Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 AC079140.2-201ENST00000506193 142 ntBASIC1.29□□□□□ -2.2
SNAI3Q3KNW1 RNA5SP445-201ENST00000515889 115 ntBASIC1.29□□□□□ -2.2
SNAI3Q3KNW1 SNORD116-25-201ENST00000516517 92 ntBASIC1.29□□□□□ -2.2
SNAI3Q3KNW1 RNU6-365P-201ENST00000517113 106 ntBASIC1.29□□□□□ -2.2
SNAI3Q3KNW1 SNORD53B-201ENST00000577887 78 ntBASIC1.29□□□□□ -2.2
SNAI3Q3KNW1 MIR3133-201ENST00000583157 78 ntBASIC1.29□□□□□ -2.2
SNAI3Q3KNW1 DNAJC19P2-201ENST00000593340 302 ntBASIC1.29□□□□□ -2.2
SNAI3Q3KNW1 Y_RNA.778-201ENST00000620203 90 ntBASIC1.29□□□□□ -2.2
SNAI3Q3KNW1 AL513423.1-201ENST00000621695 132 ntBASIC1.29□□□□□ -2.2
SNAI3Q3KNW1 MTND1P7-201ENST00000632801 297 ntBASIC1.29□□□□□ -2.2
SNAI3Q3KNW1 MIR302D-201ENST00000362275 68 ntBASIC1.28□□□□□ -2.2
SNAI3Q3KNW1 RNU6-833P-201ENST00000363486 107 ntBASIC1.28□□□□□ -2.2
SNAI3Q3KNW1 RNU6-268P-201ENST00000364174 107 ntBASIC1.28□□□□□ -2.2
SNAI3Q3KNW1 SNORD24-201ENST00000383884 75 ntBASIC1.28□□□□□ -2.2
SNAI3Q3KNW1 Y_RNA.393-201ENST00000383936 102 ntBASIC1.28□□□□□ -2.2
SNAI3Q3KNW1 Y_RNA.400-201ENST00000383963 111 ntBASIC1.28□□□□□ -2.2
SNAI3Q3KNW1 RNU6-442P-201ENST00000383968 104 ntBASIC1.28□□□□□ -2.2
SNAI3Q3KNW1 SNORD61-201ENST00000384252 73 ntBASIC1.28□□□□□ -2.2
SNAI3Q3KNW1 Y_RNA.521-201ENST00000384560 114 ntBASIC1.28□□□□□ -2.2
SNAI3Q3KNW1 RNU6-768P-201ENST00000384683 107 ntBASIC1.28□□□□□ -2.2
SNAI3Q3KNW1 AL354695.1-201ENST00000427935 228 ntBASIC1.28□□□□□ -2.2
SNAI3Q3KNW1 HMGN2P32-201ENST00000444648 269 ntBASIC1.28□□□□□ -2.2
SNAI3Q3KNW1 RNU7-34P-201ENST00000459394 64 ntBASIC1.28□□□□□ -2.2
SNAI3Q3KNW1 Y_RNA.666-201ENST00000516187 112 ntBASIC1.28□□□□□ -2.2
SNAI3Q3KNW1 RNU6-504P-201ENST00000516568 104 ntBASIC1.28□□□□□ -2.2
SNAI3Q3KNW1 Y_RNA.703-201ENST00000516846 111 ntBASIC1.28□□□□□ -2.2
SNAI3Q3KNW1 RNU6-548P-201ENST00000517083 115 ntBASIC1.28□□□□□ -2.2
SNAI3Q3KNW1 MIR3646-201ENST00000578301 84 ntBASIC1.28□□□□□ -2.2
SNAI3Q3KNW1 MIR3937-201ENST00000580135 106 ntBASIC1.28□□□□□ -2.2
SNAI3Q3KNW1 AL645939.4-201ENST00000604495 135 ntBASIC1.28□□□□□ -2.2
SNAI3Q3KNW1 MIR3658-201ENST00000636291 56 ntBASIC1.28□□□□□ -2.2
SNAI3Q3KNW1 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.28□□□□□ -2.21
SNAI3Q3KNW1 RNU6-888P-201ENST00000363010 101 ntBASIC1.27□□□□□ -2.21
SNAI3Q3KNW1 RNU6-60P-201ENST00000364792 103 ntBASIC1.27□□□□□ -2.21
SNAI3Q3KNW1 RNU6-163P-201ENST00000384396 106 ntBASIC1.27□□□□□ -2.21
SNAI3Q3KNW1 MIR194-1-201ENST00000384892 85 ntBASIC1.27□□□□□ -2.21
SNAI3Q3KNW1 SNORA67.6-201ENST00000391093 99 ntBASIC1.27□□□□□ -2.21
SNAI3Q3KNW1 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.27□□□□□ -2.21
SNAI3Q3KNW1 RPS27P16-201ENST00000425758 201 ntBASIC1.27□□□□□ -2.21
SNAI3Q3KNW1 AC245517.4-201ENST00000448601 281 ntBASIC1.27□□□□□ -2.21
SNAI3Q3KNW1 RNU7-12P-201ENST00000516030 62 ntBASIC1.27□□□□□ -2.21
SNAI3Q3KNW1 RNU6-346P-201ENST00000516288 111 ntBASIC1.27□□□□□ -2.21
SNAI3Q3KNW1 RNU6-902P-201ENST00000517212 91 ntBASIC1.27□□□□□ -2.21
SNAI3Q3KNW1 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
SNAI3Q3KNW1 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.27□□□□□ -2.21
SNAI3Q3KNW1 AL121890.5-201ENST00000620848 304 ntBASIC1.27□□□□□ -2.21
SNAI3Q3KNW1 RNU1-42P-201ENST00000364033 160 ntBASIC1.26□□□□□ -2.21
SNAI3Q3KNW1 RNU6-151P-201ENST00000364158 107 ntBASIC1.26□□□□□ -2.21
SNAI3Q3KNW1 Y_RNA.215-201ENST00000364204 112 ntBASIC1.26□□□□□ -2.21
SNAI3Q3KNW1 MIR548A2-201ENST00000384956 97 ntBASIC1.26□□□□□ -2.21
SNAI3Q3KNW1 MIR660-201ENST00000385235 97 ntBASIC1.26□□□□□ -2.21
SNAI3Q3KNW1 MIR802-201ENST00000390235 94 ntBASIC1.26□□□□□ -2.21
SNAI3Q3KNW1 MIR764-201ENST00000390811 85 ntBASIC1.26□□□□□ -2.21
SNAI3Q3KNW1 AL161935.2-201ENST00000414627 60 ntBASIC1.26□□□□□ -2.21
SNAI3Q3KNW1 AL591806.2-201ENST00000433122 173 ntBASIC1.26□□□□□ -2.21
SNAI3Q3KNW1 SNRPGP13-201ENST00000442212 177 ntBASIC1.26□□□□□ -2.21
SNAI3Q3KNW1 PGBD4P5-201ENST00000445958 426 ntBASIC1.26□□□□□ -2.21
SNAI3Q3KNW1 AL392103.1-201ENST00000447000 198 ntBASIC1.26□□□□□ -2.21
SNAI3Q3KNW1 SNORA31.24-201ENST00000517232 57 ntBASIC1.26□□□□□ -2.21
SNAI3Q3KNW1 AC007751.1-201ENST00000529260 376 ntBASIC1.26□□□□□ -2.21
SNAI3Q3KNW1 MIR6844-201ENST00000637122 62 ntBASIC1.26□□□□□ -2.21
SNAI3Q3KNW1 AP000648.3-201ENST00000623539 4507 ntBASIC1.26□□□□□ -2.21
SNAI3Q3KNW1 SNORA25.7-201ENST00000364375 127 ntBASIC1.25□□□□□ -2.21
SNAI3Q3KNW1 RNU6-1082P-201ENST00000364574 107 ntBASIC1.25□□□□□ -2.21
SNAI3Q3KNW1 RNU4-11P-201ENST00000365287 132 ntBASIC1.25□□□□□ -2.21
SNAI3Q3KNW1 SNORA1-201ENST00000384107 130 ntBASIC1.25□□□□□ -2.21
SNAI3Q3KNW1 RNU6-187P-201ENST00000384139 106 ntBASIC1.25□□□□□ -2.21
SNAI3Q3KNW1 MIR518F-201ENST00000384973 87 ntBASIC1.25□□□□□ -2.21
SNAI3Q3KNW1 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
SNAI3Q3KNW1 MIR891A-201ENST00000401237 79 ntBASIC1.25□□□□□ -2.21
SNAI3Q3KNW1 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.25□□□□□ -2.21
SNAI3Q3KNW1 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.25□□□□□ -2.21
SNAI3Q3KNW1 AC093850.1-201ENST00000454121 251 ntBASIC1.25□□□□□ -2.21
SNAI3Q3KNW1 RNU6-693P-201ENST00000516134 107 ntBASIC1.25□□□□□ -2.21
SNAI3Q3KNW1 SNORD3E-202ENST00000627253 216 ntBASIC1.25□□□□□ -2.21
SNAI3Q3KNW1 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.25□□□□□ -2.21
SNAI3Q3KNW1 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.25□□□□□ -2.21
SNAI3Q3KNW1 AL161722.3-201ENST00000605789 2983 ntBASIC1.25□□□□□ -2.21
SNAI3Q3KNW1 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.24□□□□□ -2.21
SNAI3Q3KNW1 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
SNAI3Q3KNW1 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
SNAI3Q3KNW1 RNU6-1123P-201ENST00000362347 106 ntBASIC1.24□□□□□ -2.21
SNAI3Q3KNW1 RNU6-1336P-201ENST00000383886 109 ntBASIC1.24□□□□□ -2.21
SNAI3Q3KNW1 Y_RNA.547-201ENST00000384654 119 ntBASIC1.24□□□□□ -2.21
SNAI3Q3KNW1 SNORA75.5-201ENST00000391291 81 ntBASIC1.24□□□□□ -2.21
SNAI3Q3KNW1 MIR548O-201ENST00000408583 114 ntBASIC1.24□□□□□ -2.21
SNAI3Q3KNW1 RNU6-588P-201ENST00000410281 105 ntBASIC1.24□□□□□ -2.21
SNAI3Q3KNW1 AC004965.1-201ENST00000413033 213 ntBASIC1.24□□□□□ -2.21
SNAI3Q3KNW1 AC015922.2-201ENST00000435593 184 ntBASIC1.24□□□□□ -2.21
SNAI3Q3KNW1 AC027119.1-201ENST00000440877 241 ntBASIC1.24□□□□□ -2.21
SNAI3Q3KNW1 RNU6-830P-201ENST00000516353 107 ntBASIC1.24□□□□□ -2.21
SNAI3Q3KNW1 RNA5SP61-201ENST00000516453 100 ntBASIC1.24□□□□□ -2.21
SNAI3Q3KNW1 RNU7-25P-201ENST00000516544 62 ntBASIC1.24□□□□□ -2.21
SNAI3Q3KNW1 RNU6-1270P-201ENST00000517128 108 ntBASIC1.24□□□□□ -2.21
SNAI3Q3KNW1 AC090142.3-201ENST00000519012 385 ntBASIC1.24□□□□□ -2.21
SNAI3Q3KNW1 AC015688.6-201ENST00000577737 104 ntBASIC1.24□□□□□ -2.21
SNAI3Q3KNW1 MIR548X2-201ENST00000579776 100 ntBASIC1.24□□□□□ -2.21
SNAI3Q3KNW1 MIR4303-201ENST00000581299 66 ntBASIC1.24□□□□□ -2.21
SNAI3Q3KNW1 AL365205.2-201ENST00000594586 68 ntBASIC1.24□□□□□ -2.21
SNAI3Q3KNW1 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 179.5 ms