Protein–RNA interactions for Protein: Q8NCR9

CLRN3, Clarin-3, humanhuman

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3Q8NCR9 RNU7-197P-201ENST00000458836 62 ntBASIC1.83□□□□□ -2.12
CLRN3Q8NCR9 RNU7-96P-201ENST00000459535 64 ntBASIC1.83□□□□□ -2.12
CLRN3Q8NCR9 RNU7-80P-201ENST00000459562 61 ntBASIC1.83□□□□□ -2.12
CLRN3Q8NCR9 RPS26P48-201ENST00000491713 339 ntBASIC1.83□□□□□ -2.12
CLRN3Q8NCR9 RNA5SP445-201ENST00000515889 115 ntBASIC1.83□□□□□ -2.12
CLRN3Q8NCR9 RNU6-346P-201ENST00000516288 111 ntBASIC1.83□□□□□ -2.12
CLRN3Q8NCR9 AC019176.1-201ENST00000518519 225 ntBASIC1.83□□□□□ -2.12
CLRN3Q8NCR9 MIR4764-201ENST00000580680 88 ntBASIC1.83□□□□□ -2.12
CLRN3Q8NCR9 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.82□□□□□ -2.12
CLRN3Q8NCR9 Y_RNA.120-201ENST00000363304 110 ntBASIC1.82□□□□□ -2.12
CLRN3Q8NCR9 MIR613-201ENST00000385248 95 ntBASIC1.82□□□□□ -2.12
CLRN3Q8NCR9 SUMO2P12-201ENST00000405924 140 ntBASIC1.82□□□□□ -2.12
CLRN3Q8NCR9 RPL39P39-201ENST00000455840 151 ntBASIC1.82□□□□□ -2.12
CLRN3Q8NCR9 RPS29P24-201ENST00000486345 171 ntBASIC1.82□□□□□ -2.12
CLRN3Q8NCR9 AC234781.5-201ENST00000508429 271 ntBASIC1.82□□□□□ -2.12
CLRN3Q8NCR9 RNU6-1149P-201ENST00000516810 97 ntBASIC1.82□□□□□ -2.12
CLRN3Q8NCR9 U4.3-201ENST00000621047 82 ntBASIC1.82□□□□□ -2.12
CLRN3Q8NCR9 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
CLRN3Q8NCR9 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CLRN3Q8NCR9 AL136360.1-201ENST00000503377 1900 ntBASIC1.81□□□□□ -2.12
CLRN3Q8NCR9 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CLRN3Q8NCR9 RNU1-112P-201ENST00000364401 164 ntBASIC1.81□□□□□ -2.12
CLRN3Q8NCR9 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.81□□□□□ -2.12
CLRN3Q8NCR9 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.81□□□□□ -2.12
CLRN3Q8NCR9 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.81□□□□□ -2.12
CLRN3Q8NCR9 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.81□□□□□ -2.12
CLRN3Q8NCR9 MTND5P32-201ENST00000560711 1802 ntBASIC1.8□□□□□ -2.12
CLRN3Q8NCR9 Y_RNA.351-201ENST00000365436 96 ntBASIC1.8□□□□□ -2.12
CLRN3Q8NCR9 Y_RNA.568-201ENST00000384742 113 ntBASIC1.8□□□□□ -2.12
CLRN3Q8NCR9 SNORD28B-201ENST00000390993 75 ntBASIC1.8□□□□□ -2.12
CLRN3Q8NCR9 AL392103.1-201ENST00000447000 198 ntBASIC1.8□□□□□ -2.12
CLRN3Q8NCR9 RPS29P29-201ENST00000456396 171 ntBASIC1.8□□□□□ -2.12
CLRN3Q8NCR9 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.8□□□□□ -2.12
CLRN3Q8NCR9 RNU2-13P-201ENST00000515909 113 ntBASIC1.8□□□□□ -2.12
CLRN3Q8NCR9 RNU6-426P-201ENST00000516464 97 ntBASIC1.8□□□□□ -2.12
CLRN3Q8NCR9 RNU7-53P-201ENST00000516705 60 ntBASIC1.8□□□□□ -2.12
CLRN3Q8NCR9 SCARNA15-202ENST00000516881 127 ntBASIC1.8□□□□□ -2.12
CLRN3Q8NCR9 AC008133.2-201ENST00000624540 351 ntBASIC1.8□□□□□ -2.12
CLRN3Q8NCR9 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.8□□□□□ -2.12
CLRN3Q8NCR9 AL137790.1-201ENST00000634283 177 ntBASIC1.8□□□□□ -2.12
CLRN3Q8NCR9 MIR376A2-201ENST00000636782 80 ntBASIC1.8□□□□□ -2.12
CLRN3Q8NCR9 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
CLRN3Q8NCR9 RNA5SP48-201ENST00000363969 126 ntBASIC1.79□□□□□ -2.12
CLRN3Q8NCR9 Y_RNA.420-201ENST00000384043 110 ntBASIC1.79□□□□□ -2.12
CLRN3Q8NCR9 SNORA51.10-201ENST00000384418 136 ntBASIC1.79□□□□□ -2.12
CLRN3Q8NCR9 MIR128-1-201ENST00000384921 82 ntBASIC1.79□□□□□ -2.12
CLRN3Q8NCR9 SNORA48.2-201ENST00000390926 124 ntBASIC1.79□□□□□ -2.12
CLRN3Q8NCR9 UBL5P3-201ENST00000475112 231 ntBASIC1.79□□□□□ -2.12
CLRN3Q8NCR9 RNU6-998P-201ENST00000515894 101 ntBASIC1.79□□□□□ -2.12
CLRN3Q8NCR9 AP001328.1-201ENST00000528550 176 ntBASIC1.79□□□□□ -2.12
CLRN3Q8NCR9 MIR3122-201ENST00000577243 73 ntBASIC1.79□□□□□ -2.12
CLRN3Q8NCR9 AP001485.1-201ENST00000604799 199 ntBASIC1.79□□□□□ -2.12
CLRN3Q8NCR9 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.79□□□□□ -2.12
CLRN3Q8NCR9 MIR7106-201ENST00000612419 65 ntBASIC1.79□□□□□ -2.12
CLRN3Q8NCR9 AC243994.1-201ENST00000618627 109 ntBASIC1.79□□□□□ -2.12
CLRN3Q8NCR9 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
CLRN3Q8NCR9 AP001340.1-201ENST00000624405 217 ntBASIC1.79□□□□□ -2.12
CLRN3Q8NCR9 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.78□□□□□ -2.12
CLRN3Q8NCR9 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
CLRN3Q8NCR9 AC010332.2-201ENST00000613083 1904 ntBASIC1.78□□□□□ -2.12
CLRN3Q8NCR9 RNA5SP160-201ENST00000364866 120 ntBASIC1.78□□□□□ -2.12
CLRN3Q8NCR9 SNORA24-201ENST00000384096 131 ntBASIC1.78□□□□□ -2.12
CLRN3Q8NCR9 RNU7-67P-201ENST00000459003 62 ntBASIC1.78□□□□□ -2.12
CLRN3Q8NCR9 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.78□□□□□ -2.12
CLRN3Q8NCR9 MIR4791-201ENST00000607666 84 ntBASIC1.78□□□□□ -2.12
CLRN3Q8NCR9 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.78□□□□□ -2.12
CLRN3Q8NCR9 MIR302B-201ENST00000362188 73 ntBASIC1.77□□□□□ -2.13
CLRN3Q8NCR9 RNU6-704P-201ENST00000364162 103 ntBASIC1.77□□□□□ -2.13
CLRN3Q8NCR9 RNU1-133P-201ENST00000364867 167 ntBASIC1.77□□□□□ -2.13
CLRN3Q8NCR9 RNU6-187P-201ENST00000384139 106 ntBASIC1.77□□□□□ -2.13
CLRN3Q8NCR9 SNORA40-201ENST00000388090 126 ntBASIC1.77□□□□□ -2.13
CLRN3Q8NCR9 RNU6-460P-201ENST00000391158 108 ntBASIC1.77□□□□□ -2.13
CLRN3Q8NCR9 AL603914.1-201ENST00000401964 204 ntBASIC1.77□□□□□ -2.13
CLRN3Q8NCR9 AL035398.1-201ENST00000430869 322 ntBASIC1.77□□□□□ -2.13
CLRN3Q8NCR9 RNU6-902P-201ENST00000517212 91 ntBASIC1.77□□□□□ -2.13
CLRN3Q8NCR9 SNRPGP19-201ENST00000603826 189 ntBASIC1.77□□□□□ -2.13
CLRN3Q8NCR9 AL121890.5-201ENST00000620848 304 ntBASIC1.77□□□□□ -2.13
CLRN3Q8NCR9 RNU6-859P-201ENST00000362728 107 ntBASIC1.76□□□□□ -2.13
CLRN3Q8NCR9 U8.1-201ENST00000362843 134 ntBASIC1.76□□□□□ -2.13
CLRN3Q8NCR9 RNU6-915P-201ENST00000364943 103 ntBASIC1.76□□□□□ -2.13
CLRN3Q8NCR9 Y_RNA.494-201ENST00000384432 111 ntBASIC1.76□□□□□ -2.13
CLRN3Q8NCR9 RNA5SP236-201ENST00000516169 116 ntBASIC1.76□□□□□ -2.13
CLRN3Q8NCR9 AL512310.8-201ENST00000550183 120 ntBASIC1.76□□□□□ -2.13
CLRN3Q8NCR9 MIR3664-201ENST00000579074 99 ntBASIC1.76□□□□□ -2.13
CLRN3Q8NCR9 MIR5002-201ENST00000584713 97 ntBASIC1.76□□□□□ -2.13
CLRN3Q8NCR9 U7.2-201ENST00000607576 63 ntBASIC1.76□□□□□ -2.13
CLRN3Q8NCR9 TUG1_4.1-201ENST00000619464 181 ntBASIC1.76□□□□□ -2.13
CLRN3Q8NCR9 MIR6766-201ENST00000622641 72 ntBASIC1.76□□□□□ -2.13
CLRN3Q8NCR9 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.76□□□□□ -2.13
CLRN3Q8NCR9 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
CLRN3Q8NCR9 AP000648.3-201ENST00000623539 4507 ntBASIC1.76□□□□□ -2.13
CLRN3Q8NCR9 RNY1P11-201ENST00000363759 113 ntBASIC1.75□□□□□ -2.13
CLRN3Q8NCR9 RPS27P16-201ENST00000425758 201 ntBASIC1.75□□□□□ -2.13
CLRN3Q8NCR9 TMSB4XP3-201ENST00000445144 114 ntBASIC1.75□□□□□ -2.13
CLRN3Q8NCR9 Y_RNA.690-201ENST00000516603 95 ntBASIC1.75□□□□□ -2.13
CLRN3Q8NCR9 Y_RNA.692-201ENST00000516627 105 ntBASIC1.75□□□□□ -2.13
CLRN3Q8NCR9 AC024614.2-201ENST00000577584 372 ntBASIC1.75□□□□□ -2.13
CLRN3Q8NCR9 Y_RNA.757-201ENST00000578934 114 ntBASIC1.75□□□□□ -2.13
CLRN3Q8NCR9 AC091932.4-201ENST00000623386 200 ntBASIC1.75□□□□□ -2.13
CLRN3Q8NCR9 AC091895.1-201ENST00000624494 256 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms