Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 MIR7112-201ENST00000616126 65 ntBASIC2.88□□□□□ -1.95
DEPDC4Q8N2C3 AC087741.2-201ENST00000619415 172 ntBASIC2.88□□□□□ -1.95
DEPDC4Q8N2C3 MIR6841-201ENST00000637129 72 ntBASIC2.88□□□□□ -1.95
DEPDC4Q8N2C3 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
DEPDC4Q8N2C3 Y_RNA.537-201ENST00000384626 109 ntBASIC2.87□□□□□ -1.95
DEPDC4Q8N2C3 MIR526A1-201ENST00000384897 85 ntBASIC2.87□□□□□ -1.95
DEPDC4Q8N2C3 RNY4P30-201ENST00000410216 95 ntBASIC2.87□□□□□ -1.95
DEPDC4Q8N2C3 RN7SKP192-201ENST00000411291 327 ntBASIC2.87□□□□□ -1.95
DEPDC4Q8N2C3 AP004217.1-201ENST00000480579 346 ntBASIC2.87□□□□□ -1.95
DEPDC4Q8N2C3 RNU6-904P-201ENST00000516206 101 ntBASIC2.87□□□□□ -1.95
DEPDC4Q8N2C3 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
DEPDC4Q8N2C3 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
DEPDC4Q8N2C3 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
DEPDC4Q8N2C3 RNU6-816P-201ENST00000390914 107 ntBASIC2.86□□□□□ -1.95
DEPDC4Q8N2C3 RNU6-1268P-201ENST00000391214 107 ntBASIC2.86□□□□□ -1.95
DEPDC4Q8N2C3 RNU6-1239P-201ENST00000391310 107 ntBASIC2.86□□□□□ -1.95
DEPDC4Q8N2C3 RPL39P25-201ENST00000449384 154 ntBASIC2.86□□□□□ -1.95
DEPDC4Q8N2C3 RN7SL633P-201ENST00000488974 297 ntBASIC2.86□□□□□ -1.95
DEPDC4Q8N2C3 RNU6-958P-201ENST00000516995 106 ntBASIC2.86□□□□□ -1.95
DEPDC4Q8N2C3 MIR548AR-201ENST00000582191 57 ntBASIC2.86□□□□□ -1.95
DEPDC4Q8N2C3 AC243994.1-201ENST00000618627 109 ntBASIC2.86□□□□□ -1.95
DEPDC4Q8N2C3 MIR2052-201ENST00000636055 55 ntBASIC2.86□□□□□ -1.95
DEPDC4Q8N2C3 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
DEPDC4Q8N2C3 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.85□□□□□ -1.95
DEPDC4Q8N2C3 RNU6-1123P-201ENST00000362347 106 ntBASIC2.85□□□□□ -1.95
DEPDC4Q8N2C3 SNORA26.6-201ENST00000391256 115 ntBASIC2.85□□□□□ -1.95
DEPDC4Q8N2C3 RNU4-69P-201ENST00000410677 143 ntBASIC2.85□□□□□ -1.95
DEPDC4Q8N2C3 RNU7-113P-201ENST00000459273 62 ntBASIC2.85□□□□□ -1.95
DEPDC4Q8N2C3 RN7SL429P-201ENST00000479090 223 ntBASIC2.85□□□□□ -1.95
DEPDC4Q8N2C3 RN7SL489P-201ENST00000486185 223 ntBASIC2.85□□□□□ -1.95
DEPDC4Q8N2C3 RN7SL327P-201ENST00000488659 223 ntBASIC2.85□□□□□ -1.95
DEPDC4Q8N2C3 RNU6-970P-201ENST00000516312 107 ntBASIC2.85□□□□□ -1.95
DEPDC4Q8N2C3 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.85□□□□□ -1.95
DEPDC4Q8N2C3 RN7SL853P-201ENST00000617250 223 ntBASIC2.85□□□□□ -1.95
DEPDC4Q8N2C3 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
DEPDC4Q8N2C3 SNORA3A-201ENST00000364113 130 ntBASIC2.84□□□□□ -1.95
DEPDC4Q8N2C3 Y_RNA.507-201ENST00000384500 99 ntBASIC2.84□□□□□ -1.95
DEPDC4Q8N2C3 MIR590-201ENST00000385008 97 ntBASIC2.84□□□□□ -1.95
DEPDC4Q8N2C3 MIR887-201ENST00000401258 79 ntBASIC2.84□□□□□ -1.95
DEPDC4Q8N2C3 SNORD88.1-201ENST00000408684 91 ntBASIC2.84□□□□□ -1.95
DEPDC4Q8N2C3 COTL1P1-201ENST00000422309 375 ntBASIC2.84□□□□□ -1.95
DEPDC4Q8N2C3 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.84□□□□□ -1.95
DEPDC4Q8N2C3 S100A11P2-201ENST00000467589 312 ntBASIC2.84□□□□□ -1.95
DEPDC4Q8N2C3 AL020996.3-201ENST00000606617 222 ntBASIC2.84□□□□□ -1.95
DEPDC4Q8N2C3 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
DEPDC4Q8N2C3 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.96
DEPDC4Q8N2C3 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.83□□□□□ -1.96
DEPDC4Q8N2C3 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.83□□□□□ -1.96
DEPDC4Q8N2C3 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
DEPDC4Q8N2C3 SNORA22.1-201ENST00000362701 134 ntBASIC2.83□□□□□ -1.96
DEPDC4Q8N2C3 RNA5SP374-201ENST00000362939 125 ntBASIC2.83□□□□□ -1.96
DEPDC4Q8N2C3 VTRNA1-1-201ENST00000363120 99 ntBASIC2.83□□□□□ -1.96
DEPDC4Q8N2C3 RNU1-138P-201ENST00000384093 164 ntBASIC2.83□□□□□ -1.96
DEPDC4Q8N2C3 AC113410.1-201ENST00000505029 247 ntBASIC2.83□□□□□ -1.96
DEPDC4Q8N2C3 SNORA74.3-201ENST00000517108 154 ntBASIC2.83□□□□□ -1.96
DEPDC4Q8N2C3 MIR2682-201ENST00000580305 110 ntBASIC2.83□□□□□ -1.96
DEPDC4Q8N2C3 MIR3618-201ENST00000580330 88 ntBASIC2.83□□□□□ -1.96
DEPDC4Q8N2C3 MIR4791-201ENST00000607666 84 ntBASIC2.83□□□□□ -1.96
DEPDC4Q8N2C3 MIR6717-201ENST00000622747 73 ntBASIC2.83□□□□□ -1.96
DEPDC4Q8N2C3 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.83□□□□□ -1.96
DEPDC4Q8N2C3 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
DEPDC4Q8N2C3 SNORA51.10-201ENST00000384418 136 ntBASIC2.82□□□□□ -1.96
DEPDC4Q8N2C3 SNORD28B-201ENST00000390993 75 ntBASIC2.82□□□□□ -1.96
DEPDC4Q8N2C3 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.82□□□□□ -1.96
DEPDC4Q8N2C3 RNU7-45P-201ENST00000459460 63 ntBASIC2.82□□□□□ -1.96
DEPDC4Q8N2C3 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.82□□□□□ -1.96
DEPDC4Q8N2C3 SNORA31.17-201ENST00000516953 127 ntBASIC2.82□□□□□ -1.96
DEPDC4Q8N2C3 RPL12P50-201ENST00000603116 116 ntBASIC2.82□□□□□ -1.96
DEPDC4Q8N2C3 AL162274.2-201ENST00000614406 332 ntBASIC2.82□□□□□ -1.96
DEPDC4Q8N2C3 AC006386.2-201ENST00000624491 75 ntBASIC2.82□□□□□ -1.96
DEPDC4Q8N2C3 AC012005.1-201ENST00000624575 75 ntBASIC2.82□□□□□ -1.96
DEPDC4Q8N2C3 AC095038.3-201ENST00000634439 195 ntBASIC2.82□□□□□ -1.96
DEPDC4Q8N2C3 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.82□□□□□ -1.96
DEPDC4Q8N2C3 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
DEPDC4Q8N2C3 AC005336.3-201ENST00000623833 2679 ntBASIC2.81□□□□□ -1.96
DEPDC4Q8N2C3 RNU6-363P-201ENST00000362895 105 ntBASIC2.81□□□□□ -1.96
DEPDC4Q8N2C3 RNU4-36P-201ENST00000364294 144 ntBASIC2.81□□□□□ -1.96
DEPDC4Q8N2C3 snoU13.16-201ENST00000459350 104 ntBASIC2.81□□□□□ -1.96
DEPDC4Q8N2C3 RN7SL20P-201ENST00000488827 297 ntBASIC2.81□□□□□ -1.96
DEPDC4Q8N2C3 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.81□□□□□ -1.96
DEPDC4Q8N2C3 RNU7-43P-201ENST00000516554 64 ntBASIC2.81□□□□□ -1.96
DEPDC4Q8N2C3 RNU7-193P-201ENST00000516723 65 ntBASIC2.81□□□□□ -1.96
DEPDC4Q8N2C3 MIR5004-201ENST00000579078 107 ntBASIC2.81□□□□□ -1.96
DEPDC4Q8N2C3 AC103810.6-201ENST00000606708 136 ntBASIC2.81□□□□□ -1.96
DEPDC4Q8N2C3 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.81□□□□□ -1.96
DEPDC4Q8N2C3 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
DEPDC4Q8N2C3 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
DEPDC4Q8N2C3 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.8□□□□□ -1.96
DEPDC4Q8N2C3 Y_RNA.93-201ENST00000363066 109 ntBASIC2.8□□□□□ -1.96
DEPDC4Q8N2C3 Y_RNA.171-201ENST00000363760 102 ntBASIC2.8□□□□□ -1.96
DEPDC4Q8N2C3 MIR1302-4-201ENST00000408701 150 ntBASIC2.8□□□□□ -1.96
DEPDC4Q8N2C3 RPL23AP6-201ENST00000446637 472 ntBASIC2.8□□□□□ -1.96
DEPDC4Q8N2C3 RN7SL863P-201ENST00000462370 296 ntBASIC2.8□□□□□ -1.96
DEPDC4Q8N2C3 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.8□□□□□ -1.96
DEPDC4Q8N2C3 RNU6-1258P-201ENST00000516911 111 ntBASIC2.8□□□□□ -1.96
DEPDC4Q8N2C3 AC141557.1-201ENST00000540982 400 ntBASIC2.8□□□□□ -1.96
DEPDC4Q8N2C3 FAM106DP-201ENST00000586416 501 ntBASIC2.8□□□□□ -1.96
DEPDC4Q8N2C3 FAM71BP1-201ENST00000604431 523 ntBASIC2.8□□□□□ -1.96
DEPDC4Q8N2C3 AL365361.1-201ENST00000566942 3481 ntBASIC2.8□□□□□ -1.96
DEPDC4Q8N2C3 AC080100.1-201ENST00000624239 5356 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms