Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 Y_RNA.700-201ENST00000516806 100 ntBASIC1.47□□□□□ -2.17
CCDC96Q2M329 RNU6-453P-201ENST00000516819 85 ntBASIC1.47□□□□□ -2.17
CCDC96Q2M329 Z83818.1-201ENST00000603584 150 ntBASIC1.47□□□□□ -2.17
CCDC96Q2M329 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
CCDC96Q2M329 Y_RNA.238-201ENST00000364441 102 ntBASIC1.46□□□□□ -2.18
CCDC96Q2M329 Y_RNA.308-201ENST00000365043 101 ntBASIC1.46□□□□□ -2.18
CCDC96Q2M329 RNU6-1318P-201ENST00000365389 103 ntBASIC1.46□□□□□ -2.18
CCDC96Q2M329 Y_RNA.785-201ENST00000384290 109 ntBASIC1.46□□□□□ -2.18
CCDC96Q2M329 MIR653-201ENST00000385279 96 ntBASIC1.46□□□□□ -2.18
CCDC96Q2M329 SNORD72-201ENST00000390994 80 ntBASIC1.46□□□□□ -2.18
CCDC96Q2M329 RNU6-1228P-201ENST00000391014 107 ntBASIC1.46□□□□□ -2.18
CCDC96Q2M329 RPS29P29-201ENST00000456396 171 ntBASIC1.46□□□□□ -2.18
CCDC96Q2M329 RNU7-40P-201ENST00000516397 64 ntBASIC1.46□□□□□ -2.18
CCDC96Q2M329 Y_RNA.714-201ENST00000517065 90 ntBASIC1.46□□□□□ -2.18
CCDC96Q2M329 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.46□□□□□ -2.18
CCDC96Q2M329 Y_RNA.7-201ENST00000362352 102 ntBASIC1.45□□□□□ -2.18
CCDC96Q2M329 RNA5SP327-201ENST00000362494 101 ntBASIC1.45□□□□□ -2.18
CCDC96Q2M329 RNU6-103P-201ENST00000363686 107 ntBASIC1.45□□□□□ -2.18
CCDC96Q2M329 snoU2-30.1-201ENST00000365012 70 ntBASIC1.45□□□□□ -2.18
CCDC96Q2M329 Y_RNA.336-201ENST00000365307 109 ntBASIC1.45□□□□□ -2.18
CCDC96Q2M329 RNU6-53P-201ENST00000365367 106 ntBASIC1.45□□□□□ -2.18
CCDC96Q2M329 RNU6-47P-201ENST00000383866 107 ntBASIC1.45□□□□□ -2.18
CCDC96Q2M329 RNU6-484P-201ENST00000384016 107 ntBASIC1.45□□□□□ -2.18
CCDC96Q2M329 MT-TT-201ENST00000387460 66 ntBASIC1.45□□□□□ -2.18
CCDC96Q2M329 RNU6-493P-201ENST00000391321 108 ntBASIC1.45□□□□□ -2.18
CCDC96Q2M329 RNU2-55P-201ENST00000411146 174 ntBASIC1.45□□□□□ -2.18
CCDC96Q2M329 AC068338.1-201ENST00000565567 176 ntBASIC1.45□□□□□ -2.18
CCDC96Q2M329 AL049861.1-201ENST00000603130 150 ntBASIC1.45□□□□□ -2.18
CCDC96Q2M329 AC097639.2-201ENST00000603159 172 ntBASIC1.45□□□□□ -2.18
CCDC96Q2M329 MIR8070-201ENST00000616510 88 ntBASIC1.45□□□□□ -2.18
CCDC96Q2M329 SNORD3E-202ENST00000627253 216 ntBASIC1.45□□□□□ -2.18
CCDC96Q2M329 RNU6-923P-201ENST00000364753 107 ntBASIC1.44□□□□□ -2.18
CCDC96Q2M329 Y_RNA.297-201ENST00000364950 91 ntBASIC1.44□□□□□ -2.18
CCDC96Q2M329 Y_RNA.571-201ENST00000384753 98 ntBASIC1.44□□□□□ -2.18
CCDC96Q2M329 MIR891A-201ENST00000401237 79 ntBASIC1.44□□□□□ -2.18
CCDC96Q2M329 MLLT10P1-201ENST00000418346 262 ntBASIC1.44□□□□□ -2.18
CCDC96Q2M329 PIGPP3-201ENST00000425307 415 ntBASIC1.44□□□□□ -2.18
CCDC96Q2M329 AC108059.2-201ENST00000434626 151 ntBASIC1.44□□□□□ -2.18
CCDC96Q2M329 HMGN2P32-201ENST00000444648 269 ntBASIC1.44□□□□□ -2.18
CCDC96Q2M329 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.44□□□□□ -2.18
CCDC96Q2M329 RNU7-12P-201ENST00000516030 62 ntBASIC1.44□□□□□ -2.18
CCDC96Q2M329 RNU7-149P-201ENST00000516739 59 ntBASIC1.44□□□□□ -2.18
CCDC96Q2M329 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.44□□□□□ -2.18
CCDC96Q2M329 AC006441.5-201ENST00000612680 209 ntBASIC1.44□□□□□ -2.18
CCDC96Q2M329 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
CCDC96Q2M329 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
CCDC96Q2M329 MIR526A1-201ENST00000384897 85 ntBASIC1.43□□□□□ -2.18
CCDC96Q2M329 AL606845.1-201ENST00000404881 255 ntBASIC1.43□□□□□ -2.18
CCDC96Q2M329 RNU4-43P-201ENST00000410628 137 ntBASIC1.43□□□□□ -2.18
CCDC96Q2M329 SNRPGP8-201ENST00000454064 226 ntBASIC1.43□□□□□ -2.18
CCDC96Q2M329 Y_RNA.644-201ENST00000459006 113 ntBASIC1.43□□□□□ -2.18
CCDC96Q2M329 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.43□□□□□ -2.18
CCDC96Q2M329 Y_RNA.674-201ENST00000516362 113 ntBASIC1.43□□□□□ -2.18
CCDC96Q2M329 MIR4778-201ENST00000577635 80 ntBASIC1.43□□□□□ -2.18
CCDC96Q2M329 MIR4662B-201ENST00000579498 81 ntBASIC1.43□□□□□ -2.18
CCDC96Q2M329 MIR4744-201ENST00000581563 82 ntBASIC1.43□□□□□ -2.18
CCDC96Q2M329 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
CCDC96Q2M329 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
CCDC96Q2M329 RNU6-199P-201ENST00000362954 107 ntBASIC1.42□□□□□ -2.18
CCDC96Q2M329 Y_RNA.242-201ENST00000364473 110 ntBASIC1.42□□□□□ -2.18
CCDC96Q2M329 RNU6-163P-201ENST00000384396 106 ntBASIC1.42□□□□□ -2.18
CCDC96Q2M329 Y_RNA.587-201ENST00000391210 103 ntBASIC1.42□□□□□ -2.18
CCDC96Q2M329 AC093850.1-201ENST00000454121 251 ntBASIC1.42□□□□□ -2.18
CCDC96Q2M329 RNU6-917P-201ENST00000516294 104 ntBASIC1.42□□□□□ -2.18
CCDC96Q2M329 RNU6-1007P-201ENST00000516586 107 ntBASIC1.42□□□□□ -2.18
CCDC96Q2M329 AC108706.1-201ENST00000611053 297 ntBASIC1.42□□□□□ -2.18
CCDC96Q2M329 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.42□□□□□ -2.18
CCDC96Q2M329 Y_RNA.75-201ENST00000362927 97 ntBASIC1.41□□□□□ -2.18
CCDC96Q2M329 RNU6-1020P-201ENST00000363684 107 ntBASIC1.41□□□□□ -2.18
CCDC96Q2M329 SNORD14E-201ENST00000364009 85 ntBASIC1.41□□□□□ -2.18
CCDC96Q2M329 RNU6-268P-201ENST00000364174 107 ntBASIC1.41□□□□□ -2.18
CCDC96Q2M329 RNU6-442P-201ENST00000383968 104 ntBASIC1.41□□□□□ -2.18
CCDC96Q2M329 Y_RNA.486-201ENST00000384398 107 ntBASIC1.41□□□□□ -2.18
CCDC96Q2M329 RNU6-578P-201ENST00000390980 103 ntBASIC1.41□□□□□ -2.18
CCDC96Q2M329 RNU2-64P-201ENST00000411315 191 ntBASIC1.41□□□□□ -2.18
CCDC96Q2M329 AL138752.1-201ENST00000452964 351 ntBASIC1.41□□□□□ -2.18
CCDC96Q2M329 AC023449.1-201ENST00000454464 154 ntBASIC1.41□□□□□ -2.18
CCDC96Q2M329 RNU7-120P-201ENST00000459334 63 ntBASIC1.41□□□□□ -2.18
CCDC96Q2M329 AC092991.1-201ENST00000477176 376 ntBASIC1.41□□□□□ -2.18
CCDC96Q2M329 RNU6-561P-201ENST00000516222 102 ntBASIC1.41□□□□□ -2.18
CCDC96Q2M329 RNU6-830P-201ENST00000516353 107 ntBASIC1.41□□□□□ -2.18
CCDC96Q2M329 RNA5SP153-201ENST00000516498 76 ntBASIC1.41□□□□□ -2.18
CCDC96Q2M329 RNU6-126P-201ENST00000516685 103 ntBASIC1.41□□□□□ -2.18
CCDC96Q2M329 AC090142.3-201ENST00000519012 385 ntBASIC1.41□□□□□ -2.18
CCDC96Q2M329 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
CCDC96Q2M329 AL513534.2-201ENST00000603836 250 ntBASIC1.41□□□□□ -2.18
CCDC96Q2M329 RNU2-4P-201ENST00000606190 192 ntBASIC1.41□□□□□ -2.18
CCDC96Q2M329 AC090425.1-201ENST00000610007 140 ntBASIC1.41□□□□□ -2.18
CCDC96Q2M329 RNU6-1084P-201ENST00000362498 107 ntBASIC1.4□□□□□ -2.19
CCDC96Q2M329 SNORA2.2-201ENST00000365473 135 ntBASIC1.4□□□□□ -2.19
CCDC96Q2M329 MIR452-201ENST00000385020 85 ntBASIC1.4□□□□□ -2.19
CCDC96Q2M329 AC015922.2-201ENST00000435593 184 ntBASIC1.4□□□□□ -2.19
CCDC96Q2M329 AC109810.1-201ENST00000534066 224 ntBASIC1.4□□□□□ -2.19
CCDC96Q2M329 AC090049.2-201ENST00000550377 109 ntBASIC1.4□□□□□ -2.19
CCDC96Q2M329 Pinc.1-201ENST00000616452 154 ntBASIC1.4□□□□□ -2.19
CCDC96Q2M329 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.39□□□□□ -2.19
CCDC96Q2M329 Y_RNA.29-201ENST00000362570 113 ntBASIC1.39□□□□□ -2.19
CCDC96Q2M329 Y_RNA.66-201ENST00000362862 102 ntBASIC1.39□□□□□ -2.19
CCDC96Q2M329 SNORD45.3-201ENST00000363836 72 ntBASIC1.39□□□□□ -2.19
CCDC96Q2M329 Y_RNA.226-201ENST00000364337 114 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms