Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 Z83818.1-201ENST00000603584 150 ntBASIC1.5□□□□□ -2.17
SYNE3Q6ZMZ3 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
SYNE3Q6ZMZ3 Pinc.1-201ENST00000616452 154 ntBASIC1.5□□□□□ -2.17
SYNE3Q6ZMZ3 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
SYNE3Q6ZMZ3 Y_RNA.7-201ENST00000362352 102 ntBASIC1.49□□□□□ -2.17
SYNE3Q6ZMZ3 Y_RNA.66-201ENST00000362862 102 ntBASIC1.49□□□□□ -2.17
SYNE3Q6ZMZ3 Y_RNA.199-201ENST00000364014 102 ntBASIC1.49□□□□□ -2.17
SYNE3Q6ZMZ3 Y_RNA.476-201ENST00000384347 108 ntBASIC1.49□□□□□ -2.17
SYNE3Q6ZMZ3 Y_RNA.486-201ENST00000384398 107 ntBASIC1.49□□□□□ -2.17
SYNE3Q6ZMZ3 MIR516B2-201ENST00000385190 85 ntBASIC1.49□□□□□ -2.17
SYNE3Q6ZMZ3 MT-TT-201ENST00000387460 66 ntBASIC1.49□□□□□ -2.17
SYNE3Q6ZMZ3 SNORA40.6-201ENST00000391153 128 ntBASIC1.49□□□□□ -2.17
SYNE3Q6ZMZ3 AL606845.1-201ENST00000404881 255 ntBASIC1.49□□□□□ -2.17
SYNE3Q6ZMZ3 RNU4-57P-201ENST00000515980 135 ntBASIC1.49□□□□□ -2.17
SYNE3Q6ZMZ3 AC130289.1-201ENST00000577321 73 ntBASIC1.49□□□□□ -2.17
SYNE3Q6ZMZ3 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
SYNE3Q6ZMZ3 SNORD26-201ENST00000384147 75 ntBASIC1.48□□□□□ -2.17
SYNE3Q6ZMZ3 Y_RNA.552-201ENST00000384665 112 ntBASIC1.48□□□□□ -2.17
SYNE3Q6ZMZ3 MIR548A2-201ENST00000384956 97 ntBASIC1.48□□□□□ -2.17
SYNE3Q6ZMZ3 MIR802-201ENST00000390235 94 ntBASIC1.48□□□□□ -2.17
SYNE3Q6ZMZ3 RPS29P29-201ENST00000456396 171 ntBASIC1.48□□□□□ -2.17
SYNE3Q6ZMZ3 AC004223.1-201ENST00000479840 271 ntBASIC1.48□□□□□ -2.17
SYNE3Q6ZMZ3 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.48□□□□□ -2.17
SYNE3Q6ZMZ3 RNY3P16-201ENST00000516338 101 ntBASIC1.48□□□□□ -2.17
SYNE3Q6ZMZ3 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.48□□□□□ -2.17
SYNE3Q6ZMZ3 AC068338.1-201ENST00000565567 176 ntBASIC1.48□□□□□ -2.17
SYNE3Q6ZMZ3 AL157834.3-201ENST00000615543 103 ntBASIC1.48□□□□□ -2.17
SYNE3Q6ZMZ3 AL353770.2-201ENST00000620024 78 ntBASIC1.48□□□□□ -2.17
SYNE3Q6ZMZ3 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
SYNE3Q6ZMZ3 MIR337-201ENST00000362281 93 ntBASIC1.47□□□□□ -2.17
SYNE3Q6ZMZ3 Y_RNA.83-201ENST00000363005 113 ntBASIC1.47□□□□□ -2.17
SYNE3Q6ZMZ3 RNU6-888P-201ENST00000363010 101 ntBASIC1.47□□□□□ -2.17
SYNE3Q6ZMZ3 SNORD45.3-201ENST00000363836 72 ntBASIC1.47□□□□□ -2.17
SYNE3Q6ZMZ3 Y_RNA.308-201ENST00000365043 101 ntBASIC1.47□□□□□ -2.17
SYNE3Q6ZMZ3 Y_RNA.571-201ENST00000384753 98 ntBASIC1.47□□□□□ -2.17
SYNE3Q6ZMZ3 RNU6-918P-201ENST00000391219 106 ntBASIC1.47□□□□□ -2.17
SYNE3Q6ZMZ3 SNORA26-201ENST00000391286 122 ntBASIC1.47□□□□□ -2.17
SYNE3Q6ZMZ3 SNRPGP8-201ENST00000454064 226 ntBASIC1.47□□□□□ -2.17
SYNE3Q6ZMZ3 RNU7-43P-201ENST00000516554 64 ntBASIC1.47□□□□□ -2.17
SYNE3Q6ZMZ3 MIR4744-201ENST00000581563 82 ntBASIC1.47□□□□□ -2.17
SYNE3Q6ZMZ3 MIR3660-201ENST00000584845 100 ntBASIC1.47□□□□□ -2.17
SYNE3Q6ZMZ3 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
SYNE3Q6ZMZ3 Y_RNA.238-201ENST00000364441 102 ntBASIC1.46□□□□□ -2.18
SYNE3Q6ZMZ3 Y_RNA.432-201ENST00000384087 111 ntBASIC1.46□□□□□ -2.18
SYNE3Q6ZMZ3 RNU6-1054P-201ENST00000411293 104 ntBASIC1.46□□□□□ -2.18
SYNE3Q6ZMZ3 SNORD123-201ENST00000459473 70 ntBASIC1.46□□□□□ -2.18
SYNE3Q6ZMZ3 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.46□□□□□ -2.18
SYNE3Q6ZMZ3 RNU6-1299P-201ENST00000516316 100 ntBASIC1.46□□□□□ -2.18
SYNE3Q6ZMZ3 SNORD111.1-201ENST00000516421 86 ntBASIC1.46□□□□□ -2.18
SYNE3Q6ZMZ3 RNU6-197P-201ENST00000516680 100 ntBASIC1.46□□□□□ -2.18
SYNE3Q6ZMZ3 Y_RNA.700-201ENST00000516806 100 ntBASIC1.46□□□□□ -2.18
SYNE3Q6ZMZ3 AC108706.1-201ENST00000611053 297 ntBASIC1.46□□□□□ -2.18
SYNE3Q6ZMZ3 AC078938.1-201ENST00000620993 318 ntBASIC1.46□□□□□ -2.18
SYNE3Q6ZMZ3 Y_RNA.75-201ENST00000362927 97 ntBASIC1.45□□□□□ -2.18
SYNE3Q6ZMZ3 Y_RNA.274-201ENST00000364714 101 ntBASIC1.45□□□□□ -2.18
SYNE3Q6ZMZ3 Y_RNA.634-201ENST00000364811 113 ntBASIC1.45□□□□□ -2.18
SYNE3Q6ZMZ3 MIR518F-201ENST00000384973 87 ntBASIC1.45□□□□□ -2.18
SYNE3Q6ZMZ3 RNU6-578P-201ENST00000390980 103 ntBASIC1.45□□□□□ -2.18
SYNE3Q6ZMZ3 RNU6-493P-201ENST00000391321 108 ntBASIC1.45□□□□□ -2.18
SYNE3Q6ZMZ3 MIR548O-201ENST00000408583 114 ntBASIC1.45□□□□□ -2.18
SYNE3Q6ZMZ3 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.45□□□□□ -2.18
SYNE3Q6ZMZ3 RNU7-25P-201ENST00000516544 62 ntBASIC1.45□□□□□ -2.18
SYNE3Q6ZMZ3 AC007751.1-201ENST00000529260 376 ntBASIC1.45□□□□□ -2.18
SYNE3Q6ZMZ3 AC109810.1-201ENST00000534066 224 ntBASIC1.45□□□□□ -2.18
SYNE3Q6ZMZ3 AP001485.1-201ENST00000604799 199 ntBASIC1.45□□□□□ -2.18
SYNE3Q6ZMZ3 MIR26B-201ENST00000362251 77 ntBASIC1.44□□□□□ -2.18
SYNE3Q6ZMZ3 Y_RNA.164-201ENST00000363709 102 ntBASIC1.44□□□□□ -2.18
SYNE3Q6ZMZ3 RNU6-200P-201ENST00000364743 107 ntBASIC1.44□□□□□ -2.18
SYNE3Q6ZMZ3 RNU6-728P-201ENST00000365375 104 ntBASIC1.44□□□□□ -2.18
SYNE3Q6ZMZ3 Y_RNA.515-201ENST00000384535 112 ntBASIC1.44□□□□□ -2.18
SYNE3Q6ZMZ3 RNU6-939P-201ENST00000384634 107 ntBASIC1.44□□□□□ -2.18
SYNE3Q6ZMZ3 Y_RNA.547-201ENST00000384654 119 ntBASIC1.44□□□□□ -2.18
SYNE3Q6ZMZ3 RNU6-847P-201ENST00000411115 108 ntBASIC1.44□□□□□ -2.18
SYNE3Q6ZMZ3 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.44□□□□□ -2.18
SYNE3Q6ZMZ3 Y_RNA.666-201ENST00000516187 112 ntBASIC1.44□□□□□ -2.18
SYNE3Q6ZMZ3 RNU6-388P-201ENST00000517012 105 ntBASIC1.44□□□□□ -2.18
SYNE3Q6ZMZ3 RNU6-389P-201ENST00000517048 105 ntBASIC1.44□□□□□ -2.18
SYNE3Q6ZMZ3 RNU6-365P-201ENST00000517113 106 ntBASIC1.44□□□□□ -2.18
SYNE3Q6ZMZ3 CYP3A52P-201ENST00000563326 91 ntBASIC1.44□□□□□ -2.18
SYNE3Q6ZMZ3 AL096861.1-201ENST00000610899 123 ntBASIC1.44□□□□□ -2.18
SYNE3Q6ZMZ3 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.44□□□□□ -2.18
SYNE3Q6ZMZ3 Y_RNA.4-201ENST00000362333 112 ntBASIC1.43□□□□□ -2.18
SYNE3Q6ZMZ3 Y_RNA.91-201ENST00000363042 107 ntBASIC1.43□□□□□ -2.18
SYNE3Q6ZMZ3 Y_RNA.257-201ENST00000364596 102 ntBASIC1.43□□□□□ -2.18
SYNE3Q6ZMZ3 RNU6-923P-201ENST00000364753 107 ntBASIC1.43□□□□□ -2.18
SYNE3Q6ZMZ3 RNU6-275P-201ENST00000364910 107 ntBASIC1.43□□□□□ -2.18
SYNE3Q6ZMZ3 RNU2-13P-201ENST00000515909 113 ntBASIC1.43□□□□□ -2.18
SYNE3Q6ZMZ3 RN7SKP88-201ENST00000516847 250 ntBASIC1.43□□□□□ -2.18
SYNE3Q6ZMZ3 MIR4764-201ENST00000580680 88 ntBASIC1.43□□□□□ -2.18
SYNE3Q6ZMZ3 7SK.8-201ENST00000612110 250 ntBASIC1.43□□□□□ -2.18
SYNE3Q6ZMZ3 7SK.11-201ENST00000615477 250 ntBASIC1.43□□□□□ -2.18
SYNE3Q6ZMZ3 AC015726.2-201ENST00000620112 122 ntBASIC1.43□□□□□ -2.18
SYNE3Q6ZMZ3 7SK.13-201ENST00000622040 250 ntBASIC1.43□□□□□ -2.18
SYNE3Q6ZMZ3 SNORD61-201ENST00000384252 73 ntBASIC1.42□□□□□ -2.18
SYNE3Q6ZMZ3 snoU13.25-201ENST00000458945 104 ntBASIC1.42□□□□□ -2.18
SYNE3Q6ZMZ3 RNU6-561P-201ENST00000516222 102 ntBASIC1.42□□□□□ -2.18
SYNE3Q6ZMZ3 RNU6-504P-201ENST00000516568 104 ntBASIC1.42□□□□□ -2.18
SYNE3Q6ZMZ3 SNORA18.7-201ENST00000516910 131 ntBASIC1.42□□□□□ -2.18
SYNE3Q6ZMZ3 RNU2-4P-201ENST00000606190 192 ntBASIC1.42□□□□□ -2.18
SYNE3Q6ZMZ3 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms