Protein–RNA interactions for Protein: Q5JS37

NHLRC3, NHL repeat-containing protein 3, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3Q5JS37 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.97□□□□□ -2.25
NHLRC3Q5JS37 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.96□□□□□ -2.26
NHLRC3Q5JS37 Y_RNA.547-201ENST00000384654 119 ntBASIC0.96□□□□□ -2.26
NHLRC3Q5JS37 MIR764-201ENST00000390811 85 ntBASIC0.96□□□□□ -2.26
NHLRC3Q5JS37 RNU6-1228P-201ENST00000391014 107 ntBASIC0.96□□□□□ -2.26
NHLRC3Q5JS37 U8.17-201ENST00000391292 132 ntBASIC0.96□□□□□ -2.26
NHLRC3Q5JS37 AL606845.1-201ENST00000404881 255 ntBASIC0.96□□□□□ -2.26
NHLRC3Q5JS37 MIR548O-201ENST00000408583 114 ntBASIC0.96□□□□□ -2.26
NHLRC3Q5JS37 RNU4-62P-201ENST00000410125 130 ntBASIC0.96□□□□□ -2.26
NHLRC3Q5JS37 RNU2-55P-201ENST00000411146 174 ntBASIC0.96□□□□□ -2.26
NHLRC3Q5JS37 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.96□□□□□ -2.26
NHLRC3Q5JS37 SNRPGP8-201ENST00000454064 226 ntBASIC0.96□□□□□ -2.26
NHLRC3Q5JS37 AC007751.1-201ENST00000529260 376 ntBASIC0.96□□□□□ -2.26
NHLRC3Q5JS37 AL353770.2-201ENST00000620024 78 ntBASIC0.96□□□□□ -2.26
NHLRC3Q5JS37 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.96□□□□□ -2.26
NHLRC3Q5JS37 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
NHLRC3Q5JS37 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
NHLRC3Q5JS37 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
NHLRC3Q5JS37 RNY1-201ENST00000364228 113 ntBASIC0.95□□□□□ -2.26
NHLRC3Q5JS37 SNORA20.1-201ENST00000364790 130 ntBASIC0.95□□□□□ -2.26
NHLRC3Q5JS37 Y_RNA.363-201ENST00000365529 113 ntBASIC0.95□□□□□ -2.26
NHLRC3Q5JS37 MIR618-201ENST00000385287 98 ntBASIC0.95□□□□□ -2.26
NHLRC3Q5JS37 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.95□□□□□ -2.26
NHLRC3Q5JS37 Y_RNA.626-201ENST00000411288 95 ntBASIC0.95□□□□□ -2.26
NHLRC3Q5JS37 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.95□□□□□ -2.26
NHLRC3Q5JS37 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.95□□□□□ -2.26
NHLRC3Q5JS37 AL133373.1-201ENST00000497098 94 ntBASIC0.95□□□□□ -2.26
NHLRC3Q5JS37 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.95□□□□□ -2.26
NHLRC3Q5JS37 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.95□□□□□ -2.26
NHLRC3Q5JS37 RNU4-71P-201ENST00000516258 113 ntBASIC0.95□□□□□ -2.26
NHLRC3Q5JS37 RNU6-126P-201ENST00000516685 103 ntBASIC0.95□□□□□ -2.26
NHLRC3Q5JS37 RNU7-181P-201ENST00000517234 74 ntBASIC0.95□□□□□ -2.26
NHLRC3Q5JS37 PRELID3BP2-201ENST00000605362 201 ntBASIC0.95□□□□□ -2.26
NHLRC3Q5JS37 Y_RNA.66-201ENST00000362862 102 ntBASIC0.94□□□□□ -2.26
NHLRC3Q5JS37 SNORA25.8-201ENST00000364831 128 ntBASIC0.94□□□□□ -2.26
NHLRC3Q5JS37 Y_RNA.308-201ENST00000365043 101 ntBASIC0.94□□□□□ -2.26
NHLRC3Q5JS37 SNORD24-201ENST00000383884 75 ntBASIC0.94□□□□□ -2.26
NHLRC3Q5JS37 SNORD61-201ENST00000384252 73 ntBASIC0.94□□□□□ -2.26
NHLRC3Q5JS37 MIR548A2-201ENST00000384956 97 ntBASIC0.94□□□□□ -2.26
NHLRC3Q5JS37 Y_RNA.622-201ENST00000411091 108 ntBASIC0.94□□□□□ -2.26
NHLRC3Q5JS37 OR2A41P-201ENST00000473586 105 ntBASIC0.94□□□□□ -2.26
NHLRC3Q5JS37 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.94□□□□□ -2.26
NHLRC3Q5JS37 SNORA31.4-201ENST00000516049 129 ntBASIC0.94□□□□□ -2.26
NHLRC3Q5JS37 RNU6-561P-201ENST00000516222 102 ntBASIC0.94□□□□□ -2.26
NHLRC3Q5JS37 RNU6-1299P-201ENST00000516316 100 ntBASIC0.94□□□□□ -2.26
NHLRC3Q5JS37 AP003716.2-201ENST00000528260 108 ntBASIC0.94□□□□□ -2.26
NHLRC3Q5JS37 AC097639.2-201ENST00000603159 172 ntBASIC0.94□□□□□ -2.26
NHLRC3Q5JS37 AL022345.2-201ENST00000606307 135 ntBASIC0.94□□□□□ -2.26
NHLRC3Q5JS37 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.93□□□□□ -2.26
NHLRC3Q5JS37 RNU6-888P-201ENST00000363010 101 ntBASIC0.93□□□□□ -2.26
NHLRC3Q5JS37 Y_RNA.91-201ENST00000363042 107 ntBASIC0.93□□□□□ -2.26
NHLRC3Q5JS37 SNORD45.3-201ENST00000363836 72 ntBASIC0.93□□□□□ -2.26
NHLRC3Q5JS37 Y_RNA.634-201ENST00000364811 113 ntBASIC0.93□□□□□ -2.26
NHLRC3Q5JS37 Y_RNA.432-201ENST00000384087 111 ntBASIC0.93□□□□□ -2.26
NHLRC3Q5JS37 SNORA25-201ENST00000384384 134 ntBASIC0.93□□□□□ -2.26
NHLRC3Q5JS37 MIR518F-201ENST00000384973 87 ntBASIC0.93□□□□□ -2.26
NHLRC3Q5JS37 RNU6-910P-201ENST00000390844 107 ntBASIC0.93□□□□□ -2.26
NHLRC3Q5JS37 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.93□□□□□ -2.26
NHLRC3Q5JS37 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.93□□□□□ -2.26
NHLRC3Q5JS37 RPS26P48-201ENST00000491713 339 ntBASIC0.93□□□□□ -2.26
NHLRC3Q5JS37 RNU2-13P-201ENST00000515909 113 ntBASIC0.93□□□□□ -2.26
NHLRC3Q5JS37 RNA5SP153-201ENST00000516498 76 ntBASIC0.93□□□□□ -2.26
NHLRC3Q5JS37 RNU6-365P-201ENST00000517113 106 ntBASIC0.93□□□□□ -2.26
NHLRC3Q5JS37 AC019288.1-201ENST00000557918 224 ntBASIC0.93□□□□□ -2.26
NHLRC3Q5JS37 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.93□□□□□ -2.26
NHLRC3Q5JS37 AC027335.2-201ENST00000624030 375 ntBASIC0.93□□□□□ -2.26
NHLRC3Q5JS37 AC008133.2-201ENST00000624540 351 ntBASIC0.93□□□□□ -2.26
NHLRC3Q5JS37 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.92□□□□□ -2.26
NHLRC3Q5JS37 RNU6-103P-201ENST00000363686 107 ntBASIC0.92□□□□□ -2.26
NHLRC3Q5JS37 SNORD115-28-201ENST00000363931 81 ntBASIC0.92□□□□□ -2.26
NHLRC3Q5JS37 MIR570-201ENST00000384917 97 ntBASIC0.92□□□□□ -2.26
NHLRC3Q5JS37 RNU6-493P-201ENST00000391321 108 ntBASIC0.92□□□□□ -2.26
NHLRC3Q5JS37 AC108210.2-201ENST00000503681 201 ntBASIC0.92□□□□□ -2.26
NHLRC3Q5JS37 SNORD79.1-201ENST00000516069 84 ntBASIC0.92□□□□□ -2.26
NHLRC3Q5JS37 RNU6-693P-201ENST00000516134 107 ntBASIC0.92□□□□□ -2.26
NHLRC3Q5JS37 RNU6-504P-201ENST00000516568 104 ntBASIC0.92□□□□□ -2.26
NHLRC3Q5JS37 SNORA70.22-201ENST00000517160 124 ntBASIC0.92□□□□□ -2.26
NHLRC3Q5JS37 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
NHLRC3Q5JS37 MIR4308-201ENST00000580634 81 ntBASIC0.92□□□□□ -2.26
NHLRC3Q5JS37 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
NHLRC3Q5JS37 Y_RNA.7-201ENST00000362352 102 ntBASIC0.91□□□□□ -2.26
NHLRC3Q5JS37 RNA5SP264-201ENST00000363115 107 ntBASIC0.91□□□□□ -2.26
NHLRC3Q5JS37 RNA5SP48-201ENST00000363969 126 ntBASIC0.91□□□□□ -2.26
NHLRC3Q5JS37 Y_RNA.199-201ENST00000364014 102 ntBASIC0.91□□□□□ -2.26
NHLRC3Q5JS37 RNU6-923P-201ENST00000364753 107 ntBASIC0.91□□□□□ -2.26
NHLRC3Q5JS37 SNORA1.2-201ENST00000365189 134 ntBASIC0.91□□□□□ -2.26
NHLRC3Q5JS37 Y_RNA.370-201ENST00000365589 108 ntBASIC0.91□□□□□ -2.26
NHLRC3Q5JS37 SNORA26-201ENST00000391286 122 ntBASIC0.91□□□□□ -2.26
NHLRC3Q5JS37 RNU2-70P-201ENST00000410718 179 ntBASIC0.91□□□□□ -2.26
NHLRC3Q5JS37 RNU6-938P-201ENST00000411285 103 ntBASIC0.91□□□□□ -2.26
NHLRC3Q5JS37 AC015712.3-201ENST00000559380 164 ntBASIC0.91□□□□□ -2.26
NHLRC3Q5JS37 MIR4744-201ENST00000581563 82 ntBASIC0.91□□□□□ -2.26
NHLRC3Q5JS37 MIR4251-201ENST00000635819 61 ntBASIC0.91□□□□□ -2.26
NHLRC3Q5JS37 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.91□□□□□ -2.26
NHLRC3Q5JS37 Y_RNA.37-201ENST00000362606 108 ntBASIC0.9□□□□□ -2.27
NHLRC3Q5JS37 SNORA25.3-201ENST00000363205 127 ntBASIC0.9□□□□□ -2.27
NHLRC3Q5JS37 Y_RNA.238-201ENST00000364441 102 ntBASIC0.9□□□□□ -2.27
NHLRC3Q5JS37 RNU6-728P-201ENST00000365375 104 ntBASIC0.9□□□□□ -2.27
NHLRC3Q5JS37 Y_RNA.401-201ENST00000383965 117 ntBASIC0.9□□□□□ -2.27
NHLRC3Q5JS37 Y_RNA.489-201ENST00000384410 101 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 171.8 ms