Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 MIR15B-201ENST00000385045 98 ntBASIC1.56□□□□□ -2.16
HERC6Q8IVU3 MT-TT-201ENST00000387460 66 ntBASIC1.56□□□□□ -2.16
HERC6Q8IVU3 RNU6-918P-201ENST00000391219 106 ntBASIC1.56□□□□□ -2.16
HERC6Q8IVU3 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.56□□□□□ -2.16
HERC6Q8IVU3 AC023790.1-201ENST00000482174 347 ntBASIC1.56□□□□□ -2.16
HERC6Q8IVU3 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
HERC6Q8IVU3 RPL23AP91-201ENST00000569211 455 ntBASIC1.56□□□□□ -2.16
HERC6Q8IVU3 MIR4724-201ENST00000579485 89 ntBASIC1.56□□□□□ -2.16
HERC6Q8IVU3 MIR96-201ENST00000362288 78 ntBASIC1.55□□□□□ -2.16
HERC6Q8IVU3 MIR367-201ENST00000362299 68 ntBASIC1.55□□□□□ -2.16
HERC6Q8IVU3 RNU6-381P-201ENST00000391259 108 ntBASIC1.55□□□□□ -2.16
HERC6Q8IVU3 RPS27P16-201ENST00000425758 201 ntBASIC1.55□□□□□ -2.16
HERC6Q8IVU3 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.55□□□□□ -2.16
HERC6Q8IVU3 NDUFA4P2-201ENST00000489989 244 ntBASIC1.55□□□□□ -2.16
HERC6Q8IVU3 RNA5SP480-201ENST00000516840 109 ntBASIC1.55□□□□□ -2.16
HERC6Q8IVU3 AC022559.1-201ENST00000520905 205 ntBASIC1.55□□□□□ -2.16
HERC6Q8IVU3 AL512310.8-201ENST00000550183 120 ntBASIC1.55□□□□□ -2.16
HERC6Q8IVU3 MIR3664-201ENST00000579074 99 ntBASIC1.55□□□□□ -2.16
HERC6Q8IVU3 AL021707.8-201ENST00000609428 183 ntBASIC1.55□□□□□ -2.16
HERC6Q8IVU3 MIR8065-201ENST00000620577 100 ntBASIC1.55□□□□□ -2.16
HERC6Q8IVU3 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
HERC6Q8IVU3 Y_RNA.229-201ENST00000364347 113 ntBASIC1.54□□□□□ -2.16
HERC6Q8IVU3 RNU6-442P-201ENST00000383968 104 ntBASIC1.54□□□□□ -2.16
HERC6Q8IVU3 MIR136-201ENST00000385207 82 ntBASIC1.54□□□□□ -2.16
HERC6Q8IVU3 MIR613-201ENST00000385248 95 ntBASIC1.54□□□□□ -2.16
HERC6Q8IVU3 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
HERC6Q8IVU3 RNA5SP496-201ENST00000391240 109 ntBASIC1.54□□□□□ -2.16
HERC6Q8IVU3 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.54□□□□□ -2.16
HERC6Q8IVU3 Y_RNA.644-201ENST00000459006 113 ntBASIC1.54□□□□□ -2.16
HERC6Q8IVU3 SNORD11-201ENST00000459124 84 ntBASIC1.54□□□□□ -2.16
HERC6Q8IVU3 Y_RNA.674-201ENST00000516362 113 ntBASIC1.54□□□□□ -2.16
HERC6Q8IVU3 RNU6-922P-201ENST00000516753 99 ntBASIC1.54□□□□□ -2.16
HERC6Q8IVU3 RN7SKP88-201ENST00000516847 250 ntBASIC1.54□□□□□ -2.16
HERC6Q8IVU3 MIR5688-201ENST00000580619 83 ntBASIC1.54□□□□□ -2.16
HERC6Q8IVU3 FAM106DP-201ENST00000586416 501 ntBASIC1.54□□□□□ -2.16
HERC6Q8IVU3 7SK.8-201ENST00000612110 250 ntBASIC1.54□□□□□ -2.16
HERC6Q8IVU3 7SK.11-201ENST00000615477 250 ntBASIC1.54□□□□□ -2.16
HERC6Q8IVU3 7SK.13-201ENST00000622040 250 ntBASIC1.54□□□□□ -2.16
HERC6Q8IVU3 SNORD50B-201ENST00000364995 70 ntBASIC1.53□□□□□ -2.16
HERC6Q8IVU3 MTND5P15-201ENST00000434246 349 ntBASIC1.53□□□□□ -2.16
HERC6Q8IVU3 RPL39P39-201ENST00000455840 151 ntBASIC1.53□□□□□ -2.16
HERC6Q8IVU3 AC245047.8-201ENST00000456455 284 ntBASIC1.53□□□□□ -2.16
HERC6Q8IVU3 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.53□□□□□ -2.16
HERC6Q8IVU3 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
HERC6Q8IVU3 Y_RNA.785-201ENST00000384290 109 ntBASIC1.52□□□□□ -2.17
HERC6Q8IVU3 SNORD38C-201ENST00000384381 69 ntBASIC1.52□□□□□ -2.17
HERC6Q8IVU3 MIR320A-201ENST00000385302 82 ntBASIC1.52□□□□□ -2.17
HERC6Q8IVU3 RNU6-561P-201ENST00000516222 102 ntBASIC1.52□□□□□ -2.17
HERC6Q8IVU3 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.52□□□□□ -2.17
HERC6Q8IVU3 RNU2-4P-201ENST00000606190 192 ntBASIC1.52□□□□□ -2.17
HERC6Q8IVU3 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.52□□□□□ -2.17
HERC6Q8IVU3 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
HERC6Q8IVU3 U8.1-201ENST00000362843 134 ntBASIC1.51□□□□□ -2.17
HERC6Q8IVU3 RNU4-17P-201ENST00000365598 141 ntBASIC1.51□□□□□ -2.17
HERC6Q8IVU3 MIR616-201ENST00000385293 97 ntBASIC1.51□□□□□ -2.17
HERC6Q8IVU3 RNU2-64P-201ENST00000411315 191 ntBASIC1.51□□□□□ -2.17
HERC6Q8IVU3 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.51□□□□□ -2.17
HERC6Q8IVU3 SNRPGP13-201ENST00000442212 177 ntBASIC1.51□□□□□ -2.17
HERC6Q8IVU3 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.51□□□□□ -2.17
HERC6Q8IVU3 RNU6-917P-201ENST00000516294 104 ntBASIC1.51□□□□□ -2.17
HERC6Q8IVU3 SNORA81.3-201ENST00000517283 198 ntBASIC1.51□□□□□ -2.17
HERC6Q8IVU3 AL049861.1-201ENST00000603130 150 ntBASIC1.51□□□□□ -2.17
HERC6Q8IVU3 Z83818.1-201ENST00000603584 150 ntBASIC1.51□□□□□ -2.17
HERC6Q8IVU3 AC004792.1-201ENST00000614523 137 ntBASIC1.51□□□□□ -2.17
HERC6Q8IVU3 Y_RNA.571-201ENST00000384753 98 ntBASIC1.5□□□□□ -2.17
HERC6Q8IVU3 Y_RNA.587-201ENST00000391210 103 ntBASIC1.5□□□□□ -2.17
HERC6Q8IVU3 AC015922.2-201ENST00000435593 184 ntBASIC1.5□□□□□ -2.17
HERC6Q8IVU3 AL138752.1-201ENST00000452964 351 ntBASIC1.5□□□□□ -2.17
HERC6Q8IVU3 SNRPGP8-201ENST00000454064 226 ntBASIC1.5□□□□□ -2.17
HERC6Q8IVU3 AC022709.1-201ENST00000615967 87 ntBASIC1.5□□□□□ -2.17
HERC6Q8IVU3 uc_338.4-201ENST00000616635 176 ntBASIC1.5□□□□□ -2.17
HERC6Q8IVU3 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
HERC6Q8IVU3 AL161722.3-201ENST00000605789 2983 ntBASIC1.5□□□□□ -2.17
HERC6Q8IVU3 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
HERC6Q8IVU3 Y_RNA.7-201ENST00000362352 102 ntBASIC1.49□□□□□ -2.17
HERC6Q8IVU3 Y_RNA.29-201ENST00000362570 113 ntBASIC1.49□□□□□ -2.17
HERC6Q8IVU3 RNU6-1020P-201ENST00000363684 107 ntBASIC1.49□□□□□ -2.17
HERC6Q8IVU3 RNU1-93P-201ENST00000364704 169 ntBASIC1.49□□□□□ -2.17
HERC6Q8IVU3 AL606845.1-201ENST00000404881 255 ntBASIC1.49□□□□□ -2.17
HERC6Q8IVU3 Y_RNA.793-201ENST00000411222 111 ntBASIC1.49□□□□□ -2.17
HERC6Q8IVU3 RN7SKP164-201ENST00000516138 266 ntBASIC1.49□□□□□ -2.17
HERC6Q8IVU3 RNU6-1219P-201ENST00000516143 112 ntBASIC1.49□□□□□ -2.17
HERC6Q8IVU3 Y_RNA.700-201ENST00000516806 100 ntBASIC1.49□□□□□ -2.17
HERC6Q8IVU3 CYP3A52P-201ENST00000563326 91 ntBASIC1.49□□□□□ -2.17
HERC6Q8IVU3 MIR3668-201ENST00000582138 75 ntBASIC1.49□□□□□ -2.17
HERC6Q8IVU3 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
HERC6Q8IVU3 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
HERC6Q8IVU3 RNU6-682P-201ENST00000363843 106 ntBASIC1.48□□□□□ -2.17
HERC6Q8IVU3 Y_RNA.233-201ENST00000364407 101 ntBASIC1.48□□□□□ -2.17
HERC6Q8IVU3 Y_RNA.435-201ENST00000384095 112 ntBASIC1.48□□□□□ -2.17
HERC6Q8IVU3 MT-TR-201ENST00000387439 65 ntBASIC1.48□□□□□ -2.17
HERC6Q8IVU3 SNORD72-201ENST00000390994 80 ntBASIC1.48□□□□□ -2.17
HERC6Q8IVU3 RPS29P23-201ENST00000458635 123 ntBASIC1.48□□□□□ -2.17
HERC6Q8IVU3 RNU6-947P-201ENST00000516264 106 ntBASIC1.48□□□□□ -2.17
HERC6Q8IVU3 RNU6-126P-201ENST00000516685 103 ntBASIC1.48□□□□□ -2.17
HERC6Q8IVU3 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.48□□□□□ -2.17
HERC6Q8IVU3 AP002392.1-201ENST00000537692 208 ntBASIC1.48□□□□□ -2.17
HERC6Q8IVU3 MIR4744-201ENST00000581563 82 ntBASIC1.48□□□□□ -2.17
HERC6Q8IVU3 AC008507.4-201ENST00000585464 127 ntBASIC1.48□□□□□ -2.17
HERC6Q8IVU3 AC108706.1-201ENST00000611053 297 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms