Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AL445685.2-201ENST00000422551 342 ntBASIC2.07□□□□□ -2.08
SLC44A3Q8N4M1 AC104435.1-201ENST00000483483 166 ntBASIC2.07□□□□□ -2.08
SLC44A3Q8N4M1 RPL23AP63-201ENST00000498752 471 ntBASIC2.07□□□□□ -2.08
SLC44A3Q8N4M1 RNU6-693P-201ENST00000516134 107 ntBASIC2.07□□□□□ -2.08
SLC44A3Q8N4M1 RNU6-589P-201ENST00000516485 107 ntBASIC2.07□□□□□ -2.08
SLC44A3Q8N4M1 MIR5197-201ENST00000583721 112 ntBASIC2.07□□□□□ -2.08
SLC44A3Q8N4M1 AC108081.1-201ENST00000604358 221 ntBASIC2.07□□□□□ -2.08
SLC44A3Q8N4M1 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.07□□□□□ -2.08
SLC44A3Q8N4M1 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
SLC44A3Q8N4M1 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SLC44A3Q8N4M1 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SLC44A3Q8N4M1 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
SLC44A3Q8N4M1 SNORD115-3-201ENST00000363100 82 ntBASIC2.06□□□□□ -2.08
SLC44A3Q8N4M1 SNORD68-201ENST00000363214 84 ntBASIC2.06□□□□□ -2.08
SLC44A3Q8N4M1 MIR548O-201ENST00000408583 114 ntBASIC2.06□□□□□ -2.08
SLC44A3Q8N4M1 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.06□□□□□ -2.08
SLC44A3Q8N4M1 AC245517.4-201ENST00000448601 281 ntBASIC2.06□□□□□ -2.08
SLC44A3Q8N4M1 SNORA31.10-201ENST00000516482 106 ntBASIC2.06□□□□□ -2.08
SLC44A3Q8N4M1 RNU6-1149P-201ENST00000516810 97 ntBASIC2.06□□□□□ -2.08
SLC44A3Q8N4M1 Y_RNA.714-201ENST00000517065 90 ntBASIC2.06□□□□□ -2.08
SLC44A3Q8N4M1 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.06□□□□□ -2.08
SLC44A3Q8N4M1 SNORD14A-201ENST00000606526 91 ntBASIC2.06□□□□□ -2.08
SLC44A3Q8N4M1 AP000553.5-201ENST00000641933 54 ntBASIC2.06□□□□□ -2.08
SLC44A3Q8N4M1 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SLC44A3Q8N4M1 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SLC44A3Q8N4M1 MIRLET7C-201ENST00000362160 84 ntBASIC2.05□□□□□ -2.08
SLC44A3Q8N4M1 RNU6-268P-201ENST00000364174 107 ntBASIC2.05□□□□□ -2.08
SLC44A3Q8N4M1 Y_RNA.355-201ENST00000365462 98 ntBASIC2.05□□□□□ -2.08
SLC44A3Q8N4M1 SNORD18B-201ENST00000365659 72 ntBASIC2.05□□□□□ -2.08
SLC44A3Q8N4M1 RNA5SP482-201ENST00000391269 118 ntBASIC2.05□□□□□ -2.08
SLC44A3Q8N4M1 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.05□□□□□ -2.08
SLC44A3Q8N4M1 RNA5SP445-201ENST00000515889 115 ntBASIC2.05□□□□□ -2.08
SLC44A3Q8N4M1 RNU7-25P-201ENST00000516544 62 ntBASIC2.05□□□□□ -2.08
SLC44A3Q8N4M1 Y_RNA.709-201ENST00000516952 92 ntBASIC2.05□□□□□ -2.08
SLC44A3Q8N4M1 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.05□□□□□ -2.08
SLC44A3Q8N4M1 AC084364.2-201ENST00000546924 395 ntBASIC2.05□□□□□ -2.08
SLC44A3Q8N4M1 snoU13.31-201ENST00000607291 104 ntBASIC2.05□□□□□ -2.08
SLC44A3Q8N4M1 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.05□□□□□ -2.08
SLC44A3Q8N4M1 MIR8054-201ENST00000620877 86 ntBASIC2.05□□□□□ -2.08
SLC44A3Q8N4M1 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SLC44A3Q8N4M1 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
SLC44A3Q8N4M1 RNU6-1019P-201ENST00000364424 107 ntBASIC2.04□□□□□ -2.08
SLC44A3Q8N4M1 RNA5SP37-201ENST00000365420 130 ntBASIC2.04□□□□□ -2.08
SLC44A3Q8N4M1 RNU6-442P-201ENST00000383968 104 ntBASIC2.04□□□□□ -2.08
SLC44A3Q8N4M1 Y_RNA.466-201ENST00000384294 113 ntBASIC2.04□□□□□ -2.08
SLC44A3Q8N4M1 MIR597-201ENST00000384968 97 ntBASIC2.04□□□□□ -2.08
SLC44A3Q8N4M1 HMGN2P38-201ENST00000423806 265 ntBASIC2.04□□□□□ -2.08
SLC44A3Q8N4M1 MTATP6P21-201ENST00000440681 189 ntBASIC2.04□□□□□ -2.08
SLC44A3Q8N4M1 AL021397.1-201ENST00000451806 248 ntBASIC2.04□□□□□ -2.08
SLC44A3Q8N4M1 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.04□□□□□ -2.08
SLC44A3Q8N4M1 RN7SKP19-201ENST00000516016 252 ntBASIC2.04□□□□□ -2.08
SLC44A3Q8N4M1 RNU7-28P-201ENST00000516759 62 ntBASIC2.04□□□□□ -2.08
SLC44A3Q8N4M1 AC133485.4-201ENST00000561835 220 ntBASIC2.04□□□□□ -2.08
SLC44A3Q8N4M1 AC138907.4-201ENST00000570107 226 ntBASIC2.04□□□□□ -2.08
SLC44A3Q8N4M1 AC069114.2-201ENST00000604699 304 ntBASIC2.04□□□□□ -2.08
SLC44A3Q8N4M1 MIR6840-201ENST00000611937 71 ntBASIC2.04□□□□□ -2.08
SLC44A3Q8N4M1 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.04□□□□□ -2.08
SLC44A3Q8N4M1 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
SLC44A3Q8N4M1 AL596028.1-201ENST00000326971 197 ntBASIC2.03□□□□□ -2.08
SLC44A3Q8N4M1 MIR378A-201ENST00000362177 66 ntBASIC2.03□□□□□ -2.08
SLC44A3Q8N4M1 SNORA63D-201ENST00000364359 132 ntBASIC2.03□□□□□ -2.08
SLC44A3Q8N4M1 RNU6-755P-201ENST00000364400 103 ntBASIC2.03□□□□□ -2.08
SLC44A3Q8N4M1 snoU2-30.1-201ENST00000365012 70 ntBASIC2.03□□□□□ -2.08
SLC44A3Q8N4M1 RNU6-938P-201ENST00000411285 103 ntBASIC2.03□□□□□ -2.08
SLC44A3Q8N4M1 HSPE1P9-201ENST00000440046 311 ntBASIC2.03□□□□□ -2.08
SLC44A3Q8N4M1 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.03□□□□□ -2.08
SLC44A3Q8N4M1 AC090255.1-201ENST00000495779 349 ntBASIC2.03□□□□□ -2.08
SLC44A3Q8N4M1 RNU6-1061P-201ENST00000516530 99 ntBASIC2.03□□□□□ -2.08
SLC44A3Q8N4M1 SNORD45.4-201ENST00000516629 73 ntBASIC2.03□□□□□ -2.08
SLC44A3Q8N4M1 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.03□□□□□ -2.09
SLC44A3Q8N4M1 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SLC44A3Q8N4M1 WWP1P1-201ENST00000466609 2769 ntBASIC2.02□□□□□ -2.09
SLC44A3Q8N4M1 SNORA63.4-201ENST00000362763 126 ntBASIC2.02□□□□□ -2.09
SLC44A3Q8N4M1 RNU6-457P-201ENST00000363999 107 ntBASIC2.02□□□□□ -2.09
SLC44A3Q8N4M1 SNORD14E-201ENST00000364009 85 ntBASIC2.02□□□□□ -2.09
SLC44A3Q8N4M1 Y_RNA.336-201ENST00000365307 109 ntBASIC2.02□□□□□ -2.09
SLC44A3Q8N4M1 Y_RNA.547-201ENST00000384654 119 ntBASIC2.02□□□□□ -2.09
SLC44A3Q8N4M1 RNU6-440P-201ENST00000390882 105 ntBASIC2.02□□□□□ -2.09
SLC44A3Q8N4M1 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.02□□□□□ -2.09
SLC44A3Q8N4M1 AC063976.4-201ENST00000421971 163 ntBASIC2.02□□□□□ -2.09
SLC44A3Q8N4M1 MTND5P34-201ENST00000568888 325 ntBASIC2.02□□□□□ -2.09
SLC44A3Q8N4M1 MIR5089-201ENST00000580047 84 ntBASIC2.02□□□□□ -2.09
SLC44A3Q8N4M1 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
SLC44A3Q8N4M1 SNORA3A-201ENST00000364113 130 ntBASIC2.01□□□□□ -2.09
SLC44A3Q8N4M1 Y_RNA.410-201ENST00000383992 113 ntBASIC2.01□□□□□ -2.09
SLC44A3Q8N4M1 MIR518A2-201ENST00000384966 87 ntBASIC2.01□□□□□ -2.09
SLC44A3Q8N4M1 BTF3P4-201ENST00000418852 495 ntBASIC2.01□□□□□ -2.09
SLC44A3Q8N4M1 STAG3L5P-204ENST00000443759 179 ntBASIC2.01□□□□□ -2.09
SLC44A3Q8N4M1 PDCD5P2-201ENST00000507570 312 ntBASIC2.01□□□□□ -2.09
SLC44A3Q8N4M1 RNU5E-3P-201ENST00000515913 68 ntBASIC2.01□□□□□ -2.09
SLC44A3Q8N4M1 RNU6-113P-201ENST00000516653 101 ntBASIC2.01□□□□□ -2.09
SLC44A3Q8N4M1 MIR3126-201ENST00000577443 74 ntBASIC2.01□□□□□ -2.09
SLC44A3Q8N4M1 MIR5094-201ENST00000578766 85 ntBASIC2.01□□□□□ -2.09
SLC44A3Q8N4M1 MIR5002-201ENST00000584713 97 ntBASIC2.01□□□□□ -2.09
SLC44A3Q8N4M1 SNRPGP19-201ENST00000603826 189 ntBASIC2.01□□□□□ -2.09
SLC44A3Q8N4M1 AL670379.3-201ENST00000605040 251 ntBASIC2.01□□□□□ -2.09
SLC44A3Q8N4M1 AC134878.1-201ENST00000619901 243 ntBASIC2.01□□□□□ -2.09
SLC44A3Q8N4M1 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.01□□□□□ -2.09
SLC44A3Q8N4M1 Y_RNA.37-201ENST00000362606 108 ntBASIC2□□□□□ -2.09
SLC44A3Q8N4M1 SNORD115-28-201ENST00000363931 81 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 914.5 ms