNIP1Q8TAD8 snoU13.11-201ENST00000459219 104 ntBASIC3.21□□□□□ -1.9
SNIP1Q8TAD8 RN7SL594P-201ENST00000470590 287 ntBASIC3.21□□□□□ -1.9
SNIP1Q8TAD8 AC023141.11-201ENST00000508864 202 ntBASIC3.21□□□□□ -1.9
SNIP1Q8TAD8 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.21□□□□□ -1.9
SNIP1Q8TAD8 RNU7-79P-201ENST00000516082 62 ntBASIC3.21□□□□□ -1.9
SNIP1Q8TAD8 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.21□□□□□ -1.9
SNIP1Q8TAD8 AL033523.1-201ENST00000605153 153 ntBASIC3.21□□□□□ -1.9
SNIP1Q8TAD8 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
SNIP1Q8TAD8 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SNIP1Q8TAD8 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.21□□□□□ -1.9
SNIP1Q8TAD8 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.21□□□□□ -1.9
SNIP1Q8TAD8 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
SNIP1Q8TAD8 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.2□□□□□ -1.9
SNIP1Q8TAD8 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
SNIP1Q8TAD8 RNA5SP493-201ENST00000364115 91 ntBASIC3.2□□□□□ -1.9
SNIP1Q8TAD8 RNU6-686P-201ENST00000364839 107 ntBASIC3.2□□□□□ -1.9
SNIP1Q8TAD8 SNORD28B-201ENST00000390993 75 ntBASIC3.2□□□□□ -1.9
SNIP1Q8TAD8 MIR1262-201ENST00000408276 93 ntBASIC3.2□□□□□ -1.9
SNIP1Q8TAD8 RNU6-380P-201ENST00000410207 107 ntBASIC3.2□□□□□ -1.9
SNIP1Q8TAD8 AC104984.5-201ENST00000586878 94 ntBASIC3.2□□□□□ -1.9
SNIP1Q8TAD8 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.2□□□□□ -1.9
SNIP1Q8TAD8 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
SNIP1Q8TAD8 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.19□□□□□ -1.9
SNIP1Q8TAD8 SNORA63.2-201ENST00000362603 126 ntBASIC3.19□□□□□ -1.9
SNIP1Q8TAD8 Y_RNA.98-201ENST00000363109 102 ntBASIC3.19□□□□□ -1.9
SNIP1Q8TAD8 RNU1-101P-201ENST00000391171 127 ntBASIC3.19□□□□□ -1.9
SNIP1Q8TAD8 RNU7-48P-201ENST00000458875 63 ntBASIC3.19□□□□□ -1.9
SNIP1Q8TAD8 RNU7-12P-201ENST00000516030 62 ntBASIC3.19□□□□□ -1.9
SNIP1Q8TAD8 RNA5SP168-201ENST00000516642 112 ntBASIC3.19□□□□□ -1.9
SNIP1Q8TAD8 RNU7-137P-201ENST00000516788 62 ntBASIC3.19□□□□□ -1.9
SNIP1Q8TAD8 MIR548AR-201ENST00000582191 57 ntBASIC3.19□□□□□ -1.9
SNIP1Q8TAD8 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SNIP1Q8TAD8 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 310.5 ms