Protein–RNA interactions for Protein: Q8NEM2

SHCBP1, SHC SH2 domain-binding protein 1, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1Q8NEM2 SNORA40.18-201ENST00000391200 128 ntBASIC2.27□□□□□ -2.05
SHCBP1Q8NEM2 RPS27P21-201ENST00000486977 252 ntBASIC2.27□□□□□ -2.05
SHCBP1Q8NEM2 AC005786.1-201ENST00000588553 154 ntBASIC2.27□□□□□ -2.05
SHCBP1Q8NEM2 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
SHCBP1Q8NEM2 Y_RNA.4-201ENST00000362333 112 ntBASIC2.26□□□□□ -2.05
SHCBP1Q8NEM2 RNU6-153P-201ENST00000364422 104 ntBASIC2.26□□□□□ -2.05
SHCBP1Q8NEM2 MIR29C-201ENST00000385231 88 ntBASIC2.26□□□□□ -2.05
SHCBP1Q8NEM2 RNY4P18-201ENST00000391107 89 ntBASIC2.26□□□□□ -2.05
SHCBP1Q8NEM2 RNA5SP270-201ENST00000411361 118 ntBASIC2.26□□□□□ -2.05
SHCBP1Q8NEM2 SNRPGP14-201ENST00000435400 219 ntBASIC2.26□□□□□ -2.05
SHCBP1Q8NEM2 MTATP6P21-201ENST00000440681 189 ntBASIC2.26□□□□□ -2.05
SHCBP1Q8NEM2 MIR514B-201ENST00000516774 80 ntBASIC2.26□□□□□ -2.05
SHCBP1Q8NEM2 RNU6-1149P-201ENST00000516810 97 ntBASIC2.26□□□□□ -2.05
SHCBP1Q8NEM2 AC108081.1-201ENST00000604358 221 ntBASIC2.26□□□□□ -2.05
SHCBP1Q8NEM2 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
SHCBP1Q8NEM2 MIR802-201ENST00000390235 94 ntBASIC2.25□□□□□ -2.05
SHCBP1Q8NEM2 MIR548O-201ENST00000408583 114 ntBASIC2.25□□□□□ -2.05
SHCBP1Q8NEM2 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.25□□□□□ -2.05
SHCBP1Q8NEM2 HMGN2P38-201ENST00000423806 265 ntBASIC2.25□□□□□ -2.05
SHCBP1Q8NEM2 AC104435.1-201ENST00000483483 166 ntBASIC2.25□□□□□ -2.05
SHCBP1Q8NEM2 AC090255.1-201ENST00000495779 349 ntBASIC2.25□□□□□ -2.05
SHCBP1Q8NEM2 SCARNA15-202ENST00000516881 127 ntBASIC2.25□□□□□ -2.05
SHCBP1Q8NEM2 IGKV1-22-201ENST00000524313 326 ntBASIC2.25□□□□□ -2.05
SHCBP1Q8NEM2 MIR5089-201ENST00000580047 84 ntBASIC2.25□□□□□ -2.05
SHCBP1Q8NEM2 AC006441.5-201ENST00000612680 209 ntBASIC2.25□□□□□ -2.05
SHCBP1Q8NEM2 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
SHCBP1Q8NEM2 RNU6-1084P-201ENST00000362498 107 ntBASIC2.24□□□□□ -2.05
SHCBP1Q8NEM2 SNORA63.4-201ENST00000362763 126 ntBASIC2.24□□□□□ -2.05
SHCBP1Q8NEM2 SNORD14E-201ENST00000364009 85 ntBASIC2.24□□□□□ -2.05
SHCBP1Q8NEM2 RNU6-268P-201ENST00000364174 107 ntBASIC2.24□□□□□ -2.05
SHCBP1Q8NEM2 Y_RNA.265-201ENST00000364677 108 ntBASIC2.24□□□□□ -2.05
SHCBP1Q8NEM2 snoU2-30.1-201ENST00000365012 70 ntBASIC2.24□□□□□ -2.05
SHCBP1Q8NEM2 RNU6-442P-201ENST00000383968 104 ntBASIC2.24□□□□□ -2.05
SHCBP1Q8NEM2 MIR597-201ENST00000384968 97 ntBASIC2.24□□□□□ -2.05
SHCBP1Q8NEM2 MIRLET7F2-201ENST00000385277 83 ntBASIC2.24□□□□□ -2.05
SHCBP1Q8NEM2 RNA5SP482-201ENST00000391269 118 ntBASIC2.24□□□□□ -2.05
SHCBP1Q8NEM2 SNORD23.1-201ENST00000408212 104 ntBASIC2.24□□□□□ -2.05
SHCBP1Q8NEM2 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.24□□□□□ -2.05
SHCBP1Q8NEM2 AL021397.1-201ENST00000451806 248 ntBASIC2.24□□□□□ -2.05
SHCBP1Q8NEM2 RN7SKP19-201ENST00000516016 252 ntBASIC2.24□□□□□ -2.05
SHCBP1Q8NEM2 RNU7-25P-201ENST00000516544 62 ntBASIC2.24□□□□□ -2.05
SHCBP1Q8NEM2 SNORD45.4-201ENST00000516629 73 ntBASIC2.24□□□□□ -2.05
SHCBP1Q8NEM2 RNU7-193P-201ENST00000516723 65 ntBASIC2.24□□□□□ -2.05
SHCBP1Q8NEM2 Y_RNA.709-201ENST00000516952 92 ntBASIC2.24□□□□□ -2.05
SHCBP1Q8NEM2 AC084364.2-201ENST00000546924 395 ntBASIC2.24□□□□□ -2.05
SHCBP1Q8NEM2 MIR8054-201ENST00000620877 86 ntBASIC2.24□□□□□ -2.05
SHCBP1Q8NEM2 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
SHCBP1Q8NEM2 AL445685.2-201ENST00000422551 342 ntBASIC2.23□□□□□ -2.05
SHCBP1Q8NEM2 AC108729.3-201ENST00000513484 108 ntBASIC2.23□□□□□ -2.05
SHCBP1Q8NEM2 RNU6-589P-201ENST00000516485 107 ntBASIC2.23□□□□□ -2.05
SHCBP1Q8NEM2 SNORA31.25-201ENST00000517242 134 ntBASIC2.23□□□□□ -2.05
SHCBP1Q8NEM2 MIR5197-201ENST00000583721 112 ntBASIC2.23□□□□□ -2.05
SHCBP1Q8NEM2 AC069114.2-201ENST00000604699 304 ntBASIC2.23□□□□□ -2.05
SHCBP1Q8NEM2 AL670379.3-201ENST00000605040 251 ntBASIC2.23□□□□□ -2.05
SHCBP1Q8NEM2 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.23□□□□□ -2.05
SHCBP1Q8NEM2 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
SHCBP1Q8NEM2 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
SHCBP1Q8NEM2 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
SHCBP1Q8NEM2 RNU6-1019P-201ENST00000364424 107 ntBASIC2.22□□□□□ -2.05
SHCBP1Q8NEM2 RNU6-440P-201ENST00000390882 105 ntBASIC2.22□□□□□ -2.05
SHCBP1Q8NEM2 MIR1283-2-201ENST00000408621 87 ntBASIC2.22□□□□□ -2.05
SHCBP1Q8NEM2 STAG3L5P-204ENST00000443759 179 ntBASIC2.22□□□□□ -2.05
SHCBP1Q8NEM2 PDCD5P2-201ENST00000507570 312 ntBASIC2.22□□□□□ -2.05
SHCBP1Q8NEM2 SNORA31.10-201ENST00000516482 106 ntBASIC2.22□□□□□ -2.05
SHCBP1Q8NEM2 RNU7-28P-201ENST00000516759 62 ntBASIC2.22□□□□□ -2.05
SHCBP1Q8NEM2 MIR4498-201ENST00000577599 66 ntBASIC2.22□□□□□ -2.05
SHCBP1Q8NEM2 MIR5094-201ENST00000578766 85 ntBASIC2.22□□□□□ -2.05
SHCBP1Q8NEM2 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.22□□□□□ -2.05
SHCBP1Q8NEM2 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
SHCBP1Q8NEM2 AL359851.1-201ENST00000569460 4997 ntBASIC2.21□□□□□ -2.06
SHCBP1Q8NEM2 Y_RNA.547-201ENST00000384654 119 ntBASIC2.21□□□□□ -2.06
SHCBP1Q8NEM2 RNU11-3P-201ENST00000391111 133 ntBASIC2.21□□□□□ -2.06
SHCBP1Q8NEM2 HMGN2P39-201ENST00000398005 273 ntBASIC2.21□□□□□ -2.06
SHCBP1Q8NEM2 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.21□□□□□ -2.06
SHCBP1Q8NEM2 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.21□□□□□ -2.06
SHCBP1Q8NEM2 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.21□□□□□ -2.06
SHCBP1Q8NEM2 AC134878.1-201ENST00000619901 243 ntBASIC2.21□□□□□ -2.06
SHCBP1Q8NEM2 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
SHCBP1Q8NEM2 MIRLET7C-201ENST00000362160 84 ntBASIC2.2□□□□□ -2.06
SHCBP1Q8NEM2 Y_RNA.336-201ENST00000365307 109 ntBASIC2.2□□□□□ -2.06
SHCBP1Q8NEM2 RNU4-52P-201ENST00000384209 138 ntBASIC2.2□□□□□ -2.06
SHCBP1Q8NEM2 AC108667.1-201ENST00000428618 249 ntBASIC2.2□□□□□ -2.06
SHCBP1Q8NEM2 HSPE1P9-201ENST00000440046 311 ntBASIC2.2□□□□□ -2.06
SHCBP1Q8NEM2 RPL23AP63-201ENST00000498752 471 ntBASIC2.2□□□□□ -2.06
SHCBP1Q8NEM2 RNU6-1053P-201ENST00000515930 101 ntBASIC2.2□□□□□ -2.06
SHCBP1Q8NEM2 RNU6-1116P-201ENST00000517269 99 ntBASIC2.2□□□□□ -2.06
SHCBP1Q8NEM2 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.2□□□□□ -2.06
SHCBP1Q8NEM2 MIR4529-201ENST00000578110 78 ntBASIC2.2□□□□□ -2.06
SHCBP1Q8NEM2 MIR3683-201ENST00000580847 82 ntBASIC2.2□□□□□ -2.06
SHCBP1Q8NEM2 AC025166.1-201ENST00000612411 163 ntBASIC2.2□□□□□ -2.06
SHCBP1Q8NEM2 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SHCBP1Q8NEM2 Y_RNA.37-201ENST00000362606 108 ntBASIC2.19□□□□□ -2.06
SHCBP1Q8NEM2 SNORD115-28-201ENST00000363931 81 ntBASIC2.19□□□□□ -2.06
SHCBP1Q8NEM2 Y_RNA.410-201ENST00000383992 113 ntBASIC2.19□□□□□ -2.06
SHCBP1Q8NEM2 MIR548A3-201ENST00000385297 97 ntBASIC2.19□□□□□ -2.06
SHCBP1Q8NEM2 RNU6-938P-201ENST00000411285 103 ntBASIC2.19□□□□□ -2.06
SHCBP1Q8NEM2 AC114811.1-201ENST00000507207 168 ntBASIC2.19□□□□□ -2.06
SHCBP1Q8NEM2 AC078899.2-201ENST00000595282 212 ntBASIC2.19□□□□□ -2.06
SHCBP1Q8NEM2 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SHCBP1Q8NEM2 MTND5P18-201ENST00000445624 1801 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms