Protein–RNA interactions for Protein: Q66K89

E4F1, Transcription factor E4F1, humanhuman

Predicted RBP Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1Q66K89 AC245884.12-201ENST00000615364 59 ntBASIC2.29□□□□□ -2.04
E4F1Q66K89 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.29□□□□□ -2.04
E4F1Q66K89 RNA5SP276-201ENST00000362580 94 ntBASIC2.28□□□□□ -2.04
E4F1Q66K89 Y_RNA.241-201ENST00000364470 117 ntBASIC2.28□□□□□ -2.04
E4F1Q66K89 Y_RNA.563-201ENST00000384707 108 ntBASIC2.28□□□□□ -2.04
E4F1Q66K89 SNX2P2-201ENST00000424553 323 ntBASIC2.28□□□□□ -2.04
E4F1Q66K89 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.28□□□□□ -2.04
E4F1Q66K89 PGBD4P5-201ENST00000445958 426 ntBASIC2.28□□□□□ -2.04
E4F1Q66K89 RNU2-19P-201ENST00000517288 84 ntBASIC2.28□□□□□ -2.04
E4F1Q66K89 AC002984.1-201ENST00000591692 448 ntBASIC2.28□□□□□ -2.04
E4F1Q66K89 SNORD3E-202ENST00000627253 216 ntBASIC2.28□□□□□ -2.04
E4F1Q66K89 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
E4F1Q66K89 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
E4F1Q66K89 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.05
E4F1Q66K89 AP000648.3-201ENST00000623539 4507 ntBASIC2.27□□□□□ -2.05
E4F1Q66K89 RNU6-215P-201ENST00000365169 102 ntBASIC2.27□□□□□ -2.05
E4F1Q66K89 Y_RNA.440-201ENST00000384120 114 ntBASIC2.27□□□□□ -2.05
E4F1Q66K89 MIR452-201ENST00000385020 85 ntBASIC2.27□□□□□ -2.05
E4F1Q66K89 SNORD23.1-201ENST00000408212 104 ntBASIC2.27□□□□□ -2.05
E4F1Q66K89 MIR1263-201ENST00000408324 86 ntBASIC2.27□□□□□ -2.05
E4F1Q66K89 RNU6-1064P-201ENST00000410626 104 ntBASIC2.27□□□□□ -2.05
E4F1Q66K89 Y_RNA.617-201ENST00000410920 90 ntBASIC2.27□□□□□ -2.05
E4F1Q66K89 AC099513.1-201ENST00000490423 301 ntBASIC2.27□□□□□ -2.05
E4F1Q66K89 SNORD33.1-201ENST00000516213 88 ntBASIC2.27□□□□□ -2.05
E4F1Q66K89 RNU7-181P-201ENST00000517234 74 ntBASIC2.27□□□□□ -2.05
E4F1Q66K89 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
E4F1Q66K89 AL513423.1-201ENST00000621695 132 ntBASIC2.27□□□□□ -2.05
E4F1Q66K89 U6.95-201ENST00000636931 70 ntBASIC2.27□□□□□ -2.05
E4F1Q66K89 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.27□□□□□ -2.05
E4F1Q66K89 AC131280.1-202ENST00000624067 4211 ntBASIC2.27□□□□□ -2.05
E4F1Q66K89 RNU6-834P-201ENST00000362367 110 ntBASIC2.26□□□□□ -2.05
E4F1Q66K89 Y_RNA.81-201ENST00000362997 102 ntBASIC2.26□□□□□ -2.05
E4F1Q66K89 RNU1-133P-201ENST00000364867 167 ntBASIC2.26□□□□□ -2.05
E4F1Q66K89 Y_RNA.351-201ENST00000365436 96 ntBASIC2.26□□□□□ -2.05
E4F1Q66K89 RNU6-476P-201ENST00000384726 107 ntBASIC2.26□□□□□ -2.05
E4F1Q66K89 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
E4F1Q66K89 AL023284.1-201ENST00000403956 276 ntBASIC2.26□□□□□ -2.05
E4F1Q66K89 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.26□□□□□ -2.05
E4F1Q66K89 AC055731.1-201ENST00000474387 401 ntBASIC2.26□□□□□ -2.05
E4F1Q66K89 RNU6-240P-201ENST00000516098 97 ntBASIC2.26□□□□□ -2.05
E4F1Q66K89 IGKV1-22-201ENST00000524313 326 ntBASIC2.26□□□□□ -2.05
E4F1Q66K89 MIR6129-201ENST00000616087 109 ntBASIC2.26□□□□□ -2.05
E4F1Q66K89 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
E4F1Q66K89 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.26□□□□□ -2.05
E4F1Q66K89 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
E4F1Q66K89 Y_RNA.366-201ENST00000365540 102 ntBASIC2.25□□□□□ -2.05
E4F1Q66K89 MIR660-201ENST00000385235 97 ntBASIC2.25□□□□□ -2.05
E4F1Q66K89 SUMO2P12-201ENST00000405924 140 ntBASIC2.25□□□□□ -2.05
E4F1Q66K89 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.25□□□□□ -2.05
E4F1Q66K89 RNU6-113P-201ENST00000516653 101 ntBASIC2.25□□□□□ -2.05
E4F1Q66K89 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.25□□□□□ -2.05
E4F1Q66K89 AC025166.1-201ENST00000612411 163 ntBASIC2.25□□□□□ -2.05
E4F1Q66K89 AL596211.1-201ENST00000569873 2277 ntBASIC2.25□□□□□ -2.05
E4F1Q66K89 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
E4F1Q66K89 RNU6-690P-201ENST00000365242 106 ntBASIC2.24□□□□□ -2.05
E4F1Q66K89 RNU6-1144P-201ENST00000384247 104 ntBASIC2.24□□□□□ -2.05
E4F1Q66K89 MIR136-201ENST00000385207 82 ntBASIC2.24□□□□□ -2.05
E4F1Q66K89 U8.17-201ENST00000391292 132 ntBASIC2.24□□□□□ -2.05
E4F1Q66K89 MIR1267-201ENST00000408723 78 ntBASIC2.24□□□□□ -2.05
E4F1Q66K89 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.24□□□□□ -2.05
E4F1Q66K89 AC008413.1-201ENST00000511864 177 ntBASIC2.24□□□□□ -2.05
E4F1Q66K89 RNU6-830P-201ENST00000516353 107 ntBASIC2.24□□□□□ -2.05
E4F1Q66K89 RNU6-919P-201ENST00000516731 104 ntBASIC2.24□□□□□ -2.05
E4F1Q66K89 RNA5SP364-201ENST00000516938 78 ntBASIC2.24□□□□□ -2.05
E4F1Q66K89 AC078899.2-201ENST00000595282 212 ntBASIC2.24□□□□□ -2.05
E4F1Q66K89 AL137067.1-201ENST00000615933 120 ntBASIC2.24□□□□□ -2.05
E4F1Q66K89 AL121890.5-201ENST00000620848 304 ntBASIC2.24□□□□□ -2.05
E4F1Q66K89 uc_338.20-201ENST00000621563 178 ntBASIC2.24□□□□□ -2.05
E4F1Q66K89 SCARNA15.3-201ENST00000626315 122 ntBASIC2.24□□□□□ -2.05
E4F1Q66K89 SCARNA4.1-201ENST00000628597 123 ntBASIC2.24□□□□□ -2.05
E4F1Q66K89 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
E4F1Q66K89 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
E4F1Q66K89 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
E4F1Q66K89 RNU6-44P-201ENST00000384045 107 ntBASIC2.23□□□□□ -2.05
E4F1Q66K89 SNORA27-201ENST00000384323 126 ntBASIC2.23□□□□□ -2.05
E4F1Q66K89 MIR548A3-201ENST00000385297 97 ntBASIC2.23□□□□□ -2.05
E4F1Q66K89 AL627390.1-201ENST00000396055 340 ntBASIC2.23□□□□□ -2.05
E4F1Q66K89 AL035461.1-201ENST00000421490 332 ntBASIC2.23□□□□□ -2.05
E4F1Q66K89 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.23□□□□□ -2.05
E4F1Q66K89 RNU7-80P-201ENST00000459562 61 ntBASIC2.23□□□□□ -2.05
E4F1Q66K89 AC090821.2-201ENST00000523552 176 ntBASIC2.23□□□□□ -2.05
E4F1Q66K89 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.23□□□□□ -2.05
E4F1Q66K89 AL670379.3-201ENST00000605040 251 ntBASIC2.23□□□□□ -2.05
E4F1Q66K89 MIR6840-201ENST00000611937 71 ntBASIC2.23□□□□□ -2.05
E4F1Q66K89 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.22□□□□□ -2.05
E4F1Q66K89 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
E4F1Q66K89 Y_RNA.346-201ENST00000365385 112 ntBASIC2.22□□□□□ -2.05
E4F1Q66K89 RNU6-429P-201ENST00000384582 108 ntBASIC2.22□□□□□ -2.05
E4F1Q66K89 MIR634-201ENST00000385208 97 ntBASIC2.22□□□□□ -2.05
E4F1Q66K89 RNU4-53P-201ENST00000410828 140 ntBASIC2.22□□□□□ -2.05
E4F1Q66K89 SNRPGP19-201ENST00000603826 189 ntBASIC2.22□□□□□ -2.05
E4F1Q66K89 AC091932.4-201ENST00000623386 200 ntBASIC2.22□□□□□ -2.05
E4F1Q66K89 AL596028.1-201ENST00000326971 197 ntBASIC2.21□□□□□ -2.06
E4F1Q66K89 MIR424-201ENST00000362227 98 ntBASIC2.21□□□□□ -2.06
E4F1Q66K89 RNY1P6-201ENST00000384193 109 ntBASIC2.21□□□□□ -2.06
E4F1Q66K89 Y_RNA.454-201ENST00000384224 113 ntBASIC2.21□□□□□ -2.06
E4F1Q66K89 Y_RNA.494-201ENST00000384432 111 ntBASIC2.21□□□□□ -2.06
E4F1Q66K89 Y_RNA.510-201ENST00000384511 114 ntBASIC2.21□□□□□ -2.06
E4F1Q66K89 MIR526A1-201ENST00000384897 85 ntBASIC2.21□□□□□ -2.06
E4F1Q66K89 RNU6-360P-201ENST00000390944 104 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 230.3 ms