Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 HMGN2P23-201ENST00000456759 269 ntBASIC1.95□□□□□ -2.1
KRT78Q8N1N4 RNU6-168P-201ENST00000516189 101 ntBASIC1.95□□□□□ -2.1
KRT78Q8N1N4 RNU2-60P-201ENST00000517290 128 ntBASIC1.95□□□□□ -2.1
KRT78Q8N1N4 MIR2681-201ENST00000581814 105 ntBASIC1.95□□□□□ -2.1
KRT78Q8N1N4 AL670379.3-201ENST00000605040 251 ntBASIC1.95□□□□□ -2.1
KRT78Q8N1N4 MIR8063-201ENST00000621930 81 ntBASIC1.95□□□□□ -2.1
KRT78Q8N1N4 SNORD3E-202ENST00000627253 216 ntBASIC1.95□□□□□ -2.1
KRT78Q8N1N4 RNU6-1123P-201ENST00000362347 106 ntBASIC1.94□□□□□ -2.1
KRT78Q8N1N4 RNU6-309P-201ENST00000364573 106 ntBASIC1.94□□□□□ -2.1
KRT78Q8N1N4 RNA5SP160-201ENST00000364866 120 ntBASIC1.94□□□□□ -2.1
KRT78Q8N1N4 SNORD58C-201ENST00000365223 64 ntBASIC1.94□□□□□ -2.1
KRT78Q8N1N4 SNORD116-21-201ENST00000384507 92 ntBASIC1.94□□□□□ -2.1
KRT78Q8N1N4 AL023284.1-201ENST00000403956 276 ntBASIC1.94□□□□□ -2.1
KRT78Q8N1N4 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.94□□□□□ -2.1
KRT78Q8N1N4 RNU2-70P-201ENST00000410718 179 ntBASIC1.94□□□□□ -2.1
KRT78Q8N1N4 PGBD4P5-201ENST00000445958 426 ntBASIC1.94□□□□□ -2.1
KRT78Q8N1N4 RNU6-717P-201ENST00000459076 104 ntBASIC1.94□□□□□ -2.1
KRT78Q8N1N4 HMGN1P7-201ENST00000491722 313 ntBASIC1.94□□□□□ -2.1
KRT78Q8N1N4 Y_RNA.690-201ENST00000516603 95 ntBASIC1.94□□□□□ -2.1
KRT78Q8N1N4 AC131055.1-201ENST00000584626 316 ntBASIC1.94□□□□□ -2.1
KRT78Q8N1N4 AL591926.4-201ENST00000616895 298 ntBASIC1.94□□□□□ -2.1
KRT78Q8N1N4 AL513423.1-201ENST00000621695 132 ntBASIC1.94□□□□□ -2.1
KRT78Q8N1N4 AC092881.1-201ENST00000638218 2733 ntBASIC1.94□□□□□ -2.1
KRT78Q8N1N4 ICE2P2-201ENST00000483823 2787 ntBASIC1.93□□□□□ -2.1
KRT78Q8N1N4 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.93□□□□□ -2.1
KRT78Q8N1N4 Y_RNA.253-201ENST00000364562 112 ntBASIC1.93□□□□□ -2.1
KRT78Q8N1N4 Y_RNA.634-201ENST00000364811 113 ntBASIC1.93□□□□□ -2.1
KRT78Q8N1N4 RNA5SP138-201ENST00000365098 114 ntBASIC1.93□□□□□ -2.1
KRT78Q8N1N4 RNU6-203P-201ENST00000384038 104 ntBASIC1.93□□□□□ -2.1
KRT78Q8N1N4 SNORA67.3-201ENST00000384366 140 ntBASIC1.93□□□□□ -2.1
KRT78Q8N1N4 MIR548A1-201ENST00000385041 97 ntBASIC1.93□□□□□ -2.1
KRT78Q8N1N4 MIR548A3-201ENST00000385297 97 ntBASIC1.93□□□□□ -2.1
KRT78Q8N1N4 RNU2-55P-201ENST00000411146 174 ntBASIC1.93□□□□□ -2.1
KRT78Q8N1N4 AL445646.1-201ENST00000431784 216 ntBASIC1.93□□□□□ -2.1
KRT78Q8N1N4 HSPE1P24-201ENST00000450782 238 ntBASIC1.93□□□□□ -2.1
KRT78Q8N1N4 OR9P1P-201ENST00000496431 281 ntBASIC1.93□□□□□ -2.1
KRT78Q8N1N4 RNU6-781P-201ENST00000516377 101 ntBASIC1.93□□□□□ -2.1
KRT78Q8N1N4 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.93□□□□□ -2.1
KRT78Q8N1N4 RPL23AP91-201ENST00000569211 455 ntBASIC1.93□□□□□ -2.1
KRT78Q8N1N4 AC006254.2-201ENST00000603259 279 ntBASIC1.93□□□□□ -2.1
KRT78Q8N1N4 Y_RNA.783-201ENST00000613546 102 ntBASIC1.93□□□□□ -2.1
KRT78Q8N1N4 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.93□□□□□ -2.1
KRT78Q8N1N4 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
KRT78Q8N1N4 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.92□□□□□ -2.1
KRT78Q8N1N4 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
KRT78Q8N1N4 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRT78Q8N1N4 MIR424-201ENST00000362227 98 ntBASIC1.92□□□□□ -2.1
KRT78Q8N1N4 RNU6-1084P-201ENST00000362498 107 ntBASIC1.92□□□□□ -2.1
KRT78Q8N1N4 U8.2-201ENST00000363156 134 ntBASIC1.92□□□□□ -2.1
KRT78Q8N1N4 RNA5SP259-201ENST00000365541 109 ntBASIC1.92□□□□□ -2.1
KRT78Q8N1N4 SNORD18B-201ENST00000365659 72 ntBASIC1.92□□□□□ -2.1
KRT78Q8N1N4 RNU6-163P-201ENST00000384396 106 ntBASIC1.92□□□□□ -2.1
KRT78Q8N1N4 MIR802-201ENST00000390235 94 ntBASIC1.92□□□□□ -2.1
KRT78Q8N1N4 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
KRT78Q8N1N4 AC004965.1-201ENST00000413033 213 ntBASIC1.92□□□□□ -2.1
KRT78Q8N1N4 CALM2P4-201ENST00000430810 426 ntBASIC1.92□□□□□ -2.1
KRT78Q8N1N4 SNRPGP10-201ENST00000432323 225 ntBASIC1.92□□□□□ -2.1
KRT78Q8N1N4 AC023449.1-201ENST00000454464 154 ntBASIC1.92□□□□□ -2.1
KRT78Q8N1N4 RNU7-12P-201ENST00000516030 62 ntBASIC1.92□□□□□ -2.1
KRT78Q8N1N4 RNA5SP168-201ENST00000516642 112 ntBASIC1.92□□□□□ -2.1
KRT78Q8N1N4 DEFB122-202ENST00000569013 197 ntBASIC1.92□□□□□ -2.1
KRT78Q8N1N4 AL121890.5-201ENST00000620848 304 ntBASIC1.92□□□□□ -2.1
KRT78Q8N1N4 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRT78Q8N1N4 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.91□□□□□ -2.1
KRT78Q8N1N4 MIR450A1-201ENST00000362262 91 ntBASIC1.91□□□□□ -2.1
KRT78Q8N1N4 Y_RNA.309-201ENST00000365046 111 ntBASIC1.91□□□□□ -2.1
KRT78Q8N1N4 MIR513A1-201ENST00000385138 129 ntBASIC1.91□□□□□ -2.1
KRT78Q8N1N4 AL603914.1-201ENST00000401964 204 ntBASIC1.91□□□□□ -2.1
KRT78Q8N1N4 Y_RNA.617-201ENST00000410920 90 ntBASIC1.91□□□□□ -2.1
KRT78Q8N1N4 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
KRT78Q8N1N4 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.91□□□□□ -2.1
KRT78Q8N1N4 AC099513.1-201ENST00000490423 301 ntBASIC1.91□□□□□ -2.1
KRT78Q8N1N4 AC008834.1-201ENST00000511612 175 ntBASIC1.91□□□□□ -2.1
KRT78Q8N1N4 SNORD77.4-201ENST00000516158 81 ntBASIC1.91□□□□□ -2.1
KRT78Q8N1N4 SNORA72.7-201ENST00000516349 94 ntBASIC1.91□□□□□ -2.1
KRT78Q8N1N4 RNA5SP153-201ENST00000516498 76 ntBASIC1.91□□□□□ -2.1
KRT78Q8N1N4 AL160236.1-201ENST00000556317 195 ntBASIC1.91□□□□□ -2.1
KRT78Q8N1N4 MIR4648-201ENST00000580107 72 ntBASIC1.91□□□□□ -2.1
KRT78Q8N1N4 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.91□□□□□ -2.1
KRT78Q8N1N4 uc_338.4-201ENST00000616635 176 ntBASIC1.91□□□□□ -2.1
KRT78Q8N1N4 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.91□□□□□ -2.1
KRT78Q8N1N4 AC095038.3-201ENST00000634439 195 ntBASIC1.91□□□□□ -2.1
KRT78Q8N1N4 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
KRT78Q8N1N4 Y_RNA.796-201ENST00000364268 102 ntBASIC1.9□□□□□ -2.11
KRT78Q8N1N4 Y_RNA.799-201ENST00000364992 102 ntBASIC1.9□□□□□ -2.11
KRT78Q8N1N4 MIR660-201ENST00000385235 97 ntBASIC1.9□□□□□ -2.11
KRT78Q8N1N4 U8.16-201ENST00000391279 133 ntBASIC1.9□□□□□ -2.11
KRT78Q8N1N4 RNA5SP338-201ENST00000410495 85 ntBASIC1.9□□□□□ -2.11
KRT78Q8N1N4 SNORD11-201ENST00000459124 84 ntBASIC1.9□□□□□ -2.11
KRT78Q8N1N4 Y_RNA.651-201ENST00000459380 103 ntBASIC1.9□□□□□ -2.11
KRT78Q8N1N4 AC005908.1-201ENST00000468701 347 ntBASIC1.9□□□□□ -2.11
KRT78Q8N1N4 RN7SKP19-201ENST00000516016 252 ntBASIC1.9□□□□□ -2.11
KRT78Q8N1N4 SNORA18.4-201ENST00000516440 124 ntBASIC1.9□□□□□ -2.11
KRT78Q8N1N4 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.9□□□□□ -2.11
KRT78Q8N1N4 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.9□□□□□ -2.11
KRT78Q8N1N4 Pinc.1-201ENST00000616452 154 ntBASIC1.9□□□□□ -2.11
KRT78Q8N1N4 ZNF355P-201ENST00000427301 3216 ntBASIC1.89□□□□□ -2.11
KRT78Q8N1N4 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.89□□□□□ -2.11
KRT78Q8N1N4 Y_RNA.52-201ENST00000362760 96 ntBASIC1.89□□□□□ -2.11
KRT78Q8N1N4 RNU6-1209P-201ENST00000363655 107 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 176.5 ms