Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 RNU6-1271P-201ENST00000517049 105 ntBASIC1.14□□□□□ -2.23
RTL3Q8N8U3 AC006006.1-201ENST00000603082 144 ntBASIC1.14□□□□□ -2.23
RTL3Q8N8U3 AL391903.3-201ENST00000612158 163 ntBASIC1.14□□□□□ -2.23
RTL3Q8N8U3 AC027335.2-201ENST00000624030 375 ntBASIC1.14□□□□□ -2.23
RTL3Q8N8U3 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
RTL3Q8N8U3 Y_RNA.24-201ENST00000362508 103 ntBASIC1.13□□□□□ -2.23
RTL3Q8N8U3 Y_RNA.65-201ENST00000362846 100 ntBASIC1.13□□□□□ -2.23
RTL3Q8N8U3 RNU4-17P-201ENST00000365598 141 ntBASIC1.13□□□□□ -2.23
RTL3Q8N8U3 RNY3P5-201ENST00000384127 102 ntBASIC1.13□□□□□ -2.23
RTL3Q8N8U3 MIR616-201ENST00000385293 97 ntBASIC1.13□□□□□ -2.23
RTL3Q8N8U3 SNORD72-201ENST00000390994 80 ntBASIC1.13□□□□□ -2.23
RTL3Q8N8U3 MLLT10P1-201ENST00000418346 262 ntBASIC1.13□□□□□ -2.23
RTL3Q8N8U3 AC093850.1-201ENST00000454121 251 ntBASIC1.13□□□□□ -2.23
RTL3Q8N8U3 OR2A41P-201ENST00000473586 105 ntBASIC1.13□□□□□ -2.23
RTL3Q8N8U3 SCARNA8-201ENST00000515924 131 ntBASIC1.13□□□□□ -2.23
RTL3Q8N8U3 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
RTL3Q8N8U3 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.13□□□□□ -2.23
RTL3Q8N8U3 AC006441.5-201ENST00000612680 209 ntBASIC1.13□□□□□ -2.23
RTL3Q8N8U3 AC141273.2-201ENST00000618989 130 ntBASIC1.13□□□□□ -2.23
RTL3Q8N8U3 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
RTL3Q8N8U3 Y_RNA.226-201ENST00000364337 114 ntBASIC1.12□□□□□ -2.23
RTL3Q8N8U3 Y_RNA.242-201ENST00000364473 110 ntBASIC1.12□□□□□ -2.23
RTL3Q8N8U3 SNORA2.2-201ENST00000365473 135 ntBASIC1.12□□□□□ -2.23
RTL3Q8N8U3 MIR1285-1-201ENST00000408593 84 ntBASIC1.12□□□□□ -2.23
RTL3Q8N8U3 MIR1298-201ENST00000408783 112 ntBASIC1.12□□□□□ -2.23
RTL3Q8N8U3 SNORA31.2-201ENST00000516019 134 ntBASIC1.12□□□□□ -2.23
RTL3Q8N8U3 RNU6-1007P-201ENST00000516586 107 ntBASIC1.12□□□□□ -2.23
RTL3Q8N8U3 AC090049.2-201ENST00000550377 109 ntBASIC1.12□□□□□ -2.23
RTL3Q8N8U3 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.12□□□□□ -2.23
RTL3Q8N8U3 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.12□□□□□ -2.23
RTL3Q8N8U3 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.11□□□□□ -2.23
RTL3Q8N8U3 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.11□□□□□ -2.23
RTL3Q8N8U3 RNU6-1084P-201ENST00000362498 107 ntBASIC1.11□□□□□ -2.23
RTL3Q8N8U3 RNU1-124P-201ENST00000363861 145 ntBASIC1.11□□□□□ -2.23
RTL3Q8N8U3 RNU6-442P-201ENST00000383968 104 ntBASIC1.11□□□□□ -2.23
RTL3Q8N8U3 RNU6-484P-201ENST00000384016 107 ntBASIC1.11□□□□□ -2.23
RTL3Q8N8U3 Y_RNA.435-201ENST00000384095 112 ntBASIC1.11□□□□□ -2.23
RTL3Q8N8U3 Y_RNA.476-201ENST00000384347 108 ntBASIC1.11□□□□□ -2.23
RTL3Q8N8U3 MIR452-201ENST00000385020 85 ntBASIC1.11□□□□□ -2.23
RTL3Q8N8U3 SNORD41-201ENST00000386967 70 ntBASIC1.11□□□□□ -2.23
RTL3Q8N8U3 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.11□□□□□ -2.23
RTL3Q8N8U3 RNU2-55P-201ENST00000411146 174 ntBASIC1.11□□□□□ -2.23
RTL3Q8N8U3 RPL39P39-201ENST00000455840 151 ntBASIC1.11□□□□□ -2.23
RTL3Q8N8U3 RN7SKP164-201ENST00000516138 266 ntBASIC1.11□□□□□ -2.23
RTL3Q8N8U3 RNU6-947P-201ENST00000516264 106 ntBASIC1.11□□□□□ -2.23
RTL3Q8N8U3 RNU6-830P-201ENST00000516353 107 ntBASIC1.11□□□□□ -2.23
RTL3Q8N8U3 RNU7-149P-201ENST00000516739 59 ntBASIC1.11□□□□□ -2.23
RTL3Q8N8U3 AC090142.3-201ENST00000519012 385 ntBASIC1.11□□□□□ -2.23
RTL3Q8N8U3 AL049861.1-201ENST00000603130 150 ntBASIC1.11□□□□□ -2.23
RTL3Q8N8U3 AC097639.2-201ENST00000603159 172 ntBASIC1.11□□□□□ -2.23
RTL3Q8N8U3 AL357312.1-201ENST00000603879 298 ntBASIC1.11□□□□□ -2.23
RTL3Q8N8U3 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
RTL3Q8N8U3 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
RTL3Q8N8U3 MIR411-201ENST00000362239 96 ntBASIC1.1□□□□□ -2.23
RTL3Q8N8U3 SNORD14E-201ENST00000364009 85 ntBASIC1.1□□□□□ -2.23
RTL3Q8N8U3 Y_RNA.200-201ENST00000364018 102 ntBASIC1.1□□□□□ -2.23
RTL3Q8N8U3 RNU6-268P-201ENST00000364174 107 ntBASIC1.1□□□□□ -2.23
RTL3Q8N8U3 RNU6-910P-201ENST00000390844 107 ntBASIC1.1□□□□□ -2.23
RTL3Q8N8U3 RNU6-1228P-201ENST00000391014 107 ntBASIC1.1□□□□□ -2.23
RTL3Q8N8U3 MIR1287-201ENST00000408492 90 ntBASIC1.1□□□□□ -2.23
RTL3Q8N8U3 AC023449.1-201ENST00000454464 154 ntBASIC1.1□□□□□ -2.23
RTL3Q8N8U3 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.1□□□□□ -2.23
RTL3Q8N8U3 RNU6-453P-201ENST00000516819 85 ntBASIC1.1□□□□□ -2.23
RTL3Q8N8U3 AC130289.1-201ENST00000577321 73 ntBASIC1.1□□□□□ -2.23
RTL3Q8N8U3 MIR4662B-201ENST00000579498 81 ntBASIC1.1□□□□□ -2.23
RTL3Q8N8U3 MIR4308-201ENST00000580634 81 ntBASIC1.1□□□□□ -2.23
RTL3Q8N8U3 MIR4295-201ENST00000585286 85 ntBASIC1.1□□□□□ -2.23
RTL3Q8N8U3 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.1□□□□□ -2.23
RTL3Q8N8U3 AC091895.1-201ENST00000624494 256 ntBASIC1.1□□□□□ -2.23
RTL3Q8N8U3 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
RTL3Q8N8U3 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
RTL3Q8N8U3 Y_RNA.121-201ENST00000363309 113 ntBASIC1.09□□□□□ -2.23
RTL3Q8N8U3 RNU6-103P-201ENST00000363686 107 ntBASIC1.09□□□□□ -2.23
RTL3Q8N8U3 Y_RNA.199-201ENST00000364014 102 ntBASIC1.09□□□□□ -2.23
RTL3Q8N8U3 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.09□□□□□ -2.23
RTL3Q8N8U3 AC087343.1-201ENST00000477341 475 ntBASIC1.09□□□□□ -2.23
RTL3Q8N8U3 RNY3P16-201ENST00000516338 101 ntBASIC1.09□□□□□ -2.23
RTL3Q8N8U3 RNU6-126P-201ENST00000516685 103 ntBASIC1.09□□□□□ -2.23
RTL3Q8N8U3 HSPE1P19-201ENST00000603327 295 ntBASIC1.09□□□□□ -2.23
RTL3Q8N8U3 AC012676.2-201ENST00000619258 186 ntBASIC1.09□□□□□ -2.23
RTL3Q8N8U3 AC078938.1-201ENST00000620993 318 ntBASIC1.09□□□□□ -2.23
RTL3Q8N8U3 Y_RNA.83-201ENST00000363005 113 ntBASIC1.08□□□□□ -2.24
RTL3Q8N8U3 Y_RNA.308-201ENST00000365043 101 ntBASIC1.08□□□□□ -2.24
RTL3Q8N8U3 Y_RNA.552-201ENST00000384665 112 ntBASIC1.08□□□□□ -2.24
RTL3Q8N8U3 MT-TT-201ENST00000387460 66 ntBASIC1.08□□□□□ -2.24
RTL3Q8N8U3 Y_RNA.587-201ENST00000391210 103 ntBASIC1.08□□□□□ -2.24
RTL3Q8N8U3 RNU6-918P-201ENST00000391219 106 ntBASIC1.08□□□□□ -2.24
RTL3Q8N8U3 AL606845.1-201ENST00000404881 255 ntBASIC1.08□□□□□ -2.24
RTL3Q8N8U3 RNU4-43P-201ENST00000410628 137 ntBASIC1.08□□□□□ -2.24
RTL3Q8N8U3 SNRPGP8-201ENST00000454064 226 ntBASIC1.08□□□□□ -2.24
RTL3Q8N8U3 AC048334.1-201ENST00000477975 159 ntBASIC1.08□□□□□ -2.24
RTL3Q8N8U3 RNU6-388P-201ENST00000517012 105 ntBASIC1.08□□□□□ -2.24
RTL3Q8N8U3 RNU6-389P-201ENST00000517048 105 ntBASIC1.08□□□□□ -2.24
RTL3Q8N8U3 Z83818.1-201ENST00000603584 150 ntBASIC1.08□□□□□ -2.24
RTL3Q8N8U3 SNORD114-21-201ENST00000606412 72 ntBASIC1.08□□□□□ -2.24
RTL3Q8N8U3 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
RTL3Q8N8U3 Y_RNA.7-201ENST00000362352 102 ntBASIC1.07□□□□□ -2.24
RTL3Q8N8U3 Y_RNA.66-201ENST00000362862 102 ntBASIC1.07□□□□□ -2.24
RTL3Q8N8U3 Y_RNA.274-201ENST00000364714 101 ntBASIC1.07□□□□□ -2.24
RTL3Q8N8U3 SNORA25.9-201ENST00000365087 128 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 175.6 ms