Protein–RNA interactions for Protein: Q86TS7

LINC00643, Putative UPF0730 protein encoded by LINC00643, humanhuman

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643Q86TS7 AC079248.2-201ENST00000623779 326 ntBASIC-2.52□□□□□ -2.81
LINC00643Q86TS7 Y_RNA.57-201ENST00000362806 113 ntBASIC-2.53□□□□□ -2.81
LINC00643Q86TS7 SNORD115-30-201ENST00000364117 82 ntBASIC-2.53□□□□□ -2.81
LINC00643Q86TS7 RNU6-933P-201ENST00000384424 107 ntBASIC-2.53□□□□□ -2.81
LINC00643Q86TS7 Y_RNA.495-201ENST00000384435 112 ntBASIC-2.53□□□□□ -2.81
LINC00643Q86TS7 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC-2.53□□□□□ -2.81
LINC00643Q86TS7 snoU13.19-201ENST00000459148 104 ntBASIC-2.53□□□□□ -2.81
LINC00643Q86TS7 AL133215.3-201ENST00000609801 448 ntBASIC-2.53□□□□□ -2.81
LINC00643Q86TS7 AC087588.2-201ENST00000617667 426 ntBASIC-2.53□□□□□ -2.81
LINC00643Q86TS7 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-2.54□□□□□ -2.82
LINC00643Q86TS7 MIR527-201ENST00000385244 85 ntBASIC-2.54□□□□□ -2.82
LINC00643Q86TS7 SNORA26.6-201ENST00000391256 115 ntBASIC-2.54□□□□□ -2.82
LINC00643Q86TS7 RNA5SP67-201ENST00000516422 131 ntBASIC-2.54□□□□□ -2.82
LINC00643Q86TS7 MIR3124-201ENST00000582636 67 ntBASIC-2.54□□□□□ -2.82
LINC00643Q86TS7 AC005771.1-201ENST00000585581 349 ntBASIC-2.54□□□□□ -2.82
LINC00643Q86TS7 RNU4-92P-201ENST00000363783 136 ntBASIC-2.55□□□□□ -2.82
LINC00643Q86TS7 RNU6-831P-201ENST00000384548 107 ntBASIC-2.55□□□□□ -2.82
LINC00643Q86TS7 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-2.55□□□□□ -2.82
LINC00643Q86TS7 RNU6-576P-201ENST00000390854 102 ntBASIC-2.55□□□□□ -2.82
LINC00643Q86TS7 RNU6-192P-201ENST00000391253 100 ntBASIC-2.55□□□□□ -2.82
LINC00643Q86TS7 MIR8485-201ENST00000401372 91 ntBASIC-2.55□□□□□ -2.82
LINC00643Q86TS7 Y_RNA.608-201ENST00000410647 95 ntBASIC-2.55□□□□□ -2.82
LINC00643Q86TS7 AC093783.1-201ENST00000612976 329 ntBASIC-2.55□□□□□ -2.82
LINC00643Q86TS7 Y_RNA.7-201ENST00000362352 102 ntBASIC-2.56□□□□□ -2.82
LINC00643Q86TS7 Y_RNA.121-201ENST00000363309 113 ntBASIC-2.56□□□□□ -2.82
LINC00643Q86TS7 Y_RNA.294-201ENST00000364916 102 ntBASIC-2.56□□□□□ -2.82
LINC00643Q86TS7 RNY1P13-201ENST00000365030 105 ntBASIC-2.56□□□□□ -2.82
LINC00643Q86TS7 RNU6-476P-201ENST00000384726 107 ntBASIC-2.56□□□□□ -2.82
LINC00643Q86TS7 RNU6-1001P-201ENST00000411265 100 ntBASIC-2.56□□□□□ -2.82
LINC00643Q86TS7 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-2.56□□□□□ -2.82
LINC00643Q86TS7 AC018714.1-201ENST00000605028 208 ntBASIC-2.56□□□□□ -2.82
LINC00643Q86TS7 RNU7-10P-201ENST00000607194 63 ntBASIC-2.56□□□□□ -2.82
LINC00643Q86TS7 DISC2.1-201ENST00000612827 205 ntBASIC-2.56□□□□□ -2.82
LINC00643Q86TS7 AC104010.1-201ENST00000616889 150 ntBASIC-2.56□□□□□ -2.82
LINC00643Q86TS7 RNU6-74P-201ENST00000384235 107 ntBASIC-2.57□□□□□ -2.82
LINC00643Q86TS7 RNU6-30P-201ENST00000384561 107 ntBASIC-2.57□□□□□ -2.82
LINC00643Q86TS7 MIR519E-201ENST00000385075 84 ntBASIC-2.57□□□□□ -2.82
LINC00643Q86TS7 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-2.57□□□□□ -2.82
LINC00643Q86TS7 RNU7-96P-201ENST00000459535 64 ntBASIC-2.57□□□□□ -2.82
LINC00643Q86TS7 RNU6-1114P-201ENST00000516022 107 ntBASIC-2.57□□□□□ -2.82
LINC00643Q86TS7 AL353803.5-201ENST00000599815 141 ntBASIC-2.57□□□□□ -2.82
LINC00643Q86TS7 PART1_1.1-201ENST00000611761 217 ntBASIC-2.57□□□□□ -2.82
LINC00643Q86TS7 AL607023.1-201ENST00000620045 248 ntBASIC-2.57□□□□□ -2.82
LINC00643Q86TS7 U6.109-201ENST00000636749 87 ntBASIC-2.57□□□□□ -2.82
LINC00643Q86TS7 RNU6-1125P-201ENST00000363601 107 ntBASIC-2.58□□□□□ -2.82
LINC00643Q86TS7 MIR548K-201ENST00000408406 116 ntBASIC-2.58□□□□□ -2.82
LINC00643Q86TS7 RNU6-938P-201ENST00000411285 103 ntBASIC-2.58□□□□□ -2.82
LINC00643Q86TS7 AC097635.1-201ENST00000450678 155 ntBASIC-2.58□□□□□ -2.82
LINC00643Q86TS7 Y_RNA.672-201ENST00000516289 104 ntBASIC-2.58□□□□□ -2.82
LINC00643Q86TS7 Y_RNA.757-201ENST00000578934 114 ntBASIC-2.58□□□□□ -2.82
LINC00643Q86TS7 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-2.58□□□□□ -2.82
LINC00643Q86TS7 MIR5188-201ENST00000583467 113 ntBASIC-2.58□□□□□ -2.82
LINC00643Q86TS7 AC073534.2-201ENST00000620377 381 ntBASIC-2.58□□□□□ -2.82
LINC00643Q86TS7 Y_RNA.60-201ENST00000362831 98 ntBASIC-2.59□□□□□ -2.82
LINC00643Q86TS7 Y_RNA.128-201ENST00000363391 112 ntBASIC-2.59□□□□□ -2.82
LINC00643Q86TS7 SNORD115-28-201ENST00000363931 81 ntBASIC-2.59□□□□□ -2.82
LINC00643Q86TS7 Y_RNA.571-201ENST00000384753 98 ntBASIC-2.59□□□□□ -2.82
LINC00643Q86TS7 CHEK2P4-201ENST00000450340 246 ntBASIC-2.59□□□□□ -2.82
LINC00643Q86TS7 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC-2.59□□□□□ -2.82
LINC00643Q86TS7 AL121655.1-201ENST00000605811 308 ntBASIC-2.59□□□□□ -2.82
LINC00643Q86TS7 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-2.59□□□□□ -2.82
LINC00643Q86TS7 Y_RNA.52-201ENST00000362760 96 ntBASIC-2.6□□□□□ -2.83
LINC00643Q86TS7 Y_RNA.114-201ENST00000363265 113 ntBASIC-2.6□□□□□ -2.83
LINC00643Q86TS7 Y_RNA.785-201ENST00000384290 109 ntBASIC-2.6□□□□□ -2.83
LINC00643Q86TS7 RNU6-601P-201ENST00000384540 107 ntBASIC-2.6□□□□□ -2.83
LINC00643Q86TS7 AC022028.1-201ENST00000412054 408 ntBASIC-2.6□□□□□ -2.83
LINC00643Q86TS7 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-2.6□□□□□ -2.83
LINC00643Q86TS7 CEP57L1P1-201ENST00000430943 1201 ntBASIC-2.6□□□□□ -2.83
LINC00643Q86TS7 RNU7-134P-201ENST00000458997 64 ntBASIC-2.6□□□□□ -2.83
LINC00643Q86TS7 RNU6-625P-201ENST00000459412 107 ntBASIC-2.6□□□□□ -2.83
LINC00643Q86TS7 RNU6-998P-201ENST00000515894 101 ntBASIC-2.6□□□□□ -2.83
LINC00643Q86TS7 RNU4ATAC8P-201ENST00000516196 109 ntBASIC-2.6□□□□□ -2.83
LINC00643Q86TS7 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-2.6□□□□□ -2.83
LINC00643Q86TS7 MIR6129-201ENST00000616087 109 ntBASIC-2.6□□□□□ -2.83
LINC00643Q86TS7 Y_RNA.28-201ENST00000362554 111 ntBASIC-2.61□□□□□ -2.83
LINC00643Q86TS7 SNORA72.3-201ENST00000365074 132 ntBASIC-2.61□□□□□ -2.83
LINC00643Q86TS7 Y_RNA.472-201ENST00000384322 102 ntBASIC-2.61□□□□□ -2.83
LINC00643Q86TS7 MIR652-201ENST00000385278 98 ntBASIC-2.61□□□□□ -2.83
LINC00643Q86TS7 AL031003.1-201ENST00000404229 172 ntBASIC-2.61□□□□□ -2.83
LINC00643Q86TS7 MIR4520-1-201ENST00000582609 70 ntBASIC-2.61□□□□□ -2.83
LINC00643Q86TS7 Y_RNA.68-201ENST00000362881 102 ntBASIC-2.62□□□□□ -2.83
LINC00643Q86TS7 Y_RNA.302-201ENST00000364997 102 ntBASIC-2.62□□□□□ -2.83
LINC00643Q86TS7 RNU6-1323P-201ENST00000384025 107 ntBASIC-2.62□□□□□ -2.83
LINC00643Q86TS7 Y_RNA.518-201ENST00000384552 113 ntBASIC-2.62□□□□□ -2.83
LINC00643Q86TS7 MIR29B1-201ENST00000385015 81 ntBASIC-2.62□□□□□ -2.83
LINC00643Q86TS7 MIR617-201ENST00000385030 97 ntBASIC-2.62□□□□□ -2.83
LINC00643Q86TS7 RNU2-61P-201ENST00000411069 191 ntBASIC-2.62□□□□□ -2.83
LINC00643Q86TS7 SNORD2-201ENST00000459163 69 ntBASIC-2.62□□□□□ -2.83
LINC00643Q86TS7 RNU7-116P-201ENST00000516940 62 ntBASIC-2.62□□□□□ -2.83
LINC00643Q86TS7 GPR143P-201ENST00000434155 205 ntBASIC-2.63□□□□□ -2.83
LINC00643Q86TS7 AC104850.1-201ENST00000435940 476 ntBASIC-2.63□□□□□ -2.83
LINC00643Q86TS7 RNU7-45P-201ENST00000459460 63 ntBASIC-2.63□□□□□ -2.83
LINC00643Q86TS7 AC245884.10-201ENST00000597355 337 ntBASIC-2.63□□□□□ -2.83
LINC00643Q86TS7 snoR1.1-201ENST00000628177 80 ntBASIC-2.63□□□□□ -2.83
LINC00643Q86TS7 Y_RNA.37-201ENST00000362606 108 ntBASIC-2.64□□□□□ -2.83
LINC00643Q86TS7 RNY1P2-201ENST00000364820 117 ntBASIC-2.64□□□□□ -2.83
LINC00643Q86TS7 RNU6-484P-201ENST00000384016 107 ntBASIC-2.64□□□□□ -2.83
LINC00643Q86TS7 MIR889-201ENST00000401280 79 ntBASIC-2.64□□□□□ -2.83
LINC00643Q86TS7 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-2.64□□□□□ -2.83
LINC00643Q86TS7 MIR548AG2-201ENST00000581228 64 ntBASIC-2.64□□□□□ -2.83
Retrieved 100 of 98,524 protein–RNA pairs in 230.9 ms